RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 TCTE3Q8IZS6 198 aa7.3□□□□□ -1.24
VPS29-209ENST00000551655 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
VPS29-209ENST00000551655 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
VPS29-209ENST00000551655 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
VPS29-209ENST00000551655 SMIM29Q86T20 159 aa7.27□□□□□ -1.25
VPS29-209ENST00000551655 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
VPS29-209ENST00000551655 H3BS24 57 aa7.26□□□□□ -1.25
VPS29-209ENST00000551655 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
VPS29-209ENST00000551655 SPRR1BP22528 89 aa7.25□□□□□ -1.25
VPS29-209ENST00000551655 CD164Q04900 197 aa7.25□□□□□ -1.25
VPS29-209ENST00000551655 JOSD1Q15040 202 aaPredicted RBP7.25□□□□□ -1.25
VPS29-209ENST00000551655 LINC01549A6NIU2 74 aa7.24□□□□□ -1.25
VPS29-209ENST00000551655 Q1RN00 199 aa7.24□□□□□ -1.25
VPS29-209ENST00000551655 Q5XG85 94 aa7.24□□□□□ -1.25
VPS29-209ENST00000551655 TRAV23DV6A0A075B6W5 121 aa7.23□□□□□ -1.25
VPS29-209ENST00000551655 LAMTOR3Q9UHA4 124 aa7.23□□□□□ -1.25
VPS29-209ENST00000551655 A0A096LNJ9 63 aa7.22□□□□□ -1.25
VPS29-209ENST00000551655 PEA15Q15121 130 aa7.22□□□□□ -1.25
VPS29-209ENST00000551655 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
VPS29-209ENST00000551655 TRBV10-2A0A0K0K1G8 114 aa7.2□□□□□ -1.26
VPS29-209ENST00000551655 TMEM223A0PJW6 202 aa7.2□□□□□ -1.26
VPS29-209ENST00000551655 ZNF73O43830 326 aaPredicted RBP7.2□□□□□ -1.26
VPS29-209ENST00000551655 S100A7L2Q5SY68 101 aa7.2□□□□□ -1.26
VPS29-209ENST00000551655 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
VPS29-209ENST00000551655 FA2HQ7L5A8 372 aa7.2□□□□□ -1.26
VPS29-209ENST00000551655 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
VPS29-209ENST00000551655 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
VPS29-209ENST00000551655 Q75L30 129 aa7.19□□□□□ -1.26
VPS29-209ENST00000551655 C5orf52A6NGY3 159 aa7.18□□□□□ -1.26
VPS29-209ENST00000551655 OBSCN-AS1Q96MR7 158 aa7.18□□□□□ -1.26
VPS29-209ENST00000551655 SMCO4Q9NRQ5 59 aa7.18□□□□□ -1.26
VPS29-209ENST00000551655 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
VPS29-209ENST00000551655 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
VPS29-209ENST00000551655 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
VPS29-209ENST00000551655 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
VPS29-209ENST00000551655 DEFB105AQ8NG35 78 aa7.16□□□□□ -1.26
VPS29-209ENST00000551655 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
VPS29-209ENST00000551655 LOC107984156A0A0G2JMH3 177 aa7.14□□□□□ -1.27
VPS29-209ENST00000551655 MT-ND4LP03901 98 aa7.14□□□□□ -1.27
VPS29-209ENST00000551655 HERV-K104P63124 156 aa7.14□□□□□ -1.27
VPS29-209ENST00000551655 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
VPS29-209ENST00000551655 ANAPC16Q96DE5 110 aa7.14□□□□□ -1.27
VPS29-209ENST00000551655 AKR1D1P51857 326 aa7.13□□□□□ -1.27
VPS29-209ENST00000551655 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
VPS29-209ENST00000551655 MAP1LC3CQ9BXW4 147 aa7.13□□□□□ -1.27
VPS29-209ENST00000551655 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
VPS29-209ENST00000551655 HBDP02042 147 aa7.12□□□□□ -1.27
VPS29-209ENST00000551655 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
VPS29-209ENST00000551655 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
VPS29-209ENST00000551655 TAL2Q16559 108 aa7.11□□□□□ -1.27
VPS29-209ENST00000551655 RPS10P5Q9NQ39 176 aa7.11□□□□□ -1.27
VPS29-209ENST00000551655 TSPEAR-AS2P59090 65 aa7.1□□□□□ -1.27
VPS29-209ENST00000551655 NPC2P61916 151 aa7.1□□□□□ -1.27
VPS29-209ENST00000551655 C10orf91Q5T1B1 145 aa7.1□□□□□ -1.27
VPS29-209ENST00000551655 MYMXA0A1B0GTQ4 84 aa7.09□□□□□ -1.27
VPS29-209ENST00000551655 LINC00587B1AMM8 73 aa7.09□□□□□ -1.27
VPS29-209ENST00000551655 SOSTDC1Q6X4U4 206 aa7.09□□□□□ -1.27
VPS29-209ENST00000551655 DHRS4-AS1Q9P1J3 65 aa7.09□□□□□ -1.27
VPS29-209ENST00000551655 NDUFC2O95298 119 aa7.08□□□□□ -1.28
VPS29-209ENST00000551655 TCL1BO95988 128 aa7.08□□□□□ -1.28
VPS29-209ENST00000551655 HINT1P49773 126 aaPredicted RBP7.08□□□□□ -1.28
VPS29-209ENST00000551655 MIEN1Q9BRT3 115 aa7.08□□□□□ -1.28
VPS29-209ENST00000551655 KRTAP5-3Q6L8H2 238 aa7.07□□□□□ -1.28
VPS29-209ENST00000551655 TEX49A0A1B0GTD5 131 aa7.06□□□□□ -1.28
VPS29-209ENST00000551655 Q96NJ1 140 aa7.06□□□□□ -1.28
VPS29-209ENST00000551655 MDN1Q9NU22 5596 aa7.05□□□□□ -1.28
VPS29-209ENST00000551655 LINC00614P0C842 121 aa7.03□□□□□ -1.28
VPS29-209ENST00000551655 FABP9Q0Z7S8 132 aa7.03□□□□□ -1.28
VPS29-209ENST00000551655 COMMD7Q86VX2 200 aa7.03□□□□□ -1.28
VPS29-209ENST00000551655 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
VPS29-209ENST00000551655 COX7BP24311 80 aa7.01□□□□□ -1.29
VPS29-209ENST00000551655 ELOF1P60002 83 aaKnown RBP7.01□□□□□ -1.29
VPS29-209ENST00000551655 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
VPS29-209ENST00000551655 OR13C6PQ8NH95 151 aa7.01□□□□□ -1.29
VPS29-209ENST00000551655 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
VPS29-209ENST00000551655 IGFL1Q6UW32 110 aa7□□□□□ -1.29
VPS29-209ENST00000551655 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
VPS29-209ENST00000551655 C18orf32Q8TCD1 76 aa7□□□□□ -1.29
VPS29-209ENST00000551655 KMT2DO14686 5537 aa6.99□□□□□ -1.29
VPS29-209ENST00000551655 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
VPS29-209ENST00000551655 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
VPS29-209ENST00000551655 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
VPS29-209ENST00000551655 A8MUU9 505 aa6.98□□□□□ -1.29
VPS29-209ENST00000551655 HRES1P13985 223 aa6.98□□□□□ -1.29
VPS29-209ENST00000551655 MPLKIPQ8TAP9 179 aa6.98□□□□□ -1.29
VPS29-209ENST00000551655 RHEBQ15382 184 aa6.97□□□□□ -1.29
VPS29-209ENST00000551655 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.3
VPS29-209ENST00000551655 LEPROTO15243 131 aa6.96□□□□□ -1.3
VPS29-209ENST00000551655 IFI27L1Q96BM0 104 aa6.96□□□□□ -1.3
VPS29-209ENST00000551655 SEC11CQ9BY50 192 aa6.95□□□□□ -1.3
VPS29-209ENST00000551655 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
VPS29-209ENST00000551655 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
VPS29-209ENST00000551655 J3QQQ9 107 aa6.94□□□□□ -1.3
VPS29-209ENST00000551655 LINC00310P59036 64 aa6.94□□□□□ -1.3
VPS29-209ENST00000551655 H0Y8G0 127 aa6.92□□□□□ -1.3
VPS29-209ENST00000551655 IFITM2Q01629 132 aa6.92□□□□□ -1.3
VPS29-209ENST00000551655 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
VPS29-209ENST00000551655 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
VPS29-209ENST00000551655 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
VPS29-209ENST00000551655 A0A0J9YXY3 114 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms