RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
TPM1-212ENST00000558347 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
TPM1-212ENST00000558347 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
TPM1-212ENST00000558347 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
TPM1-212ENST00000558347 GAGE2AQ6NT46 116 aa6.72□□□□□ -1.33
TPM1-212ENST00000558347 RMI2Q96E14 147 aa6.72□□□□□ -1.33
TPM1-212ENST00000558347 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
TPM1-212ENST00000558347 HAMPP81172 84 aa6.71□□□□□ -1.33
TPM1-212ENST00000558347 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
TPM1-212ENST00000558347 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
TPM1-212ENST00000558347 IGKV2D-24A0A075B6R9 120 aa6.7□□□□□ -1.34
TPM1-212ENST00000558347 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
TPM1-212ENST00000558347 H3BQ85 93 aa6.7□□□□□ -1.34
TPM1-212ENST00000558347 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
TPM1-212ENST00000558347 SPAG11BQ08648 103 aa6.7□□□□□ -1.34
TPM1-212ENST00000558347 Q6JHZ5 121 aa6.7□□□□□ -1.34
TPM1-212ENST00000558347 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.69□□□□□ -1.34
TPM1-212ENST00000558347 FAM236AA0A1B0GUQ0 79 aa6.69□□□□□ -1.34
TPM1-212ENST00000558347 FAM236BA0A1B0GV22 79 aa6.69□□□□□ -1.34
TPM1-212ENST00000558347 CCDC179H3BU77 68 aa6.69□□□□□ -1.34
TPM1-212ENST00000558347 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
TPM1-212ENST00000558347 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
TPM1-212ENST00000558347 MYCBP2O75592 4640 aa6.68□□□□□ -1.34
TPM1-212ENST00000558347 HERC1Q15751 4861 aa6.68□□□□□ -1.34
TPM1-212ENST00000558347 Q5VSD8 79 aa6.68□□□□□ -1.34
TPM1-212ENST00000558347 C14orf132Q9NPU4 83 aa6.68□□□□□ -1.34
TPM1-212ENST00000558347 SRRM2Q9UQ35 2752 aaKnown RBP6.68□□□□□ -1.34
TPM1-212ENST00000558347 B5MCH6 92 aa6.67□□□□□ -1.34
TPM1-212ENST00000558347 CCKP06307 115 aa6.67□□□□□ -1.34
TPM1-212ENST00000558347 S100A7L2Q5SY68 101 aa6.67□□□□□ -1.34
TPM1-212ENST00000558347 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
TPM1-212ENST00000558347 C9orf129Q5T035 196 aaKnown RBP6.66□□□□□ -1.34
TPM1-212ENST00000558347 NCR3O14931 201 aa6.66□□□□□ -1.34
TPM1-212ENST00000558347 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
TPM1-212ENST00000558347 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
TPM1-212ENST00000558347 LINC00575Q6W349 94 aa6.66□□□□□ -1.34
TPM1-212ENST00000558347 SLPIP03973 132 aa6.65□□□□□ -1.35
TPM1-212ENST00000558347 PRR3P79522 188 aaKnown RBP6.65□□□□□ -1.35
TPM1-212ENST00000558347 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.35
TPM1-212ENST00000558347 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.35
TPM1-212ENST00000558347 Q6ZSA8 131 aa6.65□□□□□ -1.35
TPM1-212ENST00000558347 C15orf56Q8N910 161 aa6.65□□□□□ -1.35
TPM1-212ENST00000558347 LINC00846Q9NV44 126 aa6.65□□□□□ -1.35
TPM1-212ENST00000558347 F8WDY8 70 aa6.64□□□□□ -1.35
TPM1-212ENST00000558347 ATOX1O00244 68 aa6.64□□□□□ -1.35
TPM1-212ENST00000558347 C6orf99Q4VX62 202 aa6.64□□□□□ -1.35
TPM1-212ENST00000558347 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
TPM1-212ENST00000558347 UQCRQO14949 82 aa6.63□□□□□ -1.35
TPM1-212ENST00000558347 C10orf25Q5T742 122 aa6.63□□□□□ -1.35
TPM1-212ENST00000558347 C3orf22Q8N5N4 141 aa6.63□□□□□ -1.35
TPM1-212ENST00000558347 Q8NDZ9 215 aa6.63□□□□□ -1.35
TPM1-212ENST00000558347 C2orf48Q96LS8 159 aa6.63□□□□□ -1.35
TPM1-212ENST00000558347 TRBV7-6A0A0J9YX20 115 aa6.62□□□□□ -1.35
TPM1-212ENST00000558347 hADV29S1A0JD25 119 aa6.62□□□□□ -1.35
TPM1-212ENST00000558347 SS18L2Q9UHA2 77 aa6.62□□□□□ -1.35
TPM1-212ENST00000558347 LOC110117498A0A087WWA1 95 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 USP17L23D6RBM5 183 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 GHRHP01286 108 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 C6orf48Q9UBA6 75 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
TPM1-212ENST00000558347 PDE6GP18545 87 aa6.6□□□□□ -1.35
TPM1-212ENST00000558347 RPL18AQ02543 176 aaKnown RBP6.6□□□□□ -1.35
TPM1-212ENST00000558347 HIGD2BQ4VC39 106 aa6.6□□□□□ -1.35
TPM1-212ENST00000558347 TRBV10-3A0A0K0K1G6 114 aa6.6□□□□□ -1.35
TPM1-212ENST00000558347 COX7CP15954 63 aa6.6□□□□□ -1.35
TPM1-212ENST00000558347 C14orf177Q52M58 125 aa6.6□□□□□ -1.35
TPM1-212ENST00000558347 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
TPM1-212ENST00000558347 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
TPM1-212ENST00000558347 DIRC1Q969H9 104 aa6.59□□□□□ -1.35
TPM1-212ENST00000558347 CAMK2N2Q96S95 79 aa6.59□□□□□ -1.35
TPM1-212ENST00000558347 IGKV3D-7A0A0C4DH55 119 aa6.58□□□□□ -1.36
TPM1-212ENST00000558347 RBM3P98179 157 aaKnown RBP6.58□□□□□ -1.36
TPM1-212ENST00000558347 SYCNQ0VAF6 134 aa6.58□□□□□ -1.36
TPM1-212ENST00000558347 C9orf153Q5TBE3 101 aa6.58□□□□□ -1.36
TPM1-212ENST00000558347 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
TPM1-212ENST00000558347 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
TPM1-212ENST00000558347 Q6ZQT0 140 aa6.57□□□□□ -1.36
TPM1-212ENST00000558347 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
TPM1-212ENST00000558347 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
TPM1-212ENST00000558347 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
TPM1-212ENST00000558347 M0R378 163 aa6.56□□□□□ -1.36
TPM1-212ENST00000558347 CRYGAP11844 174 aa6.56□□□□□ -1.36
TPM1-212ENST00000558347 VPREB1P12018 145 aa6.56□□□□□ -1.36
TPM1-212ENST00000558347 COX7BP24311 80 aa6.56□□□□□ -1.36
TPM1-212ENST00000558347 Q6ZRU5 148 aa6.56□□□□□ -1.36
TPM1-212ENST00000558347 CIRBP-AS1Q8TBR5 109 aa6.56□□□□□ -1.36
TPM1-212ENST00000558347 ELOF1P60002 83 aaKnown RBP6.55□□□□□ -1.36
TPM1-212ENST00000558347 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
TPM1-212ENST00000558347 C9orf163Q8N9P6 203 aa6.55□□□□□ -1.36
TPM1-212ENST00000558347 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
TPM1-212ENST00000558347 NDUFC2-KCTD14E9PQ53 114 aa6.55□□□□□ -1.36
TPM1-212ENST00000558347 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
TPM1-212ENST00000558347 BCE1O60756 84 aa6.55□□□□□ -1.36
TPM1-212ENST00000558347 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
TPM1-212ENST00000558347 LAMTOR3Q9UHA4 124 aa6.55□□□□□ -1.36
TPM1-212ENST00000558347 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
TPM1-212ENST00000558347 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
TPM1-212ENST00000558347 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms