RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TNXBP22105 4242 aa7.17□□□□□ -1.26
SSBP3-214ENST00000533209 ETDCA0A1B0GVM5 59 aa7.17□□□□□ -1.26
SSBP3-214ENST00000533209 S100A12P80511 92 aa7.17□□□□□ -1.26
SSBP3-214ENST00000533209 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
SSBP3-214ENST00000533209 COPS9Q8WXC6 57 aa7.17□□□□□ -1.26
SSBP3-214ENST00000533209 VAMP8Q9BV40 100 aa7.17□□□□□ -1.26
SSBP3-214ENST00000533209 TRAV23DV6A0A075B6W5 121 aa7.16□□□□□ -1.26
SSBP3-214ENST00000533209 B5MCH6 92 aa7.16□□□□□ -1.26
SSBP3-214ENST00000533209 DLEU1O43261 78 aa7.16□□□□□ -1.26
SSBP3-214ENST00000533209 LINC00518Q8N0U6 118 aa7.16□□□□□ -1.26
SSBP3-214ENST00000533209 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
SSBP3-214ENST00000533209 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
SSBP3-214ENST00000533209 HIGD2AQ9BW72 106 aa7.15□□□□□ -1.26
SSBP3-214ENST00000533209 ZNF73O43830 326 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-214ENST00000533209 SMCR5Q8TEV8 140 aa7.13□□□□□ -1.27
SSBP3-214ENST00000533209 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
SSBP3-214ENST00000533209 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
SSBP3-214ENST00000533209 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
SSBP3-214ENST00000533209 Q6ZRX8 168 aa7.12□□□□□ -1.27
SSBP3-214ENST00000533209 Q9BRP9 147 aa7.12□□□□□ -1.27
SSBP3-214ENST00000533209 A0A087X002 238 aa7.11□□□□□ -1.27
SSBP3-214ENST00000533209 C2orf91Q6ZV80 131 aa7.11□□□□□ -1.27
SSBP3-214ENST00000533209 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
SSBP3-214ENST00000533209 HIGD1BQ9P298 99 aa7.11□□□□□ -1.27
SSBP3-214ENST00000533209 A4D1N5 150 aa7.1□□□□□ -1.27
SSBP3-214ENST00000533209 A6NDN8 102 aa7.1□□□□□ -1.27
SSBP3-214ENST00000533209 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
SSBP3-214ENST00000533209 RPL13AP40429 203 aaKnown RBP7.1□□□□□ -1.27
SSBP3-214ENST00000533209 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
SSBP3-214ENST00000533209 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
SSBP3-214ENST00000533209 CRYGAP11844 174 aa7.09□□□□□ -1.27
SSBP3-214ENST00000533209 FAM229BQ4G0N7 80 aa7.09□□□□□ -1.27
SSBP3-214ENST00000533209 C6orf99Q4VX62 202 aa7.08□□□□□ -1.28
SSBP3-214ENST00000533209 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
SSBP3-214ENST00000533209 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
SSBP3-214ENST00000533209 HINT1P49773 126 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-214ENST00000533209 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-214ENST00000533209 ELOF1P60002 83 aaKnown RBP7.06□□□□□ -1.28
SSBP3-214ENST00000533209 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
SSBP3-214ENST00000533209 COX7BP24311 80 aa7.05□□□□□ -1.28
SSBP3-214ENST00000533209 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
SSBP3-214ENST00000533209 SMIM11BQ8TCY0 68 aa7.05□□□□□ -1.28
SSBP3-214ENST00000533209 C12orf57Q99622 126 aa7.05□□□□□ -1.28
SSBP3-214ENST00000533209 TAL2Q16559 108 aa7.04□□□□□ -1.28
SSBP3-214ENST00000533209 LINC00483Q53H64 154 aa7.04□□□□□ -1.28
SSBP3-214ENST00000533209 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
SSBP3-214ENST00000533209 CEND1Q8N111 149 aa7.03□□□□□ -1.28
SSBP3-214ENST00000533209 C3orf22Q8N5N4 141 aa7.03□□□□□ -1.28
SSBP3-214ENST00000533209 DHRS4-AS1Q9P1J3 65 aa7.03□□□□□ -1.28
SSBP3-214ENST00000533209 A0A1B0GWB2 263 aa7.02□□□□□ -1.29
SSBP3-214ENST00000533209 CFC1BP0CG36 223 aa7.02□□□□□ -1.29
SSBP3-214ENST00000533209 CFC1P0CG37 223 aa7.02□□□□□ -1.29
SSBP3-214ENST00000533209 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
SSBP3-214ENST00000533209 UQCR10Q9UDW1 63 aa7.01□□□□□ -1.29
SSBP3-214ENST00000533209 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
SSBP3-214ENST00000533209 FXYD2P54710 66 aa6.99□□□□□ -1.29
SSBP3-214ENST00000533209 LOC105371267A0A1B0GV96 52 aa6.98□□□□□ -1.29
SSBP3-214ENST00000533209 SMIM6P0DI80 62 aa6.98□□□□□ -1.29
SSBP3-214ENST00000533209 HSD52Q0P140 79 aa6.98□□□□□ -1.29
SSBP3-214ENST00000533209 RAB37Q96AX2 223 aa6.98□□□□□ -1.29
SSBP3-214ENST00000533209 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
SSBP3-214ENST00000533209 A6NJY4 79 aa6.97□□□□□ -1.29
SSBP3-214ENST00000533209 SPRR1BP22528 89 aa6.97□□□□□ -1.29
SSBP3-214ENST00000533209 VAMP3Q15836 100 aa6.97□□□□□ -1.29
SSBP3-214ENST00000533209 LINC00304Q8N9R0 145 aa6.97□□□□□ -1.29
SSBP3-214ENST00000533209 H7C2G1 150 aa6.96□□□□□ -1.3
SSBP3-214ENST00000533209 TSPAN13O95857 204 aa6.96□□□□□ -1.3
SSBP3-214ENST00000533209 LINC00575Q6W349 94 aa6.96□□□□□ -1.3
SSBP3-214ENST00000533209 PRO1933Q9H354 126 aa6.96□□□□□ -1.3
SSBP3-214ENST00000533209 IGLV9-49A0A0B4J1Y8 123 aa6.95□□□□□ -1.3
SSBP3-214ENST00000533209 MOBPQ13875 183 aa6.95□□□□□ -1.3
SSBP3-214ENST00000533209 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
SSBP3-214ENST00000533209 PRO1854Q9UHT4 67 aa6.95□□□□□ -1.3
SSBP3-214ENST00000533209 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-214ENST00000533209 BVES-AS1Q5T3Y7 98 aa6.94□□□□□ -1.3
SSBP3-214ENST00000533209 Q8NBF4 154 aa6.94□□□□□ -1.3
SSBP3-214ENST00000533209 IGLV5-48A0A075B6I7 105 aa6.93□□□□□ -1.3
SSBP3-214ENST00000533209 SSBP3-AS1Q7Z2R9 100 aa6.93□□□□□ -1.3
SSBP3-214ENST00000533209 DEFB105AQ8NG35 78 aa6.93□□□□□ -1.3
SSBP3-214ENST00000533209 TEX49A0A1B0GTD5 131 aa6.92□□□□□ -1.3
SSBP3-214ENST00000533209 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
SSBP3-214ENST00000533209 SLC25A20O43772 301 aa6.92□□□□□ -1.3
SSBP3-214ENST00000533209 CTAG1AP78358 180 aa6.91□□□□□ -1.3
SSBP3-214ENST00000533209 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
SSBP3-214ENST00000533209 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
SSBP3-214ENST00000533209 LRP2P98164 4655 aa6.91□□□□□ -1.3
SSBP3-214ENST00000533209 K7ERJ3 54 aa6.9□□□□□ -1.3
SSBP3-214ENST00000533209 Q1RN00 199 aa6.9□□□□□ -1.3
SSBP3-214ENST00000533209 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
SSBP3-214ENST00000533209 SMIM29Q86T20 159 aa6.9□□□□□ -1.3
SSBP3-214ENST00000533209 Q8N377 158 aa6.9□□□□□ -1.3
SSBP3-214ENST00000533209 C4orf48Q5BLP8 95 aa6.89□□□□□ -1.31
SSBP3-214ENST00000533209 Q6ZQY7 126 aa6.89□□□□□ -1.31
SSBP3-214ENST00000533209 H0YGX0 51 aa6.88□□□□□ -1.31
SSBP3-214ENST00000533209 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
SSBP3-214ENST00000533209 TRIAP1O43715 76 aa6.87□□□□□ -1.31
SSBP3-214ENST00000533209 SPINK1P00995 79 aa6.87□□□□□ -1.31
SSBP3-214ENST00000533209 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.87□□□□□ -1.31
SSBP3-214ENST00000533209 PRR4Q16378 134 aa6.86□□□□□ -1.31
SSBP3-214ENST00000533209 RETNLBQ9BQ08 111 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms