RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 TCTE3Q8IZS6 198 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 Q9BRP9 147 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 KCNQ1DNQ9H478 68 aa4.23□□□□□ -1.73
USP48-212ENST00000527823 NXT2Q9NPJ8 142 aaKnown RBP4.23□□□□□ -1.73
USP48-212ENST00000527823 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
USP48-212ENST00000527823 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
USP48-212ENST00000527823 SCGB3A1Q96QR1 104 aa4.22□□□□□ -1.73
USP48-212ENST00000527823 CST9LQ9H4G1 147 aa4.22□□□□□ -1.73
USP48-212ENST00000527823 H3BRM9 83 aa4.21□□□□□ -1.74
USP48-212ENST00000527823 IGLC3P0DOY3 106 aa4.21□□□□□ -1.74
USP48-212ENST00000527823 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.74
USP48-212ENST00000527823 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
USP48-212ENST00000527823 PMVKQ15126 192 aa4.2□□□□□ -1.74
USP48-212ENST00000527823 Q6ZVQ6 151 aa4.2□□□□□ -1.74
USP48-212ENST00000527823 LIMD2Q9BT23 127 aa4.2□□□□□ -1.74
USP48-212ENST00000527823 A0A0U1RRA0 63 aa4.19□□□□□ -1.74
USP48-212ENST00000527823 A4D1N5 150 aa4.19□□□□□ -1.74
USP48-212ENST00000527823 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
USP48-212ENST00000527823 Q6ZRX8 168 aa4.19□□□□□ -1.74
USP48-212ENST00000527823 G0S2P27469 103 aa4.18□□□□□ -1.74
USP48-212ENST00000527823 LINC00158P58513 81 aa4.18□□□□□ -1.74
USP48-212ENST00000527823 HRCT1Q6UXD1 115 aa4.18□□□□□ -1.74
USP48-212ENST00000527823 BOD1L2Q8IYS8 172 aa4.18□□□□□ -1.74
USP48-212ENST00000527823 MT2AP02795 61 aa4.17□□□□□ -1.74
USP48-212ENST00000527823 SFTA2Q6UW10 78 aa4.17□□□□□ -1.74
USP48-212ENST00000527823 NEBP20929 6669 aa4.17□□□□□ -1.74
USP48-212ENST00000527823 LINC01546A6NGU7 62 aa4.16□□□□□ -1.74
USP48-212ENST00000527823 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
USP48-212ENST00000527823 ST20-AS1Q8NBB2 130 aa4.16□□□□□ -1.74
USP48-212ENST00000527823 TRAV9-1A0A075B6T8 112 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 C11orf86A6NJI1 115 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 MT1FP04733 61 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 SMIM13P0DJ93 91 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 NDUFV3P56181 108 aaKnown RBP4.15□□□□□ -1.75
USP48-212ENST00000527823 DSCR10P59022 87 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 Q6Q795 121 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 MIR7-3HGQ8N6C7 128 aa4.15□□□□□ -1.75
USP48-212ENST00000527823 CHTOPQ9Y3Y2 248 aaKnown RBP4.15□□□□□ -1.75
USP48-212ENST00000527823 A0A096LNJ9 63 aa4.14□□□□□ -1.75
USP48-212ENST00000527823 LINC01549A6NIU2 74 aa4.14□□□□□ -1.75
USP48-212ENST00000527823 DDTP30046 118 aa4.13□□□□□ -1.75
USP48-212ENST00000527823 RPS10P5Q9NQ39 176 aa4.13□□□□□ -1.75
USP48-212ENST00000527823 NDUFA6P56556 154 aa4.12□□□□□ -1.75
USP48-212ENST00000527823 PEA15Q15121 130 aa4.12□□□□□ -1.75
USP48-212ENST00000527823 TMEM170BQ5T4T1 132 aa4.12□□□□□ -1.75
USP48-212ENST00000527823 H7C2G1 150 aa4.11□□□□□ -1.75
USP48-212ENST00000527823 SPRR1BP22528 89 aa4.11□□□□□ -1.75
USP48-212ENST00000527823 S100A12P80511 92 aa4.11□□□□□ -1.75
USP48-212ENST00000527823 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
USP48-212ENST00000527823 MEIG1Q5JSS6 88 aa4.11□□□□□ -1.75
USP48-212ENST00000527823 C1orf195Q5TG92 126 aa4.11□□□□□ -1.75
USP48-212ENST00000527823 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
USP48-212ENST00000527823 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
USP48-212ENST00000527823 FA2HQ7L5A8 372 aa4.1□□□□□ -1.75
USP48-212ENST00000527823 TRAV23DV6A0A075B6W5 121 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 TRBV10-2A0A0K0K1G8 114 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 TMEM223A0PJW6 202 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 Q5XG85 94 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
USP48-212ENST00000527823 ATP6V1G1O75348 118 aa4.08□□□□□ -1.76
USP48-212ENST00000527823 MT-ND4LP03901 98 aa4.08□□□□□ -1.76
USP48-212ENST00000527823 CD164Q04900 197 aa4.08□□□□□ -1.76
USP48-212ENST00000527823 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
USP48-212ENST00000527823 SMCO4Q9NRQ5 59 aa4.08□□□□□ -1.76
USP48-212ENST00000527823 SPANXB1Q9NS25 103 aaPredicted RBP4.08□□□□□ -1.76
USP48-212ENST00000527823 ZNF73O43830 326 aaPredicted RBP4.07□□□□□ -1.76
USP48-212ENST00000527823 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
USP48-212ENST00000527823 BAGE3Q86Y29 109 aa4.07□□□□□ -1.76
USP48-212ENST00000527823 LOC107984156A0A0G2JMH3 177 aa4.06□□□□□ -1.76
USP48-212ENST00000527823 HBDP02042 147 aa4.06□□□□□ -1.76
USP48-212ENST00000527823 HERV-K104P63124 156 aa4.06□□□□□ -1.76
USP48-212ENST00000527823 ARL17AQ8IVW1 177 aa4.06□□□□□ -1.76
USP48-212ENST00000527823 A0A0G2JQZ4 141 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 TSPEAR-AS2P59090 65 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 Q1RN00 199 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 S100A7L2Q5SY68 101 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 SLC25A34Q6PIV7 304 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 LAMTOR3Q9UHA4 124 aa4.05□□□□□ -1.76
USP48-212ENST00000527823 C20orf202A1L168 122 aa4.04□□□□□ -1.76
USP48-212ENST00000527823 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
USP48-212ENST00000527823 PRO1933Q9H354 126 aa4.04□□□□□ -1.76
USP48-212ENST00000527823 NDUFC2O95298 119 aa4.03□□□□□ -1.76
USP48-212ENST00000527823 SOSTDC1Q6X4U4 206 aa4.03□□□□□ -1.76
USP48-212ENST00000527823 MAP1LC3CQ9BXW4 147 aa4.03□□□□□ -1.76
USP48-212ENST00000527823 ATP11AUNQ6ZP68 121 aa4.02□□□□□ -1.77
USP48-212ENST00000527823 C18orf32Q8TCD1 76 aa4.02□□□□□ -1.77
USP48-212ENST00000527823 LINC00846Q9NV44 126 aa4.02□□□□□ -1.77
USP48-212ENST00000527823 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
USP48-212ENST00000527823 LINC00587B1AMM8 73 aa4.01□□□□□ -1.77
USP48-212ENST00000527823 OBSCN-AS1Q96MR7 158 aa4.01□□□□□ -1.77
USP48-212ENST00000527823 MIEN1Q9BRT3 115 aa4.01□□□□□ -1.77
USP48-212ENST00000527823 NPC2P61916 151 aa4□□□□□ -1.77
USP48-212ENST00000527823 DHRS4-AS1Q9P1J3 65 aa4□□□□□ -1.77
USP48-212ENST00000527823 TRAV12-1A0A0B4J245 112 aa3.99□□□□□ -1.77
USP48-212ENST00000527823 LINC00614P0C842 121 aa3.99□□□□□ -1.77
USP48-212ENST00000527823 AKR1D1P51857 326 aa3.99□□□□□ -1.77
USP48-212ENST00000527823 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms