RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 A0A0U1RQV1 116 aa9.95□□□□□ -0.82
NEK9-211ENST00000557673 ZNF861PO60384 105 aa9.95□□□□□ -0.82
NEK9-211ENST00000557673 RPL13AP40429 203 aaKnown RBP9.95□□□□□ -0.82
NEK9-211ENST00000557673 SPRR1AP35321 89 aa9.94□□□□□ -0.82
NEK9-211ENST00000557673 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
NEK9-211ENST00000557673 S100A7L2Q5SY68 101 aa9.94□□□□□ -0.82
NEK9-211ENST00000557673 SLC25A34Q6PIV7 304 aa9.94□□□□□ -0.82
NEK9-211ENST00000557673 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
NEK9-211ENST00000557673 KRTAP1-4P0C5Y4 121 aa9.93□□□□□ -0.82
NEK9-211ENST00000557673 UBE2AP49459 152 aa9.93□□□□□ -0.82
NEK9-211ENST00000557673 PRLHP81277 87 aa9.93□□□□□ -0.82
NEK9-211ENST00000557673 PRR4Q16378 134 aa9.93□□□□□ -0.82
NEK9-211ENST00000557673 MUC2Q02817 5179 aa9.93□□□□□ -0.82
NEK9-211ENST00000557673 S100A12P80511 92 aa9.92□□□□□ -0.82
NEK9-211ENST00000557673 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
NEK9-211ENST00000557673 FAM19A1Q7Z5A9 133 aa9.92□□□□□ -0.82
NEK9-211ENST00000557673 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
NEK9-211ENST00000557673 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
NEK9-211ENST00000557673 LINC00518Q8N0U6 118 aa9.91□□□□□ -0.82
NEK9-211ENST00000557673 KRTAP9-2Q9BYQ4 174 aa9.91□□□□□ -0.82
NEK9-211ENST00000557673 HIGD1BQ9P298 99 aa9.91□□□□□ -0.82
NEK9-211ENST00000557673 TRAV23DV6A0A075B6W5 121 aa9.9□□□□□ -0.82
NEK9-211ENST00000557673 HIST1H4GQ99525 98 aa9.89□□□□□ -0.83
NEK9-211ENST00000557673 ETDCA0A1B0GVM5 59 aa9.88□□□□□ -0.83
NEK9-211ENST00000557673 OR13C6PQ8NH95 151 aa9.88□□□□□ -0.83
NEK9-211ENST00000557673 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
NEK9-211ENST00000557673 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
NEK9-211ENST00000557673 A4D1N5 150 aa9.86□□□□□ -0.83
NEK9-211ENST00000557673 ZNF73O43830 326 aaPredicted RBP9.86□□□□□ -0.83
NEK9-211ENST00000557673 B5MCH6 92 aa9.85□□□□□ -0.83
NEK9-211ENST00000557673 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
NEK9-211ENST00000557673 Q6ZRX8 168 aa9.84□□□□□ -0.83
NEK9-211ENST00000557673 HIGD2AQ9BW72 106 aa9.84□□□□□ -0.83
NEK9-211ENST00000557673 TRAV13-2A0A0B4J235 113 aa9.83□□□□□ -0.84
NEK9-211ENST00000557673 A6NDN8 102 aa9.82□□□□□ -0.84
NEK9-211ENST00000557673 TAL2Q16559 108 aa9.82□□□□□ -0.84
NEK9-211ENST00000557673 SMCR5Q8TEV8 140 aa9.81□□□□□ -0.84
NEK9-211ENST00000557673 UQCR10Q9UDW1 63 aa9.81□□□□□ -0.84
NEK9-211ENST00000557673 C12orf57Q99622 126 aa9.8□□□□□ -0.84
NEK9-211ENST00000557673 Q9BRP9 147 aa9.8□□□□□ -0.84
NEK9-211ENST00000557673 C6orf99Q4VX62 202 aa9.79□□□□□ -0.84
NEK9-211ENST00000557673 CEND1Q8N111 149 aa9.79□□□□□ -0.84
NEK9-211ENST00000557673 A0A087X002 238 aa9.77□□□□□ -0.85
NEK9-211ENST00000557673 TSPAN13O95857 204 aa9.77□□□□□ -0.85
NEK9-211ENST00000557673 HINT1P49773 126 aaPredicted RBP9.77□□□□□ -0.85
NEK9-211ENST00000557673 ELOF1P60002 83 aaKnown RBP9.77□□□□□ -0.85
NEK9-211ENST00000557673 HSD52Q0P140 79 aa9.77□□□□□ -0.85
NEK9-211ENST00000557673 FAT4Q6V0I7 4981 aa9.77□□□□□ -0.85
NEK9-211ENST00000557673 FXYD2P54710 66 aa9.76□□□□□ -0.85
NEK9-211ENST00000557673 SMIM11BQ8TCY0 68 aa9.76□□□□□ -0.85
NEK9-211ENST00000557673 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
NEK9-211ENST00000557673 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
NEK9-211ENST00000557673 A0A0B4J2C4 111 aa9.75□□□□□ -0.85
NEK9-211ENST00000557673 TRBV7-6A0A0J9YX20 115 aa9.75□□□□□ -0.85
NEK9-211ENST00000557673 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
NEK9-211ENST00000557673 COX7BP24311 80 aa9.75□□□□□ -0.85
NEK9-211ENST00000557673 SPRR4Q96PI1 79 aa9.75□□□□□ -0.85
NEK9-211ENST00000557673 PRO1933Q9H354 126 aa9.75□□□□□ -0.85
NEK9-211ENST00000557673 KRTAP9-6A0A140TA67 174 aa9.74□□□□□ -0.85
NEK9-211ENST00000557673 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
NEK9-211ENST00000557673 A6NJY4 79 aa9.74□□□□□ -0.85
NEK9-211ENST00000557673 CFC1BP0CG36 223 aa9.74□□□□□ -0.85
NEK9-211ENST00000557673 CFC1P0CG37 223 aa9.74□□□□□ -0.85
NEK9-211ENST00000557673 CRYGAP11844 174 aa9.74□□□□□ -0.85
NEK9-211ENST00000557673 A0A1B0GWB2 263 aa9.73□□□□□ -0.85
NEK9-211ENST00000557673 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
NEK9-211ENST00000557673 TYMSOSQ8TAI1 123 aa9.72□□□□□ -0.85
NEK9-211ENST00000557673 RAB37Q96AX2 223 aa9.71□□□□□ -0.86
NEK9-211ENST00000557673 DHRS4-AS1Q9P1J3 65 aa9.71□□□□□ -0.86
NEK9-211ENST00000557673 KRTAP13-2Q52LG2 175 aa9.7□□□□□ -0.86
NEK9-211ENST00000557673 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
NEK9-211ENST00000557673 H7C2G1 150 aa9.67□□□□□ -0.86
NEK9-211ENST00000557673 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
NEK9-211ENST00000557673 NHP2Q9NX24 153 aaKnown RBP9.67□□□□□ -0.86
NEK9-211ENST00000557673 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
NEK9-211ENST00000557673 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
NEK9-211ENST00000557673 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
NEK9-211ENST00000557673 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.86
NEK9-211ENST00000557673 K7ERJ3 54 aa9.64□□□□□ -0.87
NEK9-211ENST00000557673 VAMP3Q15836 100 aa9.64□□□□□ -0.87
NEK9-211ENST00000557673 C3orf22Q8N5N4 141 aa9.64□□□□□ -0.87
NEK9-211ENST00000557673 Q1RN00 199 aa9.63□□□□□ -0.87
NEK9-211ENST00000557673 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
NEK9-211ENST00000557673 CDIP1Q9H305 208 aa9.62□□□□□ -0.87
NEK9-211ENST00000557673 SPRR1BP22528 89 aa9.61□□□□□ -0.87
NEK9-211ENST00000557673 CTAG1AP78358 180 aa9.61□□□□□ -0.87
NEK9-211ENST00000557673 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
NEK9-211ENST00000557673 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
NEK9-211ENST00000557673 LINC00304Q8N9R0 145 aa9.6□□□□□ -0.87
NEK9-211ENST00000557673 M0R143 59 aa9.59□□□□□ -0.87
NEK9-211ENST00000557673 SLC25A20O43772 301 aa9.59□□□□□ -0.87
NEK9-211ENST00000557673 IGLV5-48A0A075B6I7 105 aa9.58□□□□□ -0.88
NEK9-211ENST00000557673 LINC01547P58512 204 aaPredicted RBP9.58□□□□□ -0.88
NEK9-211ENST00000557673 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
NEK9-211ENST00000557673 TRIAP1O43715 76 aa9.57□□□□□ -0.88
NEK9-211ENST00000557673 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
NEK9-211ENST00000557673 IGLV9-49A0A0B4J1Y8 123 aa9.56□□□□□ -0.88
NEK9-211ENST00000557673 hADV29S1A0JD25 119 aa9.56□□□□□ -0.88
NEK9-211ENST00000557673 MOBPQ13875 183 aa9.56□□□□□ -0.88
NEK9-211ENST00000557673 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms