RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.49□□□□□ -0.73
TPM1-219ENST00000559397 IGKV2-24A0A0C4DH68 120 aa10.48□□□□□ -0.73
TPM1-219ENST00000559397 SLC25A20O43772 301 aa10.48□□□□□ -0.73
TPM1-219ENST00000559397 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
TPM1-219ENST00000559397 BIRC6Q9NR09 4857 aa10.48□□□□□ -0.73
TPM1-219ENST00000559397 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
TPM1-219ENST00000559397 FAM168BA1KXE4 195 aa10.47□□□□□ -0.73
TPM1-219ENST00000559397 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
TPM1-219ENST00000559397 HSPG2P98160 4391 aa10.47□□□□□ -0.73
TPM1-219ENST00000559397 RYR1P21817 5038 aa10.47□□□□□ -0.73
TPM1-219ENST00000559397 NKAPP1Q8N9T2 125 aa10.47□□□□□ -0.73
TPM1-219ENST00000559397 A0A087WYN8 130 aa10.46□□□□□ -0.74
TPM1-219ENST00000559397 C7orf33Q8WU49 177 aa10.46□□□□□ -0.74
TPM1-219ENST00000559397 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.74
TPM1-219ENST00000559397 LINC00474Q9P2X8 69 aa10.45□□□□□ -0.74
TPM1-219ENST00000559397 H3BT86 120 aa10.44□□□□□ -0.74
TPM1-219ENST00000559397 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
TPM1-219ENST00000559397 A0A1B0GX51 115 aa10.44□□□□□ -0.74
TPM1-219ENST00000559397 ETDBQ3ZM63 59 aa10.44□□□□□ -0.74
TPM1-219ENST00000559397 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
TPM1-219ENST00000559397 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
TPM1-219ENST00000559397 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
TPM1-219ENST00000559397 DIRC1Q969H9 104 aa10.43□□□□□ -0.74
TPM1-219ENST00000559397 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
TPM1-219ENST00000559397 A0A1W2PNN7 141 aa10.41□□□□□ -0.74
TPM1-219ENST00000559397 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
TPM1-219ENST00000559397 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
TPM1-219ENST00000559397 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
TPM1-219ENST00000559397 MRPL55Q7Z7F7 128 aaKnown RBP10.41□□□□□ -0.74
TPM1-219ENST00000559397 TEN1Q86WV5 123 aa10.41□□□□□ -0.74
TPM1-219ENST00000559397 IGLV1-50A0A075B6I6 118 aa10.4□□□□□ -0.74
TPM1-219ENST00000559397 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
TPM1-219ENST00000559397 XGP55808 180 aa10.4□□□□□ -0.74
TPM1-219ENST00000559397 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
TPM1-219ENST00000559397 CIRBP-AS1Q8TBR5 109 aa10.4□□□□□ -0.74
TPM1-219ENST00000559397 KIAA1109Q2LD37 5005 aa10.4□□□□□ -0.75
TPM1-219ENST00000559397 FAT1Q14517 4588 aa10.39□□□□□ -0.75
TPM1-219ENST00000559397 HAMPP81172 84 aa10.39□□□□□ -0.75
TPM1-219ENST00000559397 OCIAD2Q56VL3 154 aa10.39□□□□□ -0.75
TPM1-219ENST00000559397 DPH3Q96FX2 82 aa10.39□□□□□ -0.75
TPM1-219ENST00000559397 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
TPM1-219ENST00000559397 DNAL4O96015 105 aa10.38□□□□□ -0.75
TPM1-219ENST00000559397 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
TPM1-219ENST00000559397 BAALC-AS2P0C853 105 aa10.38□□□□□ -0.75
TPM1-219ENST00000559397 COX7BP24311 80 aa10.38□□□□□ -0.75
TPM1-219ENST00000559397 PRYO14603 147 aa10.37□□□□□ -0.75
TPM1-219ENST00000559397 VPS13BQ7Z7G8 4022 aa10.37□□□□□ -0.75
TPM1-219ENST00000559397 SPRR1AP35321 89 aa10.36□□□□□ -0.75
TPM1-219ENST00000559397 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
TPM1-219ENST00000559397 hADV29S1A0JD25 119 aa10.34□□□□□ -0.75
TPM1-219ENST00000559397 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
TPM1-219ENST00000559397 CDK2AP2O75956 126 aa10.34□□□□□ -0.75
TPM1-219ENST00000559397 SNCGO76070 127 aa10.34□□□□□ -0.75
TPM1-219ENST00000559397 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
TPM1-219ENST00000559397 PPDPFLQ8WWR9 84 aa10.34□□□□□ -0.75
TPM1-219ENST00000559397 K7ERU9 68 aa10.32□□□□□ -0.76
TPM1-219ENST00000559397 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
TPM1-219ENST00000559397 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
TPM1-219ENST00000559397 B5MCH6 92 aa10.29□□□□□ -0.76
TPM1-219ENST00000559397 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
TPM1-219ENST00000559397 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
TPM1-219ENST00000559397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
TPM1-219ENST00000559397 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
TPM1-219ENST00000559397 Q6ZRX8 168 aa10.28□□□□□ -0.76
TPM1-219ENST00000559397 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
TPM1-219ENST00000559397 J3QR89 54 aa10.27□□□□□ -0.77
TPM1-219ENST00000559397 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
TPM1-219ENST00000559397 Q6ZQY7 126 aa10.26□□□□□ -0.77
TPM1-219ENST00000559397 HERC2O95714 4834 aa10.25□□□□□ -0.77
TPM1-219ENST00000559397 H3BQ85 93 aa10.25□□□□□ -0.77
TPM1-219ENST00000559397 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
TPM1-219ENST00000559397 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
TPM1-219ENST00000559397 OBSCN-AS1Q96MR7 158 aa10.25□□□□□ -0.77
TPM1-219ENST00000559397 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
TPM1-219ENST00000559397 Q9BRP9 147 aa10.24□□□□□ -0.77
TPM1-219ENST00000559397 UBE2BP63146 152 aa10.22□□□□□ -0.77
TPM1-219ENST00000559397 PKHD1L1Q86WI1 4243 aa10.22□□□□□ -0.77
TPM1-219ENST00000559397 GHRHP01286 108 aa10.21□□□□□ -0.78
TPM1-219ENST00000559397 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.78
TPM1-219ENST00000559397 H0Y9J4 135 aa10.18□□□□□ -0.78
TPM1-219ENST00000559397 PSORS1C2Q9UIG4 136 aa10.18□□□□□ -0.78
TPM1-219ENST00000559397 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
TPM1-219ENST00000559397 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
TPM1-219ENST00000559397 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
TPM1-219ENST00000559397 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
TPM1-219ENST00000559397 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
TPM1-219ENST00000559397 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.79
TPM1-219ENST00000559397 Q8N1X5 172 aa10.15□□□□□ -0.79
TPM1-219ENST00000559397 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
TPM1-219ENST00000559397 BCE1O60756 84 aa10.14□□□□□ -0.79
TPM1-219ENST00000559397 KRTAP10-4P60372 401 aaPredicted RBP10.14□□□□□ -0.79
TPM1-219ENST00000559397 PRLHP81277 87 aa10.14□□□□□ -0.79
TPM1-219ENST00000559397 Q8N377 158 aa10.14□□□□□ -0.79
TPM1-219ENST00000559397 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
TPM1-219ENST00000559397 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
TPM1-219ENST00000559397 FAM240AA0A1B0GVK7 77 aa10.12□□□□□ -0.79
TPM1-219ENST00000559397 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
TPM1-219ENST00000559397 Q5VSD8 79 aa10.12□□□□□ -0.79
TPM1-219ENST00000559397 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
TPM1-219ENST00000559397 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms