RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 FAM168BA1KXE4 195 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 PFN2P35080 140 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
NPIPB3-210ENST00000542817 A0A087WYN8 130 aa6.73□□□□□ -1.33
NPIPB3-210ENST00000542817 EIF4EBP3O60516 100 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-210ENST00000542817 HERV-K104P63124 156 aa6.73□□□□□ -1.33
NPIPB3-210ENST00000542817 COX17Q14061 63 aa6.73□□□□□ -1.33
NPIPB3-210ENST00000542817 XAGE1AQ9HD64 81 aa6.73□□□□□ -1.33
NPIPB3-210ENST00000542817 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
NPIPB3-210ENST00000542817 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
NPIPB3-210ENST00000542817 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
NPIPB3-210ENST00000542817 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
NPIPB3-210ENST00000542817 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
NPIPB3-210ENST00000542817 SERTAD4-AS1Q5TG53 156 aa6.71□□□□□ -1.34
NPIPB3-210ENST00000542817 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
NPIPB3-210ENST00000542817 LST1O00453 97 aa6.7□□□□□ -1.34
NPIPB3-210ENST00000542817 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
NPIPB3-210ENST00000542817 DAND5Q8N907 189 aa6.7□□□□□ -1.34
NPIPB3-210ENST00000542817 LINC00474Q9P2X8 69 aa6.7□□□□□ -1.34
NPIPB3-210ENST00000542817 TRIAP1O43715 76 aa6.69□□□□□ -1.34
NPIPB3-210ENST00000542817 LINC00158P58513 81 aa6.69□□□□□ -1.34
NPIPB3-210ENST00000542817 MYCBP2O75592 4640 aa6.69□□□□□ -1.34
NPIPB3-210ENST00000542817 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
NPIPB3-210ENST00000542817 MEIG1Q5JSS6 88 aa6.68□□□□□ -1.34
NPIPB3-210ENST00000542817 KRTAP11-1Q8IUC1 163 aa6.68□□□□□ -1.34
NPIPB3-210ENST00000542817 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
NPIPB3-210ENST00000542817 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
NPIPB3-210ENST00000542817 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
NPIPB3-210ENST00000542817 VPREB1P12018 145 aa6.67□□□□□ -1.34
NPIPB3-210ENST00000542817 Q1RN00 199 aa6.67□□□□□ -1.34
NPIPB3-210ENST00000542817 LINC00643Q86TS7 51 aa6.67□□□□□ -1.34
NPIPB3-210ENST00000542817 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
NPIPB3-210ENST00000542817 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
NPIPB3-210ENST00000542817 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
NPIPB3-210ENST00000542817 PHF5AQ7RTV0 110 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-210ENST00000542817 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
NPIPB3-210ENST00000542817 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-210ENST00000542817 A0A1B0GX51 115 aa6.65□□□□□ -1.35
NPIPB3-210ENST00000542817 SMR3BP02814 79 aaPredicted RBP6.65□□□□□ -1.35
NPIPB3-210ENST00000542817 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.35
NPIPB3-210ENST00000542817 PRR3P79522 188 aaKnown RBP6.65□□□□□ -1.35
NPIPB3-210ENST00000542817 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.35
NPIPB3-210ENST00000542817 C22orf24Q9Y442 160 aa6.65□□□□□ -1.35
NPIPB3-210ENST00000542817 UQCRQO14949 82 aa6.64□□□□□ -1.35
NPIPB3-210ENST00000542817 TRACP01848 142 aa6.64□□□□□ -1.35
NPIPB3-210ENST00000542817 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
NPIPB3-210ENST00000542817 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
NPIPB3-210ENST00000542817 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
NPIPB3-210ENST00000542817 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
NPIPB3-210ENST00000542817 NPC2P61916 151 aa6.63□□□□□ -1.35
NPIPB3-210ENST00000542817 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
NPIPB3-210ENST00000542817 IGKV2-28A0A075B6P5 120 aa6.61□□□□□ -1.35
NPIPB3-210ENST00000542817 IGKV2D-28P01615 120 aa6.61□□□□□ -1.35
NPIPB3-210ENST00000542817 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
NPIPB3-210ENST00000542817 C7orf33Q8WU49 177 aa6.61□□□□□ -1.35
NPIPB3-210ENST00000542817 LINC00167Q96N53 147 aa6.61□□□□□ -1.35
NPIPB3-210ENST00000542817 H7C2G1 150 aa6.6□□□□□ -1.35
NPIPB3-210ENST00000542817 INAFM2P0DMQ5 153 aa6.6□□□□□ -1.35
NPIPB3-210ENST00000542817 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
NPIPB3-210ENST00000542817 Q8N1X5 172 aa6.6□□□□□ -1.35
NPIPB3-210ENST00000542817 NDUFC2O95298 119 aa6.59□□□□□ -1.35
NPIPB3-210ENST00000542817 CRYGAP11844 174 aa6.59□□□□□ -1.35
NPIPB3-210ENST00000542817 NCR3O14931 201 aa6.58□□□□□ -1.36
NPIPB3-210ENST00000542817 COX7CP15954 63 aa6.58□□□□□ -1.36
NPIPB3-210ENST00000542817 HIST1H4AP62805 103 aaKnown RBP6.58□□□□□ -1.36
NPIPB3-210ENST00000542817 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
NPIPB3-210ENST00000542817 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
NPIPB3-210ENST00000542817 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
NPIPB3-210ENST00000542817 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 M0R378 163 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 ATOX1O00244 68 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 IGLV6-57P01721 117 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 C5orf47Q569G3 176 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 C9orf153Q5TBE3 101 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 Q5VSD8 79 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 CLEC2BQ92478 149 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 TNXBP22105 4242 aa6.56□□□□□ -1.36
NPIPB3-210ENST00000542817 J3KT08 172 aa6.55□□□□□ -1.36
NPIPB3-210ENST00000542817 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
NPIPB3-210ENST00000542817 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-210ENST00000542817 BAALC-AS2P0C853 105 aa6.54□□□□□ -1.36
NPIPB3-210ENST00000542817 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-210ENST00000542817 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-210ENST00000542817 RPL37AP61513 92 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-210ENST00000542817 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
NPIPB3-210ENST00000542817 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
NPIPB3-210ENST00000542817 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
NPIPB3-210ENST00000542817 H0YGX0 51 aa6.52□□□□□ -1.37
NPIPB3-210ENST00000542817 SPRR1AP35321 89 aa6.52□□□□□ -1.37
NPIPB3-210ENST00000542817 UBE2BP63146 152 aa6.52□□□□□ -1.37
NPIPB3-210ENST00000542817 OBSCN-AS1Q96MR7 158 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms