RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 NDUFS5O43920 106 aa7.72□□□□□ -1.17
CDH1-210ENST00000566612 PRLHP81277 87 aa7.72□□□□□ -1.17
CDH1-210ENST00000566612 LINC00167Q96N53 147 aa7.72□□□□□ -1.17
CDH1-210ENST00000566612 BAHCC1Q9P281 2608 aa7.72□□□□□ -1.17
CDH1-210ENST00000566612 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
CDH1-210ENST00000566612 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
CDH1-210ENST00000566612 Q6ZQT0 140 aa7.71□□□□□ -1.17
CDH1-210ENST00000566612 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
CDH1-210ENST00000566612 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
CDH1-210ENST00000566612 FAM168BA1KXE4 195 aa7.7□□□□□ -1.18
CDH1-210ENST00000566612 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
CDH1-210ENST00000566612 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
CDH1-210ENST00000566612 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
CDH1-210ENST00000566612 C15orf56Q8N910 161 aa7.7□□□□□ -1.18
CDH1-210ENST00000566612 PKIGQ9Y2B9 76 aa7.69□□□□□ -1.18
CDH1-210ENST00000566612 TMEM258P61165 79 aa7.69□□□□□ -1.18
CDH1-210ENST00000566612 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
CDH1-210ENST00000566612 NDUFB1O75438 58 aa7.68□□□□□ -1.18
CDH1-210ENST00000566612 FAM30AQ9NZY2 134 aa7.68□□□□□ -1.18
CDH1-210ENST00000566612 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
CDH1-210ENST00000566612 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
CDH1-210ENST00000566612 TENM4Q6N022 2769 aa7.67□□□□□ -1.18
CDH1-210ENST00000566612 F8WDY8 70 aa7.67□□□□□ -1.18
CDH1-210ENST00000566612 MP68P56378 58 aa7.67□□□□□ -1.18
CDH1-210ENST00000566612 ST20-AS1Q8NBB2 130 aa7.67□□□□□ -1.18
CDH1-210ENST00000566612 PRYO14603 147 aa7.67□□□□□ -1.18
CDH1-210ENST00000566612 DNAH10OSP0CZ25 163 aa7.66□□□□□ -1.18
CDH1-210ENST00000566612 Q8NDZ9 215 aa7.66□□□□□ -1.18
CDH1-210ENST00000566612 IGLV9-49A0A0B4J1Y8 123 aa7.66□□□□□ -1.18
CDH1-210ENST00000566612 PRR4Q16378 134 aa7.65□□□□□ -1.18
CDH1-210ENST00000566612 CASC10Q5T4H9 136 aa7.65□□□□□ -1.18
CDH1-210ENST00000566612 K7EIL1 84 aa7.65□□□□□ -1.19
CDH1-210ENST00000566612 A0A087WSZ3 146 aa7.64□□□□□ -1.19
CDH1-210ENST00000566612 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
CDH1-210ENST00000566612 LOC110117498A0A087WWA1 95 aa7.63□□□□□ -1.19
CDH1-210ENST00000566612 TRBV7-6A0A0J9YX20 115 aa7.63□□□□□ -1.19
CDH1-210ENST00000566612 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
CDH1-210ENST00000566612 Q6ZRX8 168 aa7.63□□□□□ -1.19
CDH1-210ENST00000566612 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
CDH1-210ENST00000566612 Q9BRP9 147 aa7.62□□□□□ -1.19
CDH1-210ENST00000566612 LRCOL1A6NCL2 159 aa7.62□□□□□ -1.19
CDH1-210ENST00000566612 LY6G6CO95867 125 aa7.62□□□□□ -1.19
CDH1-210ENST00000566612 CXCL6P80162 114 aa7.62□□□□□ -1.19
CDH1-210ENST00000566612 TENM1Q9UKZ4 2725 aa7.61□□□□□ -1.19
CDH1-210ENST00000566612 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
CDH1-210ENST00000566612 VWFP04275 2813 aa7.61□□□□□ -1.19
CDH1-210ENST00000566612 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
CDH1-210ENST00000566612 CRYGAP11844 174 aa7.6□□□□□ -1.19
CDH1-210ENST00000566612 NUPR2A6NF83 97 aa7.59□□□□□ -1.19
CDH1-210ENST00000566612 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
CDH1-210ENST00000566612 PHF5AQ7RTV0 110 aaKnown RBP7.59□□□□□ -1.19
CDH1-210ENST00000566612 MDFIQ99750 246 aa7.59□□□□□ -1.19
CDH1-210ENST00000566612 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
CDH1-210ENST00000566612 NBPF19A0A087WUL8 3843 aa7.58□□□□□ -1.2
CDH1-210ENST00000566612 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
CDH1-210ENST00000566612 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
CDH1-210ENST00000566612 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
CDH1-210ENST00000566612 TM2D3Q9BRN9 247 aa7.57□□□□□ -1.2
CDH1-210ENST00000566612 A0A0G2JQZ4 141 aa7.57□□□□□ -1.2
CDH1-210ENST00000566612 A0A1W2PNN7 141 aa7.57□□□□□ -1.2
CDH1-210ENST00000566612 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
CDH1-210ENST00000566612 IGLV1-50A0A075B6I6 118 aa7.56□□□□□ -1.2
CDH1-210ENST00000566612 NDUFC1O43677 76 aa7.56□□□□□ -1.2
CDH1-210ENST00000566612 Q8N377 158 aa7.55□□□□□ -1.2
CDH1-210ENST00000566612 WIPF1O43516 503 aa7.54□□□□□ -1.2
CDH1-210ENST00000566612 SMIM29Q86T20 159 aa7.54□□□□□ -1.2
CDH1-210ENST00000566612 LINC00476Q8WZB0 136 aa7.54□□□□□ -1.2
CDH1-210ENST00000566612 Q8NBF4 154 aa7.54□□□□□ -1.2
CDH1-210ENST00000566612 TRBV7-4A0A0J9YYF1 115 aa7.53□□□□□ -1.2
CDH1-210ENST00000566612 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
CDH1-210ENST00000566612 OTOGQ6ZRI0 2925 aa7.53□□□□□ -1.2
CDH1-210ENST00000566612 C16orf90A8MZG2 172 aa7.53□□□□□ -1.2
CDH1-210ENST00000566612 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
CDH1-210ENST00000566612 ERC2-IT1O76042 136 aa7.52□□□□□ -1.21
CDH1-210ENST00000566612 EPM2AB3EWF7 344 aa7.51□□□□□ -1.21
CDH1-210ENST00000566612 PDZD2O15018 2839 aa7.51□□□□□ -1.21
CDH1-210ENST00000566612 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
CDH1-210ENST00000566612 IGLV5-52A0A0A0MRZ9 124 aa7.5□□□□□ -1.21
CDH1-210ENST00000566612 FBN1P35555 2871 aaKnown RBP7.5□□□□□ -1.21
CDH1-210ENST00000566612 C5orf47Q569G3 176 aa7.5□□□□□ -1.21
CDH1-210ENST00000566612 BRK1Q8WUW1 75 aa7.49□□□□□ -1.21
CDH1-210ENST00000566612 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
CDH1-210ENST00000566612 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
CDH1-210ENST00000566612 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
CDH1-210ENST00000566612 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
CDH1-210ENST00000566612 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
CDH1-210ENST00000566612 TLX1NBP0CAT3 122 aa7.47□□□□□ -1.21
CDH1-210ENST00000566612 CIRBP-AS1Q8TBR5 109 aa7.47□□□□□ -1.21
CDH1-210ENST00000566612 ZNF706Q9Y5V0 76 aaPredicted RBP7.47□□□□□ -1.21
CDH1-210ENST00000566612 C4orf48Q5BLP8 95 aa7.46□□□□□ -1.21
CDH1-210ENST00000566612 IGHV6-1A0A0B4J1U7 121 aa7.46□□□□□ -1.22
CDH1-210ENST00000566612 C1orf134Q5TEV5 83 aa7.46□□□□□ -1.22
CDH1-210ENST00000566612 SMIM26A0A096LP01 95 aa7.45□□□□□ -1.22
CDH1-210ENST00000566612 K7EQZ3 153 aa7.45□□□□□ -1.22
CDH1-210ENST00000566612 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
CDH1-210ENST00000566612 A0A1W2PNM2 257 aa7.44□□□□□ -1.22
CDH1-210ENST00000566612 KRTAP26-1Q6PEX3 210 aa7.44□□□□□ -1.22
CDH1-210ENST00000566612 BCE1O60756 84 aa7.44□□□□□ -1.22
CDH1-210ENST00000566612 IGFL1Q6UW32 110 aa7.43□□□□□ -1.22
CDH1-210ENST00000566612 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 2744.1 ms