RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SLC25A34Q6PIV7 304 aa10.95□□□□□ -0.66
VEGFA-222ENST00000520948 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
VEGFA-222ENST00000520948 HIGD1BQ9P298 99 aa10.95□□□□□ -0.66
VEGFA-222ENST00000520948 RPL28P46779 137 aaKnown RBP10.94□□□□□ -0.66
VEGFA-222ENST00000520948 S100A7L2Q5SY68 101 aa10.94□□□□□ -0.66
VEGFA-222ENST00000520948 LINC00337Q8N6G1 96 aa10.94□□□□□ -0.66
VEGFA-222ENST00000520948 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
VEGFA-222ENST00000520948 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
VEGFA-222ENST00000520948 UBE2AP49459 152 aa10.91□□□□□ -0.66
VEGFA-222ENST00000520948 LOC105371267A0A1B0GV96 52 aa10.9□□□□□ -0.66
VEGFA-222ENST00000520948 PRLHP81277 87 aa10.9□□□□□ -0.66
VEGFA-222ENST00000520948 S100A12P80511 92 aa10.89□□□□□ -0.67
VEGFA-222ENST00000520948 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
VEGFA-222ENST00000520948 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
VEGFA-222ENST00000520948 TRAV23DV6A0A075B6W5 121 aa10.88□□□□□ -0.67
VEGFA-222ENST00000520948 A4D1N5 150 aa10.88□□□□□ -0.67
VEGFA-222ENST00000520948 KRTAP1-4P0C5Y4 121 aa10.88□□□□□ -0.67
VEGFA-222ENST00000520948 KRTAP10-8P60410 259 aa10.88□□□□□ -0.67
VEGFA-222ENST00000520948 B5MCH6 92 aa10.87□□□□□ -0.67
VEGFA-222ENST00000520948 CBY1Q9Y3M2 126 aa10.87□□□□□ -0.67
VEGFA-222ENST00000520948 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
VEGFA-222ENST00000520948 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
VEGFA-222ENST00000520948 TAL2Q16559 108 aa10.85□□□□□ -0.67
VEGFA-222ENST00000520948 TRAV13-2A0A0B4J235 113 aa10.84□□□□□ -0.67
VEGFA-222ENST00000520948 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
VEGFA-222ENST00000520948 A6NDN8 102 aa10.82□□□□□ -0.68
VEGFA-222ENST00000520948 Q6ZRX8 168 aa10.82□□□□□ -0.68
VEGFA-222ENST00000520948 SMCR5Q8TEV8 140 aa10.82□□□□□ -0.68
VEGFA-222ENST00000520948 Q9BRP9 147 aa10.81□□□□□ -0.68
VEGFA-222ENST00000520948 HIGD2AQ9BW72 106 aa10.81□□□□□ -0.68
VEGFA-222ENST00000520948 UQCR10Q9UDW1 63 aa10.81□□□□□ -0.68
VEGFA-222ENST00000520948 CEND1Q8N111 149 aa10.8□□□□□ -0.68
VEGFA-222ENST00000520948 TRBV7-6A0A0J9YX20 115 aa10.78□□□□□ -0.68
VEGFA-222ENST00000520948 CFC1BP0CG36 223 aa10.78□□□□□ -0.68
VEGFA-222ENST00000520948 CFC1P0CG37 223 aa10.78□□□□□ -0.68
VEGFA-222ENST00000520948 C6orf99Q4VX62 202 aa10.78□□□□□ -0.68
VEGFA-222ENST00000520948 ERC2-IT1O76042 136 aa10.77□□□□□ -0.69
VEGFA-222ENST00000520948 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-222ENST00000520948 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
VEGFA-222ENST00000520948 SMIM11BQ8TCY0 68 aa10.77□□□□□ -0.69
VEGFA-222ENST00000520948 ELOF1P60002 83 aaKnown RBP10.76□□□□□ -0.69
VEGFA-222ENST00000520948 C12orf57Q99622 126 aa10.76□□□□□ -0.69
VEGFA-222ENST00000520948 HSD52Q0P140 79 aa10.75□□□□□ -0.69
VEGFA-222ENST00000520948 SPRR4Q96PI1 79 aa10.75□□□□□ -0.69
VEGFA-222ENST00000520948 PRO1933Q9H354 126 aa10.75□□□□□ -0.69
VEGFA-222ENST00000520948 COX7BP24311 80 aa10.74□□□□□ -0.69
VEGFA-222ENST00000520948 FXYD2P54710 66 aa10.74□□□□□ -0.69
VEGFA-222ENST00000520948 ANAPC11Q9NYG5 84 aa10.74□□□□□ -0.69
VEGFA-222ENST00000520948 LPAP08519 4548 aa10.74□□□□□ -0.69
VEGFA-222ENST00000520948 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
VEGFA-222ENST00000520948 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
VEGFA-222ENST00000520948 A0A087X002 238 aa10.72□□□□□ -0.69
VEGFA-222ENST00000520948 RPL13AP40429 203 aaKnown RBP10.72□□□□□ -0.69
VEGFA-222ENST00000520948 A0A1B0GWB2 263 aa10.71□□□□□ -0.69
VEGFA-222ENST00000520948 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.69
VEGFA-222ENST00000520948 ZNF706Q9Y5V0 76 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-222ENST00000520948 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
VEGFA-222ENST00000520948 A6NJY4 79 aa10.69□□□□□ -0.7
VEGFA-222ENST00000520948 CRYGAP11844 174 aa10.69□□□□□ -0.7
VEGFA-222ENST00000520948 KRTAP13-2Q52LG2 175 aa10.69□□□□□ -0.7
VEGFA-222ENST00000520948 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
VEGFA-222ENST00000520948 RAB37Q96AX2 223 aa10.68□□□□□ -0.7
VEGFA-222ENST00000520948 PRO1854Q9UHT4 67 aa10.66□□□□□ -0.7
VEGFA-222ENST00000520948 ST20-AS1Q8NBB2 130 aa10.65□□□□□ -0.7
VEGFA-222ENST00000520948 VAMP3Q15836 100 aa10.64□□□□□ -0.71
VEGFA-222ENST00000520948 BVES-AS1Q5T3Y7 98 aa10.64□□□□□ -0.71
VEGFA-222ENST00000520948 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
VEGFA-222ENST00000520948 NHP2Q9NX24 153 aaKnown RBP10.63□□□□□ -0.71
VEGFA-222ENST00000520948 H7C2G1 150 aa10.62□□□□□ -0.71
VEGFA-222ENST00000520948 SPRR1BP22528 89 aa10.62□□□□□ -0.71
VEGFA-222ENST00000520948 CTAG1AP78358 180 aa10.62□□□□□ -0.71
VEGFA-222ENST00000520948 LINC00575Q6W349 94 aa10.62□□□□□ -0.71
VEGFA-222ENST00000520948 TYMSOSQ8TAI1 123 aa10.62□□□□□ -0.71
VEGFA-222ENST00000520948 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
VEGFA-222ENST00000520948 TSTD3H0UI37 97 aa10.6□□□□□ -0.71
VEGFA-222ENST00000520948 K7ERJ3 54 aa10.58□□□□□ -0.72
VEGFA-222ENST00000520948 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-222ENST00000520948 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
VEGFA-222ENST00000520948 hADV29S1A0JD25 119 aa10.56□□□□□ -0.72
VEGFA-222ENST00000520948 H0YGX0 51 aa10.56□□□□□ -0.72
VEGFA-222ENST00000520948 SLC25A20O43772 301 aa10.55□□□□□ -0.72
VEGFA-222ENST00000520948 TEX49A0A1B0GTD5 131 aa10.54□□□□□ -0.72
VEGFA-222ENST00000520948 Q1RN00 199 aa10.54□□□□□ -0.72
VEGFA-222ENST00000520948 M0R143 59 aa10.53□□□□□ -0.72
VEGFA-222ENST00000520948 TRIAP1O43715 76 aa10.53□□□□□ -0.72
VEGFA-222ENST00000520948 TSPAN13O95857 204 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 PRR4Q16378 134 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 SSBP3-AS1Q7Z2R9 100 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 Q8N377 158 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 FAM218AQ96MZ4 157 aa10.52□□□□□ -0.73
VEGFA-222ENST00000520948 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
VEGFA-222ENST00000520948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-222ENST00000520948 Q6ZQY7 126 aa10.5□□□□□ -0.73
VEGFA-222ENST00000520948 LINC00304Q8N9R0 145 aa10.5□□□□□ -0.73
VEGFA-222ENST00000520948 A0A1B0GX51 115 aa10.48□□□□□ -0.73
VEGFA-222ENST00000520948 MOBPQ13875 183 aa10.48□□□□□ -0.73
VEGFA-222ENST00000520948 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
VEGFA-222ENST00000520948 Q8NBF4 154 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms