RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TRBV10-1A0A0K0K1A3 114 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 CCDC179H3BU77 68 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 APOC4-APOC2K7ER74 178 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 SNCGO76070 127 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 APOC2P02655 101 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 HMGN2P05204 90 aaKnown RBP1.19□□□□□ -2.22
TRAV11-201ENST00000539512 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 AKAIN1P0CW23 69 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 EDDM3BP56851 147 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 TPPP2P59282 170 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 MINOS1Q5TGZ0 78 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 SPANXN1Q5VSR9 72 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 MYOZ3Q8TDC0 251 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 TMEM203Q969S6 136 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 SPTSSAQ969W0 71 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
TRAV11-201ENST00000539512 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 F6UZH7 168 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 M0R2T5 61 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 SNAPC5O75971 98 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 IFNGP01579 166 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 CCKP06307 115 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 FGF7P21781 194 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 CCL18P55774 89 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 CAV3P56539 151 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 DEFB114Q30KQ6 69 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 S100A7L2Q5SY68 101 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 SPATA8Q6RVD6 105 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 COPS9Q8WXC6 57 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 CGREF1Q99674 301 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 AGPAT4-IT1Q9H0P7 198 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 SCN3BQ9NY72 215 aa1.18□□□□□ -2.22
TRAV11-201ENST00000539512 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
TRAV11-201ENST00000539512 LOC101927531A0A1B0GV80 90 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 HIGD1CA8MV81 97 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 IQCF6A8MYZ5 107 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 S100A1P23297 94 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 INSL4Q14641 139 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 WHAMMP3Q1A5X7 153 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 RPL7L1Q6DKI1 246 aaKnown RBP1.17□□□□□ -2.22
TRAV11-201ENST00000539512 RPS27LQ71UM5 84 aaKnown RBP1.17□□□□□ -2.22
TRAV11-201ENST00000539512 PP6455Q8WZ26 134 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 LEAP2Q969E1 77 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 LINC01600Q96MT4 127 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 FAM103A1Q9BTL3 118 aaKnown RBP1.17□□□□□ -2.22
TRAV11-201ENST00000539512 RERGLQ9H628 205 aa1.17□□□□□ -2.22
TRAV11-201ENST00000539512 MRPL35Q9NZE8 188 aaKnown RBP1.17□□□□□ -2.22
TRAV11-201ENST00000539512 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 NDUFB6O95139 128 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 UBE2G1P62253 170 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 MT1HP80294 61 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 Q86TA4 180 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 LSM10Q969L4 123 aaKnown RBP1.16□□□□□ -2.22
TRAV11-201ENST00000539512 IFI27L1Q96BM0 104 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 TMEM141Q96I45 108 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 DPY30Q9C005 99 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 NAA60Q9H7X0 242 aa1.16□□□□□ -2.22
TRAV11-201ENST00000539512 TCRBV3S1A0A5B6 114 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 A6NIN4 97 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 MIF4GDA9UHW6 222 aaKnown RBP1.15□□□□□ -2.23
TRAV11-201ENST00000539512 SPART-AS1P0CW21 52 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 S100PP25815 95 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 Q6ZQY7 126 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 C4orf33Q8N1A6 199 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 TSKUQ8WUA8 353 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 SERP1Q9Y6X1 66 aa1.15□□□□□ -2.23
TRAV11-201ENST00000539512 TRAV12-3A0A0B4J271 114 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 MCRIP1C9JLW8 97 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 CORTO00230 105 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 APELAP0DMC3 54 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 CBLN1P23435 193 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 FXYD3Q14802 87 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 C9orf116Q5BN46 136 aaPredicted RBP1.14□□□□□ -2.23
TRAV11-201ENST00000539512 XAF1Q6GPH4 301 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 SPTSSBQ8NFR3 76 aa1.14□□□□□ -2.23
TRAV11-201ENST00000539512 FXYD1O00168 92 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 DEFB130BP0DP73 79 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 DEFB130AP0DP74 79 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 NPC2P61916 151 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 MRPS10P82664 201 aaKnown RBP1.13□□□□□ -2.23
TRAV11-201ENST00000539512 PLGLAQ15195 96 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 Q56UQ5 140 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 SPINK9Q5DT21 86 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 Q6AWC8 147 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 CYP2G1PQ6ZSU1 146 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 LINC00208Q96KT6 92 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 RPRMQ9NS64 109 aa1.13□□□□□ -2.23
TRAV11-201ENST00000539512 A0A1B0GWA3 101 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 OOSP1A8MZH6 123 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 PRH1P02810 166 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 GNG4P50150 75 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 RBM3P98179 157 aaKnown RBP1.12□□□□□ -2.23
TRAV11-201ENST00000539512 CATR1Q13166 79 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 WFDC2Q14508 124 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 C10orf128Q5T292 105 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 MRPL54Q6P161 138 aaKnown RBP1.12□□□□□ -2.23
TRAV11-201ENST00000539512 C12orf57Q99622 126 aa1.12□□□□□ -2.23
TRAV11-201ENST00000539512 TMEM14BQ9NUH8 114 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms