RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 HBDP02042 147 aa6.62□□□□□ -1.35
VPS29-211ENST00000553128 CD164Q04900 197 aa6.62□□□□□ -1.35
VPS29-211ENST00000553128 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
VPS29-211ENST00000553128 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
VPS29-211ENST00000553128 Q5XG85 94 aa6.61□□□□□ -1.35
VPS29-211ENST00000553128 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
VPS29-211ENST00000553128 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
VPS29-211ENST00000553128 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
VPS29-211ENST00000553128 FABP9Q0Z7S8 132 aa6.6□□□□□ -1.35
VPS29-211ENST00000553128 Q1RN00 199 aa6.6□□□□□ -1.35
VPS29-211ENST00000553128 RPS10P5Q9NQ39 176 aa6.6□□□□□ -1.35
VPS29-211ENST00000553128 LAMTOR3Q9UHA4 124 aa6.6□□□□□ -1.35
VPS29-211ENST00000553128 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
VPS29-211ENST00000553128 LINC00614P0C842 121 aa6.59□□□□□ -1.35
VPS29-211ENST00000553128 MAP1LC3CQ9BXW4 147 aa6.59□□□□□ -1.35
VPS29-211ENST00000553128 MYMXA0A1B0GTQ4 84 aa6.58□□□□□ -1.36
VPS29-211ENST00000553128 LINC00587B1AMM8 73 aa6.58□□□□□ -1.36
VPS29-211ENST00000553128 SLC25A34Q6PIV7 304 aa6.58□□□□□ -1.36
VPS29-211ENST00000553128 C18orf32Q8TCD1 76 aa6.57□□□□□ -1.36
VPS29-211ENST00000553128 PRO1933Q9H354 126 aa6.57□□□□□ -1.36
VPS29-211ENST00000553128 NDUFC2O95298 119 aa6.56□□□□□ -1.36
VPS29-211ENST00000553128 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
VPS29-211ENST00000553128 C20orf202A1L168 122 aa6.55□□□□□ -1.36
VPS29-211ENST00000553128 NPC2P61916 151 aa6.55□□□□□ -1.36
VPS29-211ENST00000553128 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
VPS29-211ENST00000553128 DEFB105AQ8NG35 78 aa6.55□□□□□ -1.36
VPS29-211ENST00000553128 TRAV12-1A0A0B4J245 112 aa6.54□□□□□ -1.36
VPS29-211ENST00000553128 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
VPS29-211ENST00000553128 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
VPS29-211ENST00000553128 NEBP20929 6669 aa6.54□□□□□ -1.36
VPS29-211ENST00000553128 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
VPS29-211ENST00000553128 KRTAP10-10P60014 251 aa6.53□□□□□ -1.36
VPS29-211ENST00000553128 MIEN1Q9BRT3 115 aa6.53□□□□□ -1.36
VPS29-211ENST00000553128 SEC11CQ9BY50 192 aa6.53□□□□□ -1.36
VPS29-211ENST00000553128 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
VPS29-211ENST00000553128 GHRHP01286 108 aa6.52□□□□□ -1.37
VPS29-211ENST00000553128 HINT1P49773 126 aaPredicted RBP6.52□□□□□ -1.37
VPS29-211ENST00000553128 AKR1D1P51857 326 aa6.52□□□□□ -1.37
VPS29-211ENST00000553128 Q75L30 129 aa6.52□□□□□ -1.37
VPS29-211ENST00000553128 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
VPS29-211ENST00000553128 TAL2Q16559 108 aa6.51□□□□□ -1.37
VPS29-211ENST00000553128 IFI27L1Q96BM0 104 aa6.51□□□□□ -1.37
VPS29-211ENST00000553128 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
VPS29-211ENST00000553128 S100PP25815 95 aa6.5□□□□□ -1.37
VPS29-211ENST00000553128 COX19Q49B96 90 aa6.5□□□□□ -1.37
VPS29-211ENST00000553128 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
VPS29-211ENST00000553128 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
VPS29-211ENST00000553128 LEPROTO15243 131 aa6.49□□□□□ -1.37
VPS29-211ENST00000553128 COMMD7Q86VX2 200 aa6.49□□□□□ -1.37
VPS29-211ENST00000553128 TEX49A0A1B0GTD5 131 aa6.48□□□□□ -1.37
VPS29-211ENST00000553128 PCP2Q8IVA1 136 aa6.48□□□□□ -1.37
VPS29-211ENST00000553128 ELOF1P60002 83 aaKnown RBP6.47□□□□□ -1.37
VPS29-211ENST00000553128 J3QQQ9 107 aa6.46□□□□□ -1.38
VPS29-211ENST00000553128 OR13C6PQ8NH95 151 aa6.46□□□□□ -1.38
VPS29-211ENST00000553128 TRAPPC1Q9Y5R8 145 aa6.46□□□□□ -1.38
VPS29-211ENST00000553128 H0Y8G0 127 aa6.45□□□□□ -1.38
VPS29-211ENST00000553128 TCL1BO95988 128 aa6.45□□□□□ -1.38
VPS29-211ENST00000553128 COX7BP24311 80 aa6.45□□□□□ -1.38
VPS29-211ENST00000553128 RHEBQ15382 184 aa6.45□□□□□ -1.38
VPS29-211ENST00000553128 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
VPS29-211ENST00000553128 IFITM2Q01629 132 aa6.44□□□□□ -1.38
VPS29-211ENST00000553128 C6orf99Q4VX62 202 aa6.44□□□□□ -1.38
VPS29-211ENST00000553128 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
VPS29-211ENST00000553128 C10orf91Q5T1B1 145 aa6.43□□□□□ -1.38
VPS29-211ENST00000553128 CBY1Q9Y3M2 126 aa6.43□□□□□ -1.38
VPS29-211ENST00000553128 TRBV20-1A0A075B6N2 111 aa6.42□□□□□ -1.38
VPS29-211ENST00000553128 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
VPS29-211ENST00000553128 TMEM218A2RU14 115 aa6.42□□□□□ -1.38
VPS29-211ENST00000553128 NMUP48645 174 aa6.42□□□□□ -1.38
VPS29-211ENST00000553128 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
VPS29-211ENST00000553128 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
VPS29-211ENST00000553128 Q96NJ1 140 aa6.4□□□□□ -1.38
VPS29-211ENST00000553128 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.38
VPS29-211ENST00000553128 SPANXCQ9NY87 97 aa6.4□□□□□ -1.38
VPS29-211ENST00000553128 LINC00308Q8TCZ7 52 aa6.39□□□□□ -1.39
VPS29-211ENST00000553128 CHCHD1Q96BP2 118 aaKnown RBP6.39□□□□□ -1.39
VPS29-211ENST00000553128 PMCHL2Q9BQD1 86 aa6.39□□□□□ -1.39
VPS29-211ENST00000553128 LITAFQ99732 161 aa6.38□□□□□ -1.39
VPS29-211ENST00000553128 SPANXDQ9BXN6 97 aa6.38□□□□□ -1.39
VPS29-211ENST00000553128 FAM236DA0A1B0GTK5 79 aa6.37□□□□□ -1.39
VPS29-211ENST00000553128 FAM236CP0DP71 79 aa6.37□□□□□ -1.39
VPS29-211ENST00000553128 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
VPS29-211ENST00000553128 A8MUU9 505 aa6.35□□□□□ -1.39
VPS29-211ENST00000553128 PLNP26678 52 aa6.35□□□□□ -1.39
VPS29-211ENST00000553128 HERVK_113P61574 105 aa6.35□□□□□ -1.39
VPS29-211ENST00000553128 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
VPS29-211ENST00000553128 IGFL1Q6UW32 110 aa6.34□□□□□ -1.39
VPS29-211ENST00000553128 UQCC3Q6UW78 93 aa6.34□□□□□ -1.39
VPS29-211ENST00000553128 DPM2O94777 84 aa6.33□□□□□ -1.4
VPS29-211ENST00000553128 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
VPS29-211ENST00000553128 TRBV7-6A0A0J9YX20 115 aa6.32□□□□□ -1.4
VPS29-211ENST00000553128 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
VPS29-211ENST00000553128 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
VPS29-211ENST00000553128 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
VPS29-211ENST00000553128 A0A1B0GWB2 263 aa6.31□□□□□ -1.4
VPS29-211ENST00000553128 HSBP1O75506 76 aa6.31□□□□□ -1.4
VPS29-211ENST00000553128 IGKCP01834 107 aa6.31□□□□□ -1.4
VPS29-211ENST00000553128 HRES1P13985 223 aa6.3□□□□□ -1.4
VPS29-211ENST00000553128 E9PLD3 99 aa6.29□□□□□ -1.4
VPS29-211ENST00000553128 LEPROTL1O95214 131 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms