RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 GAGE2AQ6NT46 116 aa4.64□□□□□ -1.67
CTNNA1-203ENST00000517534 SSBP3-AS1Q7Z2R9 100 aa4.64□□□□□ -1.67
CTNNA1-203ENST00000517534 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
CTNNA1-203ENST00000517534 ETDCA0A1B0GVM5 59 aa4.63□□□□□ -1.67
CTNNA1-203ENST00000517534 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
CTNNA1-203ENST00000517534 LOC107984156A0A0G2JMH3 177 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 HERV-K104P63124 156 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 MOBPQ13875 183 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 MEIG1Q5JSS6 88 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 ARL17AQ8IVW1 177 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 Q9BRP9 147 aa4.62□□□□□ -1.67
CTNNA1-203ENST00000517534 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-203ENST00000517534 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
CTNNA1-203ENST00000517534 TRGC2P03986 189 aa4.61□□□□□ -1.67
CTNNA1-203ENST00000517534 IFI27L1Q96BM0 104 aa4.61□□□□□ -1.67
CTNNA1-203ENST00000517534 NDUFA12Q9UI09 145 aa4.61□□□□□ -1.67
CTNNA1-203ENST00000517534 LINC00587B1AMM8 73 aa4.6□□□□□ -1.67
CTNNA1-203ENST00000517534 SLC25A20O43772 301 aa4.6□□□□□ -1.67
CTNNA1-203ENST00000517534 TRBV10-2A0A0K0K1G8 114 aa4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 MYMXA0A1B0GTQ4 84 aa4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 DDTP30046 118 aa4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 TSPEAR-AS2P59090 65 aa4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 FAM19A2Q8N3H0 131 aa4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 CHCHD1Q96BP2 118 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-203ENST00000517534 IGLV6-57P01721 117 aa4.58□□□□□ -1.68
CTNNA1-203ENST00000517534 PCP4P48539 62 aa4.58□□□□□ -1.68
CTNNA1-203ENST00000517534 Q6ZRX8 168 aa4.58□□□□□ -1.68
CTNNA1-203ENST00000517534 MAP1LC3CQ9BXW4 147 aa4.58□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BKO60814 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BJP06899 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BOP23527 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BBP33778 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BDP58876 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BCP62807 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 S100A12P80511 92 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST2H2BEQ16778 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BHQ93079 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BNQ99877 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 HIST1H2BMQ99879 126 aa4.57□□□□□ -1.68
CTNNA1-203ENST00000517534 NDUFC2O95298 119 aa4.56□□□□□ -1.68
CTNNA1-203ENST00000517534 MT1HP80294 61 aa4.56□□□□□ -1.68
CTNNA1-203ENST00000517534 ST20-AS1Q8NBB2 130 aa4.56□□□□□ -1.68
CTNNA1-203ENST00000517534 SPANXB1Q9NS25 103 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-203ENST00000517534 LEPROTO15243 131 aa4.55□□□□□ -1.68
CTNNA1-203ENST00000517534 SOSTDC1Q6X4U4 206 aa4.55□□□□□ -1.68
CTNNA1-203ENST00000517534 TRAV23DV6A0A075B6W5 121 aa4.54□□□□□ -1.68
CTNNA1-203ENST00000517534 J3QQQ9 107 aa4.54□□□□□ -1.68
CTNNA1-203ENST00000517534 ZNF73O43830 326 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-203ENST00000517534 PCOTHQ58A44 107 aa4.54□□□□□ -1.68
CTNNA1-203ENST00000517534 C9orf153Q5TBE3 101 aa4.54□□□□□ -1.68
CTNNA1-203ENST00000517534 C5orf52A6NGY3 159 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 H0Y8G0 127 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 HSBP1O75506 76 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 S100A6P06703 90 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 SPRR1BP22528 89 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 JOSD1Q15040 202 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 S100A7L2Q5SY68 101 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 ADAMTSL4-AS1Q5T5F5 129 aa4.53□□□□□ -1.68
CTNNA1-203ENST00000517534 IGLV8-61A0A075B6I0 122 aa4.52□□□□□ -1.69
CTNNA1-203ENST00000517534 SERF1AO75920 110 aa4.52□□□□□ -1.69
CTNNA1-203ENST00000517534 NMUP48645 174 aa4.52□□□□□ -1.69
CTNNA1-203ENST00000517534 MIEN1Q9BRT3 115 aa4.52□□□□□ -1.69
CTNNA1-203ENST00000517534 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
CTNNA1-203ENST00000517534 LEPROTL1O95214 131 aa4.51□□□□□ -1.69
CTNNA1-203ENST00000517534 PLNP26678 52 aa4.51□□□□□ -1.69
CTNNA1-203ENST00000517534 COA6Q5JTJ3 125 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-203ENST00000517534 PMCHL2Q9BQD1 86 aa4.51□□□□□ -1.69
CTNNA1-203ENST00000517534 A0A0J9YXY3 114 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 C9orf92A6NGG3 77 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 DPM2O94777 84 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 CFC1BP0CG36 223 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 NPC2P61916 151 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 HRCT1Q6UXD1 115 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 HIST3H2BBQ8N257 126 aa4.5□□□□□ -1.69
CTNNA1-203ENST00000517534 LOC105371267A0A1B0GV96 52 aa4.49□□□□□ -1.69
CTNNA1-203ENST00000517534 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-203ENST00000517534 HERVK_113P61574 105 aa4.49□□□□□ -1.69
CTNNA1-203ENST00000517534 LIMD2Q9BT23 127 aa4.49□□□□□ -1.69
CTNNA1-203ENST00000517534 IGKCP01834 107 aa4.48□□□□□ -1.69
CTNNA1-203ENST00000517534 FABP4P15090 132 aa4.48□□□□□ -1.69
CTNNA1-203ENST00000517534 S100A2P29034 98 aa4.48□□□□□ -1.69
CTNNA1-203ENST00000517534 LITAFQ99732 161 aa4.48□□□□□ -1.69
CTNNA1-203ENST00000517534 HSPB8Q9UJY1 196 aa4.48□□□□□ -1.69
CTNNA1-203ENST00000517534 E9PLD3 99 aa4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 HINT1P49773 126 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 SLC25A34Q6PIV7 304 aa4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 LINC00308Q8TCZ7 52 aa4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 HIST1H2BLQ99880 126 aa4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 LAMTOR3Q9UHA4 124 aa4.47□□□□□ -1.69
CTNNA1-203ENST00000517534 USH2AO75445 5202 aa4.46□□□□□ -1.7
CTNNA1-203ENST00000517534 CD164Q04900 197 aa4.46□□□□□ -1.7
CTNNA1-203ENST00000517534 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
CTNNA1-203ENST00000517534 Q5XG85 94 aa4.46□□□□□ -1.7
CTNNA1-203ENST00000517534 SMIM29Q86T20 159 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms