RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ENHOQ6UWT2 76 aa7.58□□□□□ -1.2
CAPN1-204ENST00000526468 LINC00308Q8TCZ7 52 aa7.58□□□□□ -1.2
CAPN1-204ENST00000526468 UBE2D4Q9Y2X8 147 aa7.58□□□□□ -1.2
CAPN1-204ENST00000526468 DGAT2L7PQ6IED9 249 aa7.57□□□□□ -1.2
CAPN1-204ENST00000526468 NDUFC2O95298 119 aa7.56□□□□□ -1.2
CAPN1-204ENST00000526468 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
CAPN1-204ENST00000526468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
CAPN1-204ENST00000526468 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
CAPN1-204ENST00000526468 JMJD7-PLA2G4BH0Y9G9 81 aa7.54□□□□□ -1.2
CAPN1-204ENST00000526468 BAALC-AS2P0C853 105 aa7.54□□□□□ -1.2
CAPN1-204ENST00000526468 CLEC2BQ92478 149 aa7.54□□□□□ -1.2
CAPN1-204ENST00000526468 hADV29S1A0JD25 119 aa7.53□□□□□ -1.2
CAPN1-204ENST00000526468 PANO1I0J062 215 aa7.53□□□□□ -1.2
CAPN1-204ENST00000526468 MALP21145 153 aa7.53□□□□□ -1.2
CAPN1-204ENST00000526468 LINC00269Q8N2A0 174 aa7.53□□□□□ -1.2
CAPN1-204ENST00000526468 C9orf163Q8N9P6 203 aa7.53□□□□□ -1.2
CAPN1-204ENST00000526468 IGLV10-54A0A075B6I4 117 aa7.52□□□□□ -1.21
CAPN1-204ENST00000526468 TNXBP22105 4242 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 GHRHP01286 108 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 OBSCN-AS1Q96MR7 158 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 PRR34Q9NV39 138 aa7.51□□□□□ -1.21
CAPN1-204ENST00000526468 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
CAPN1-204ENST00000526468 REG3AQ06141 175 aa7.5□□□□□ -1.21
CAPN1-204ENST00000526468 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
CAPN1-204ENST00000526468 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
CAPN1-204ENST00000526468 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
CAPN1-204ENST00000526468 ZNF625Q96I27 306 aaPredicted RBP7.49□□□□□ -1.21
CAPN1-204ENST00000526468 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
CAPN1-204ENST00000526468 CNBPP62633 177 aaKnown RBP7.48□□□□□ -1.21
CAPN1-204ENST00000526468 Q6ZRU5 148 aa7.48□□□□□ -1.21
CAPN1-204ENST00000526468 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
CAPN1-204ENST00000526468 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
CAPN1-204ENST00000526468 LRP2P98164 4655 aa7.48□□□□□ -1.21
CAPN1-204ENST00000526468 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
CAPN1-204ENST00000526468 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
CAPN1-204ENST00000526468 TMEM243Q9BU79 118 aa7.47□□□□□ -1.21
CAPN1-204ENST00000526468 NDUFC1O43677 76 aa7.46□□□□□ -1.22
CAPN1-204ENST00000526468 PDE6GP18545 87 aa7.46□□□□□ -1.22
CAPN1-204ENST00000526468 SPACA4Q8TDM5 124 aa7.46□□□□□ -1.22
CAPN1-204ENST00000526468 DPH3Q96FX2 82 aa7.46□□□□□ -1.22
CAPN1-204ENST00000526468 ORMDL1Q9P0S3 153 aa7.46□□□□□ -1.22
CAPN1-204ENST00000526468 A0A087WYN8 130 aa7.45□□□□□ -1.22
CAPN1-204ENST00000526468 UBE2L6O14933 153 aa7.45□□□□□ -1.22
CAPN1-204ENST00000526468 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
CAPN1-204ENST00000526468 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
CAPN1-204ENST00000526468 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
CAPN1-204ENST00000526468 C7orf33Q8WU49 177 aa7.45□□□□□ -1.22
CAPN1-204ENST00000526468 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
CAPN1-204ENST00000526468 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
CAPN1-204ENST00000526468 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
CAPN1-204ENST00000526468 NPC2P61916 151 aa7.44□□□□□ -1.22
CAPN1-204ENST00000526468 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
CAPN1-204ENST00000526468 SND1-IT1Q9HBX3 110 aa7.43□□□□□ -1.22
CAPN1-204ENST00000526468 TRAV13-1A0A0B4J241 112 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 IGKV2-24A0A0C4DH68 120 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 CCKP06307 115 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 LINC00167Q96N53 147 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 UBL5Q9BZL1 73 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 RNF213Q63HN8 5207 aa7.42□□□□□ -1.22
CAPN1-204ENST00000526468 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
CAPN1-204ENST00000526468 A0A1B0GUV1 79 aa7.41□□□□□ -1.22
CAPN1-204ENST00000526468 SLPIP03973 132 aa7.41□□□□□ -1.22
CAPN1-204ENST00000526468 PRR3P79522 188 aaKnown RBP7.41□□□□□ -1.22
CAPN1-204ENST00000526468 COX7B2Q8TF08 81 aa7.41□□□□□ -1.22
CAPN1-204ENST00000526468 PLAC8Q9NZF1 115 aa7.41□□□□□ -1.22
CAPN1-204ENST00000526468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
CAPN1-204ENST00000526468 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
CAPN1-204ENST00000526468 COX6A2Q02221 97 aa7.4□□□□□ -1.22
CAPN1-204ENST00000526468 CDC42SE2Q9NRR3 84 aa7.4□□□□□ -1.22
CAPN1-204ENST00000526468 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.22
CAPN1-204ENST00000526468 COX17Q14061 63 aa7.38□□□□□ -1.23
CAPN1-204ENST00000526468 TRAV7A0A075B6U4 112 aa7.37□□□□□ -1.23
CAPN1-204ENST00000526468 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
CAPN1-204ENST00000526468 FAM236DA0A1B0GTK5 79 aa7.37□□□□□ -1.23
CAPN1-204ENST00000526468 FAM236CP0DP71 79 aa7.37□□□□□ -1.23
CAPN1-204ENST00000526468 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
CAPN1-204ENST00000526468 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
CAPN1-204ENST00000526468 A0A096LNI7 61 aa7.36□□□□□ -1.23
CAPN1-204ENST00000526468 MIR7-3HGQ8N6C7 128 aa7.36□□□□□ -1.23
CAPN1-204ENST00000526468 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
CAPN1-204ENST00000526468 A0A087WZ39 114 aa7.35□□□□□ -1.23
CAPN1-204ENST00000526468 SMIM11BQ8TCY0 68 aa7.35□□□□□ -1.23
CAPN1-204ENST00000526468 PKIGQ9Y2B9 76 aa7.35□□□□□ -1.23
CAPN1-204ENST00000526468 C22orf24Q9Y442 160 aa7.35□□□□□ -1.23
CAPN1-204ENST00000526468 LINC00158P58513 81 aa7.34□□□□□ -1.23
CAPN1-204ENST00000526468 CXCL6P80162 114 aa7.34□□□□□ -1.23
CAPN1-204ENST00000526468 Q8IZM0 81 aa7.34□□□□□ -1.23
CAPN1-204ENST00000526468 FAM218AQ96MZ4 157 aa7.34□□□□□ -1.23
CAPN1-204ENST00000526468 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
CAPN1-204ENST00000526468 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
CAPN1-204ENST00000526468 ERC2-IT1O76042 136 aa7.33□□□□□ -1.24
CAPN1-204ENST00000526468 XCL1P47992 114 aa7.33□□□□□ -1.24
CAPN1-204ENST00000526468 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
CAPN1-204ENST00000526468 RNASE13Q5GAN3 156 aaKnown RBP7.33□□□□□ -1.24
CAPN1-204ENST00000526468 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms