RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 A8MU10 97 aa10.4□□□□□ -0.74
SYNE3-203ENST00000554873 Q5VV11 94 aa10.4□□□□□ -0.74
SYNE3-203ENST00000554873 ANGP03950 147 aaKnown RBP10.4□□□□□ -0.74
SYNE3-203ENST00000554873 KRTAP10-3P60369 221 aa10.39□□□□□ -0.75
SYNE3-203ENST00000554873 REG3AQ06141 175 aa10.39□□□□□ -0.75
SYNE3-203ENST00000554873 DEFB4AO15263 64 aa10.39□□□□□ -0.75
SYNE3-203ENST00000554873 PDZD2O15018 2839 aa10.38□□□□□ -0.75
SYNE3-203ENST00000554873 C3orf84H3BNL1 204 aa10.38□□□□□ -0.75
SYNE3-203ENST00000554873 UBE2AP49459 152 aa10.38□□□□□ -0.75
SYNE3-203ENST00000554873 UNQ6190/PRO20217Q6UXQ8 127 aa10.38□□□□□ -0.75
SYNE3-203ENST00000554873 ETDCA0A1B0GVM5 59 aa10.37□□□□□ -0.75
SYNE3-203ENST00000554873 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
SYNE3-203ENST00000554873 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
SYNE3-203ENST00000554873 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
SYNE3-203ENST00000554873 PRR4Q16378 134 aa10.35□□□□□ -0.75
SYNE3-203ENST00000554873 VWFP04275 2813 aa10.35□□□□□ -0.75
SYNE3-203ENST00000554873 M0R378 163 aa10.34□□□□□ -0.75
SYNE3-203ENST00000554873 SPAG11BQ08648 103 aa10.34□□□□□ -0.75
SYNE3-203ENST00000554873 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
SYNE3-203ENST00000554873 HIVEP2P31629 2446 aa10.33□□□□□ -0.76
SYNE3-203ENST00000554873 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
SYNE3-203ENST00000554873 CHKB-CPT1BH3BT56 60 aa10.33□□□□□ -0.76
SYNE3-203ENST00000554873 NDUFB1O75438 58 aa10.33□□□□□ -0.76
SYNE3-203ENST00000554873 NDUFS5O43920 106 aa10.32□□□□□ -0.76
SYNE3-203ENST00000554873 TENM4Q6N022 2769 aa10.32□□□□□ -0.76
SYNE3-203ENST00000554873 CYSRT1A8MQ03 144 aa10.32□□□□□ -0.76
SYNE3-203ENST00000554873 LINC00528Q8N1L1 170 aa10.3□□□□□ -0.76
SYNE3-203ENST00000554873 LIMD2Q9BT23 127 aa10.3□□□□□ -0.76
SYNE3-203ENST00000554873 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
SYNE3-203ENST00000554873 A0A1B0GW54 56 aa10.29□□□□□ -0.76
SYNE3-203ENST00000554873 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
SYNE3-203ENST00000554873 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
SYNE3-203ENST00000554873 ST20-AS1Q8NBB2 130 aa10.28□□□□□ -0.76
SYNE3-203ENST00000554873 GVQW2A0A096LPI5 108 aaPredicted RBP10.28□□□□□ -0.76
SYNE3-203ENST00000554873 HCG22E2RYF7 251 aa10.27□□□□□ -0.77
SYNE3-203ENST00000554873 PRB2P02812 416 aaPredicted RBP10.27□□□□□ -0.77
SYNE3-203ENST00000554873 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
SYNE3-203ENST00000554873 SMR3AQ99954 134 aa10.27□□□□□ -0.77
SYNE3-203ENST00000554873 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
SYNE3-203ENST00000554873 B9D2Q9BPU9 175 aa10.27□□□□□ -0.77
SYNE3-203ENST00000554873 KMT2BQ9UMN6 2715 aaPredicted RBP10.26□□□□□ -0.77
SYNE3-203ENST00000554873 HTN3P15516 51 aa10.25□□□□□ -0.77
SYNE3-203ENST00000554873 KPRPQ5T749 579 aaPredicted RBP10.25□□□□□ -0.77
SYNE3-203ENST00000554873 IGLV5-48A0A075B6I7 105 aa10.25□□□□□ -0.77
SYNE3-203ENST00000554873 LELP1Q5T871 98 aa10.25□□□□□ -0.77
SYNE3-203ENST00000554873 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
SYNE3-203ENST00000554873 A6NN06 94 aa10.24□□□□□ -0.77
SYNE3-203ENST00000554873 Q8NAQ8 132 aa10.24□□□□□ -0.77
SYNE3-203ENST00000554873 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
SYNE3-203ENST00000554873 PRR15LQ9BU68 103 aa10.24□□□□□ -0.77
SYNE3-203ENST00000554873 VPREB1P12018 145 aa10.23□□□□□ -0.77
SYNE3-203ENST00000554873 APOC4P55056 127 aa10.23□□□□□ -0.77
SYNE3-203ENST00000554873 C6orf48Q9UBA6 75 aa10.23□□□□□ -0.77
SYNE3-203ENST00000554873 DSCR10P59022 87 aa10.22□□□□□ -0.77
SYNE3-203ENST00000554873 LCA10Q71F78 164 aa10.22□□□□□ -0.77
SYNE3-203ENST00000554873 LINC00208Q96KT6 92 aa10.21□□□□□ -0.78
SYNE3-203ENST00000554873 A0A1W2PNM2 257 aa10.2□□□□□ -0.78
SYNE3-203ENST00000554873 K7EQZ3 153 aa10.2□□□□□ -0.78
SYNE3-203ENST00000554873 SPART-AS1P0CW21 52 aa10.2□□□□□ -0.78
SYNE3-203ENST00000554873 Q75L30 129 aa10.2□□□□□ -0.78
SYNE3-203ENST00000554873 MP68P56378 58 aa10.19□□□□□ -0.78
SYNE3-203ENST00000554873 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
SYNE3-203ENST00000554873 Q8N377 158 aa10.19□□□□□ -0.78
SYNE3-203ENST00000554873 Q9BRP9 147 aa10.19□□□□□ -0.78
SYNE3-203ENST00000554873 FASNP49327 2511 aaKnown RBP10.19□□□□□ -0.78
SYNE3-203ENST00000554873 SPANXA2-OT1Q8N9U9 137 aa10.19□□□□□ -0.78
SYNE3-203ENST00000554873 UNC79Q9P2D8 2635 aa10.18□□□□□ -0.78
SYNE3-203ENST00000554873 DEFB105AQ8NG35 78 aa10.18□□□□□ -0.78
SYNE3-203ENST00000554873 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
SYNE3-203ENST00000554873 TENM1Q9UKZ4 2725 aa10.17□□□□□ -0.78
SYNE3-203ENST00000554873 A6NED7 52 aa10.17□□□□□ -0.78
SYNE3-203ENST00000554873 C7orf65Q6ZTY9 151 aa10.16□□□□□ -0.78
SYNE3-203ENST00000554873 NOTCH2Q04721 2471 aa10.16□□□□□ -0.78
SYNE3-203ENST00000554873 Q8NBF4 154 aa10.15□□□□□ -0.78
SYNE3-203ENST00000554873 C11orf45Q8TAV5 145 aa10.15□□□□□ -0.78
SYNE3-203ENST00000554873 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.79
SYNE3-203ENST00000554873 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
SYNE3-203ENST00000554873 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
SYNE3-203ENST00000554873 HIVEP1P15822 2718 aa10.14□□□□□ -0.79
SYNE3-203ENST00000554873 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
SYNE3-203ENST00000554873 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
SYNE3-203ENST00000554873 CAMK2N2Q96S95 79 aa10.11□□□□□ -0.79
SYNE3-203ENST00000554873 HECTD1Q9ULT8 2610 aa10.11□□□□□ -0.79
SYNE3-203ENST00000554873 TNP2Q05952 138 aa10.11□□□□□ -0.79
SYNE3-203ENST00000554873 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
SYNE3-203ENST00000554873 ATRQ13535 2644 aa10.09□□□□□ -0.79
SYNE3-203ENST00000554873 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
SYNE3-203ENST00000554873 EGFEM1PQ0D2K5 195 aa10.09□□□□□ -0.79
SYNE3-203ENST00000554873 H3BPC8 53 aa10.08□□□□□ -0.8
SYNE3-203ENST00000554873 C8orf87E5RJ46 101 aa10.06□□□□□ -0.8
SYNE3-203ENST00000554873 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
SYNE3-203ENST00000554873 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
SYNE3-203ENST00000554873 INAFM1C9JVW0 142 aa10.05□□□□□ -0.8
SYNE3-203ENST00000554873 MOBPQ13875 183 aa10.05□□□□□ -0.8
SYNE3-203ENST00000554873 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
SYNE3-203ENST00000554873 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
SYNE3-203ENST00000554873 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
SYNE3-203ENST00000554873 DEFB116Q30KQ4 102 aa10.04□□□□□ -0.8
SYNE3-203ENST00000554873 PKD1L1Q8TDX9 2849 aa10.04□□□□□ -0.8
SYNE3-203ENST00000554873 H0Y9P7 68 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms