RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 COPS9Q8WXC6 57 aa10.04□□□□□ -0.8
NEK9-204ENST00000554258 LINC00167Q96N53 147 aa10.04□□□□□ -0.8
NEK9-204ENST00000554258 MIEN1Q9BRT3 115 aa10.04□□□□□ -0.8
NEK9-204ENST00000554258 TRBV10-2A0A0K0K1G8 114 aa10.03□□□□□ -0.8
NEK9-204ENST00000554258 M0R378 163 aa10.03□□□□□ -0.8
NEK9-204ENST00000554258 NPC2P61916 151 aa10.03□□□□□ -0.8
NEK9-204ENST00000554258 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
NEK9-204ENST00000554258 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
NEK9-204ENST00000554258 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
NEK9-204ENST00000554258 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.81
NEK9-204ENST00000554258 UQCR10Q9UDW1 63 aa10.02□□□□□ -0.81
NEK9-204ENST00000554258 H0Y9J4 135 aa10.01□□□□□ -0.81
NEK9-204ENST00000554258 C12orf57Q99622 126 aa10.01□□□□□ -0.81
NEK9-204ENST00000554258 LINC00518Q8N0U6 118 aa10□□□□□ -0.81
NEK9-204ENST00000554258 IGKV2-28A0A075B6P5 120 aa9.99□□□□□ -0.81
NEK9-204ENST00000554258 IGKV2D-28P01615 120 aa9.99□□□□□ -0.81
NEK9-204ENST00000554258 TAL2Q16559 108 aa9.99□□□□□ -0.81
NEK9-204ENST00000554258 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
NEK9-204ENST00000554258 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
NEK9-204ENST00000554258 NCR3O14931 201 aa9.97□□□□□ -0.81
NEK9-204ENST00000554258 IGLV7-43P04211 117 aa9.97□□□□□ -0.81
NEK9-204ENST00000554258 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
NEK9-204ENST00000554258 UBE2BP63146 152 aa9.97□□□□□ -0.81
NEK9-204ENST00000554258 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
NEK9-204ENST00000554258 IGLV6-57P01721 117 aa9.96□□□□□ -0.82
NEK9-204ENST00000554258 PRO1933Q9H354 126 aa9.96□□□□□ -0.82
NEK9-204ENST00000554258 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
NEK9-204ENST00000554258 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
NEK9-204ENST00000554258 A4D1N5 150 aa9.94□□□□□ -0.82
NEK9-204ENST00000554258 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
NEK9-204ENST00000554258 CRYGAP11844 174 aa9.93□□□□□ -0.82
NEK9-204ENST00000554258 DDTP30046 118 aa9.92□□□□□ -0.82
NEK9-204ENST00000554258 HSD52Q0P140 79 aa9.92□□□□□ -0.82
NEK9-204ENST00000554258 CEND1Q8N111 149 aa9.92□□□□□ -0.82
NEK9-204ENST00000554258 PRYO14603 147 aa9.91□□□□□ -0.82
NEK9-204ENST00000554258 SPRR1AP35321 89 aa9.91□□□□□ -0.82
NEK9-204ENST00000554258 TMEM126AQ9H061 195 aa9.91□□□□□ -0.82
NEK9-204ENST00000554258 TPRXLQ17RH7 258 aa9.9□□□□□ -0.82
NEK9-204ENST00000554258 S100A7L2Q5SY68 101 aa9.9□□□□□ -0.82
NEK9-204ENST00000554258 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
NEK9-204ENST00000554258 BCE1O60756 84 aa9.89□□□□□ -0.83
NEK9-204ENST00000554258 TRAV13-2A0A0B4J235 113 aa9.88□□□□□ -0.83
NEK9-204ENST00000554258 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
NEK9-204ENST00000554258 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
NEK9-204ENST00000554258 CFC1BP0CG36 223 aa9.87□□□□□ -0.83
NEK9-204ENST00000554258 CFC1P0CG37 223 aa9.87□□□□□ -0.83
NEK9-204ENST00000554258 FXYD2P54710 66 aa9.87□□□□□ -0.83
NEK9-204ENST00000554258 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
NEK9-204ENST00000554258 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
NEK9-204ENST00000554258 RETNLBQ9BQ08 111 aa9.87□□□□□ -0.83
NEK9-204ENST00000554258 TRAV23DV6A0A075B6W5 121 aa9.85□□□□□ -0.83
NEK9-204ENST00000554258 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
NEK9-204ENST00000554258 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
NEK9-204ENST00000554258 A6NDN8 102 aa9.84□□□□□ -0.83
NEK9-204ENST00000554258 A6NJY4 79 aa9.84□□□□□ -0.83
NEK9-204ENST00000554258 ZNF861PO60384 105 aa9.84□□□□□ -0.83
NEK9-204ENST00000554258 A0A1B0GWB2 263 aa9.83□□□□□ -0.84
NEK9-204ENST00000554258 ZNF73O43830 326 aaPredicted RBP9.83□□□□□ -0.84
NEK9-204ENST00000554258 CTAG1AP78358 180 aa9.83□□□□□ -0.84
NEK9-204ENST00000554258 BVES-AS1Q5T3Y7 98 aa9.83□□□□□ -0.84
NEK9-204ENST00000554258 IGLV7-46A0A075B6I9 117 aa9.81□□□□□ -0.84
NEK9-204ENST00000554258 B5MCH6 92 aa9.81□□□□□ -0.84
NEK9-204ENST00000554258 TRBV7-6A0A0J9YX20 115 aa9.8□□□□□ -0.84
NEK9-204ENST00000554258 RPL28P46779 137 aaKnown RBP9.8□□□□□ -0.84
NEK9-204ENST00000554258 FAM19A1Q7Z5A9 133 aa9.8□□□□□ -0.84
NEK9-204ENST00000554258 SMIM11BQ8TCY0 68 aa9.8□□□□□ -0.84
NEK9-204ENST00000554258 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
NEK9-204ENST00000554258 UBE2AP49459 152 aa9.79□□□□□ -0.84
NEK9-204ENST00000554258 RAB37Q96AX2 223 aa9.79□□□□□ -0.84
NEK9-204ENST00000554258 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
NEK9-204ENST00000554258 PRLHP81277 87 aa9.77□□□□□ -0.85
NEK9-204ENST00000554258 C6orf99Q4VX62 202 aa9.77□□□□□ -0.85
NEK9-204ENST00000554258 Q6ZRX8 168 aa9.77□□□□□ -0.85
NEK9-204ENST00000554258 KRTAP4-1Q9BYQ7 146 aa9.77□□□□□ -0.85
NEK9-204ENST00000554258 NHP2Q9NX24 153 aaKnown RBP9.77□□□□□ -0.85
NEK9-204ENST00000554258 M0R143 59 aa9.76□□□□□ -0.85
NEK9-204ENST00000554258 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
NEK9-204ENST00000554258 ELOF1P60002 83 aaKnown RBP9.75□□□□□ -0.85
NEK9-204ENST00000554258 SMCR5Q8TEV8 140 aa9.74□□□□□ -0.85
NEK9-204ENST00000554258 Q9BRP9 147 aa9.74□□□□□ -0.85
NEK9-204ENST00000554258 COX7BP24311 80 aa9.73□□□□□ -0.85
NEK9-204ENST00000554258 ASB16-AS1Q495Z4 193 aa9.73□□□□□ -0.85
NEK9-204ENST00000554258 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
NEK9-204ENST00000554258 K7ERJ3 54 aa9.72□□□□□ -0.85
NEK9-204ENST00000554258 LCE2CQ5TA81 110 aa9.71□□□□□ -0.86
NEK9-204ENST00000554258 H7C2G1 150 aa9.7□□□□□ -0.86
NEK9-204ENST00000554258 VAMP3Q15836 100 aa9.7□□□□□ -0.86
NEK9-204ENST00000554258 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
NEK9-204ENST00000554258 A0A087X002 238 aa9.69□□□□□ -0.86
NEK9-204ENST00000554258 ERC2-IT1O76042 136 aa9.69□□□□□ -0.86
NEK9-204ENST00000554258 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
NEK9-204ENST00000554258 DHRS4-AS1Q9P1J3 65 aa9.69□□□□□ -0.86
NEK9-204ENST00000554258 MT1HP80294 61 aa9.68□□□□□ -0.86
NEK9-204ENST00000554258 H0YGX0 51 aa9.66□□□□□ -0.86
NEK9-204ENST00000554258 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
NEK9-204ENST00000554258 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.86
NEK9-204ENST00000554258 Q1RN00 199 aa9.65□□□□□ -0.86
NEK9-204ENST00000554258 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
NEK9-204ENST00000554258 SSPOA2VEC9 5147 aa9.65□□□□□ -0.86
NEK9-204ENST00000554258 TRIAP1O43715 76 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms