RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 H3BQ85 93 aa9.15□□□□□ -0.94
SCNN1A-215ENST00000540037 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.95
SCNN1A-215ENST00000540037 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
SCNN1A-215ENST00000540037 EGFEM1PQ0D2K5 195 aa9.13□□□□□ -0.95
SCNN1A-215ENST00000540037 HIGD2AQ9BW72 106 aa9.13□□□□□ -0.95
SCNN1A-215ENST00000540037 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
SCNN1A-215ENST00000540037 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
SCNN1A-215ENST00000540037 RETNQ9HD89 108 aa9.12□□□□□ -0.95
SCNN1A-215ENST00000540037 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
SCNN1A-215ENST00000540037 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
SCNN1A-215ENST00000540037 Q8N377 158 aa9.11□□□□□ -0.95
SCNN1A-215ENST00000540037 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
SCNN1A-215ENST00000540037 NDUFC1O43677 76 aa9.1□□□□□ -0.95
SCNN1A-215ENST00000540037 KPRPQ5T749 579 aaPredicted RBP9.1□□□□□ -0.95
SCNN1A-215ENST00000540037 F8P00451 2351 aa9.1□□□□□ -0.95
SCNN1A-215ENST00000540037 ANK2Q01484 3957 aa9.09□□□□□ -0.95
SCNN1A-215ENST00000540037 HECTD1Q9ULT8 2610 aa9.09□□□□□ -0.95
SCNN1A-215ENST00000540037 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
SCNN1A-215ENST00000540037 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
SCNN1A-215ENST00000540037 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
SCNN1A-215ENST00000540037 PRYO14603 147 aa9.08□□□□□ -0.96
SCNN1A-215ENST00000540037 PRO0628Q9UI54 55 aa9.08□□□□□ -0.96
SCNN1A-215ENST00000540037 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
SCNN1A-215ENST00000540037 NSD1Q96L73 2696 aaPredicted RBP9.07□□□□□ -0.96
SCNN1A-215ENST00000540037 IGKV2D-24A0A075B6R9 120 aa9.07□□□□□ -0.96
SCNN1A-215ENST00000540037 Q6ZTC4 211 aa9.07□□□□□ -0.96
SCNN1A-215ENST00000540037 C7orf33Q8WU49 177 aa9.07□□□□□ -0.96
SCNN1A-215ENST00000540037 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
SCNN1A-215ENST00000540037 ESRGQ1W209 222 aa9.06□□□□□ -0.96
SCNN1A-215ENST00000540037 MRAPQ8TCY5 172 aa9.06□□□□□ -0.96
SCNN1A-215ENST00000540037 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
SCNN1A-215ENST00000540037 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
SCNN1A-215ENST00000540037 A0A1W2PNM2 257 aa9.05□□□□□ -0.96
SCNN1A-215ENST00000540037 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
SCNN1A-215ENST00000540037 ERC2-IT1O76042 136 aa9.04□□□□□ -0.96
SCNN1A-215ENST00000540037 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
SCNN1A-215ENST00000540037 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCNN1A-215ENST00000540037 Q9BRP9 147 aa9.04□□□□□ -0.96
SCNN1A-215ENST00000540037 LRCOL1A6NCL2 159 aa9.03□□□□□ -0.96
SCNN1A-215ENST00000540037 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
SCNN1A-215ENST00000540037 KCNQ1DNQ9H478 68 aa9.03□□□□□ -0.96
SCNN1A-215ENST00000540037 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
SCNN1A-215ENST00000540037 A0A0G2JQZ4 141 aa9.02□□□□□ -0.97
SCNN1A-215ENST00000540037 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
SCNN1A-215ENST00000540037 INAFM1C9JVW0 142 aa9.02□□□□□ -0.97
SCNN1A-215ENST00000540037 F8WDY8 70 aa9.02□□□□□ -0.97
SCNN1A-215ENST00000540037 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
SCNN1A-215ENST00000540037 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
SCNN1A-215ENST00000540037 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
SCNN1A-215ENST00000540037 Q6ZRX8 168 aa8.98□□□□□ -0.97
SCNN1A-215ENST00000540037 FLNBO75369 2602 aaKnown RBP8.98□□□□□ -0.97
SCNN1A-215ENST00000540037 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
SCNN1A-215ENST00000540037 K7EQZ3 153 aa8.97□□□□□ -0.97
SCNN1A-215ENST00000540037 DSCR10P59022 87 aa8.96□□□□□ -0.97
SCNN1A-215ENST00000540037 KRTAP4-16G5E9R7 235 aaPredicted RBP8.96□□□□□ -0.98
SCNN1A-215ENST00000540037 TNP2Q05952 138 aa8.96□□□□□ -0.98
SCNN1A-215ENST00000540037 DEFB116Q30KQ4 102 aa8.96□□□□□ -0.98
SCNN1A-215ENST00000540037 PRR4Q16378 134 aa8.95□□□□□ -0.98
SCNN1A-215ENST00000540037 SRRM2Q9UQ35 2752 aaKnown RBP8.94□□□□□ -0.98
SCNN1A-215ENST00000540037 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
SCNN1A-215ENST00000540037 IGLV1-50A0A075B6I6 118 aa8.94□□□□□ -0.98
SCNN1A-215ENST00000540037 PRB2P02812 416 aaPredicted RBP8.94□□□□□ -0.98
SCNN1A-215ENST00000540037 Q8NBF4 154 aa8.94□□□□□ -0.98
SCNN1A-215ENST00000540037 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
SCNN1A-215ENST00000540037 DHRS4-AS1Q9P1J3 65 aa8.93□□□□□ -0.98
SCNN1A-215ENST00000540037 MAST4O15021 2626 aa8.93□□□□□ -0.98
SCNN1A-215ENST00000540037 KRTAP10-11P60412 298 aa8.92□□□□□ -0.98
SCNN1A-215ENST00000540037 H3BNG1 76 aa8.91□□□□□ -0.98
SCNN1A-215ENST00000540037 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
SCNN1A-215ENST00000540037 DEFB131BA0A096LNP1 70 aa8.91□□□□□ -0.98
SCNN1A-215ENST00000540037 UBE2BP63146 152 aa8.91□□□□□ -0.98
SCNN1A-215ENST00000540037 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
SCNN1A-215ENST00000540037 hDV103S1A0JD37 113 aa8.9□□□□□ -0.98
SCNN1A-215ENST00000540037 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.9□□□□□ -0.99
SCNN1A-215ENST00000540037 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.99
SCNN1A-215ENST00000540037 NOTCH1P46531 2555 aa8.89□□□□□ -0.99
SCNN1A-215ENST00000540037 LCE6AA0A183 80 aa8.89□□□□□ -0.99
SCNN1A-215ENST00000540037 SPRR1AP35321 89 aa8.89□□□□□ -0.99
SCNN1A-215ENST00000540037 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
SCNN1A-215ENST00000540037 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
SCNN1A-215ENST00000540037 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
SCNN1A-215ENST00000540037 LINC00476Q8WZB0 136 aa8.86□□□□□ -0.99
SCNN1A-215ENST00000540037 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
SCNN1A-215ENST00000540037 WFDC13Q8IUB5 93 aa8.86□□□□□ -0.99
SCNN1A-215ENST00000540037 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
SCNN1A-215ENST00000540037 LYSTQ99698 3801 aa8.85□□□□□ -0.99
SCNN1A-215ENST00000540037 PSCAO43653 123 aa8.85□□□□□ -0.99
SCNN1A-215ENST00000540037 PSPHP1O15172 72 aa8.84□□□□□ -0.99
SCNN1A-215ENST00000540037 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
SCNN1A-215ENST00000540037 C11orf45Q8TAV5 145 aa8.84□□□□□ -0.99
SCNN1A-215ENST00000540037 HCG22E2RYF7 251 aa8.83□□□□□ -1
SCNN1A-215ENST00000540037 PLA2G2DQ9UNK4 145 aa8.83□□□□□ -1
SCNN1A-215ENST00000540037 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
SCNN1A-215ENST00000540037 DNAH10OSP0CZ25 163 aa8.83□□□□□ -1
SCNN1A-215ENST00000540037 KMT2BQ9UMN6 2715 aaPredicted RBP8.83□□□□□ -1
SCNN1A-215ENST00000540037 PRLHP81277 87 aa8.83□□□□□ -1
SCNN1A-215ENST00000540037 IGFL1Q6UW32 110 aa8.83□□□□□ -1
SCNN1A-215ENST00000540037 DNAH1Q9P2D7 4330 aa8.82□□□□□ -1
SCNN1A-215ENST00000540037 A0A1B0GW54 56 aa8.82□□□□□ -1
SCNN1A-215ENST00000540037 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms