RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 LINC00337Q8N6G1 96 aa4.38□□□□□ -1.71
SCARNA6-201ENST00000515982 TRAV23DV6A0A075B6W5 121 aa4.37□□□□□ -1.71
SCARNA6-201ENST00000515982 BCE1O60756 84 aa4.37□□□□□ -1.71
SCARNA6-201ENST00000515982 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
SCARNA6-201ENST00000515982 CFC1P0CG37 223 aa4.37□□□□□ -1.71
SCARNA6-201ENST00000515982 FXYD2P54710 66 aa4.37□□□□□ -1.71
SCARNA6-201ENST00000515982 BVES-AS1Q5T3Y7 98 aa4.37□□□□□ -1.71
SCARNA6-201ENST00000515982 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
SCARNA6-201ENST00000515982 SPRR1AP35321 89 aa4.36□□□□□ -1.71
SCARNA6-201ENST00000515982 VAMP3Q15836 100 aa4.36□□□□□ -1.71
SCARNA6-201ENST00000515982 Q5VSD8 79 aa4.36□□□□□ -1.71
SCARNA6-201ENST00000515982 KRTAP11-1Q8IUC1 163 aa4.36□□□□□ -1.71
SCARNA6-201ENST00000515982 PRO1854Q9UHT4 67 aa4.36□□□□□ -1.71
SCARNA6-201ENST00000515982 H0Y9J4 135 aa4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 IGLV7-43P04211 117 aa4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 INAFM2P0DMQ5 153 aa4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 RPL28P46779 137 aaKnown RBP4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 UBE2AP49459 152 aa4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 DIRC1Q969H9 104 aa4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 NHP2Q9NX24 153 aaKnown RBP4.35□□□□□ -1.71
SCARNA6-201ENST00000515982 TRBV7-6A0A0J9YX20 115 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 ZNF861PO60384 105 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 C6orf99Q4VX62 202 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 SPINK6Q6UWN8 80 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 FAM19A1Q7Z5A9 133 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 SMIM11BQ8TCY0 68 aa4.34□□□□□ -1.71
SCARNA6-201ENST00000515982 B5MCH6 92 aa4.33□□□□□ -1.72
SCARNA6-201ENST00000515982 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
SCARNA6-201ENST00000515982 H7C2G1 150 aa4.33□□□□□ -1.72
SCARNA6-201ENST00000515982 COX7BP24311 80 aa4.33□□□□□ -1.72
SCARNA6-201ENST00000515982 Q1RN00 199 aa4.33□□□□□ -1.72
SCARNA6-201ENST00000515982 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
SCARNA6-201ENST00000515982 H0YGX0 51 aa4.32□□□□□ -1.72
SCARNA6-201ENST00000515982 SNCGO76070 127 aa4.32□□□□□ -1.72
SCARNA6-201ENST00000515982 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
SCARNA6-201ENST00000515982 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 SLC25A20O43772 301 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 COX6CP09669 75 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 PSMB2P49721 201 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 ELOF1P60002 83 aaKnown RBP4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 PRLHP81277 87 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 BATFQ16520 125 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 Q6ZRX8 168 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 SMCR5Q8TEV8 140 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
SCARNA6-201ENST00000515982 K7ERJ3 54 aa4.3□□□□□ -1.72
SCARNA6-201ENST00000515982 HIGD2AQ9BW72 106 aa4.3□□□□□ -1.72
SCARNA6-201ENST00000515982 SCGB1C2P0DMR2 95 aa4.29□□□□□ -1.72
SCARNA6-201ENST00000515982 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
SCARNA6-201ENST00000515982 VPS13BQ7Z7G8 4022 aa4.29□□□□□ -1.72
SCARNA6-201ENST00000515982 FAT1Q14517 4588 aa4.28□□□□□ -1.72
SCARNA6-201ENST00000515982 hADV29S1A0JD25 119 aa4.28□□□□□ -1.72
SCARNA6-201ENST00000515982 TSPAN13O95857 204 aa4.28□□□□□ -1.72
SCARNA6-201ENST00000515982 LINC00575Q6W349 94 aa4.28□□□□□ -1.72
SCARNA6-201ENST00000515982 Q9BRP9 147 aa4.28□□□□□ -1.72
SCARNA6-201ENST00000515982 A0A1B0GX51 115 aa4.27□□□□□ -1.73
SCARNA6-201ENST00000515982 TRIAP1O43715 76 aa4.27□□□□□ -1.73
SCARNA6-201ENST00000515982 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
SCARNA6-201ENST00000515982 LYRM7Q5U5X0 104 aa4.27□□□□□ -1.73
SCARNA6-201ENST00000515982 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
SCARNA6-201ENST00000515982 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
SCARNA6-201ENST00000515982 GHRHP01286 108 aa4.26□□□□□ -1.73
SCARNA6-201ENST00000515982 C9orf118A6NHY6 69 aa4.25□□□□□ -1.73
SCARNA6-201ENST00000515982 J3QL48 77 aa4.25□□□□□ -1.73
SCARNA6-201ENST00000515982 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.25□□□□□ -1.73
SCARNA6-201ENST00000515982 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
SCARNA6-201ENST00000515982 TEX49A0A1B0GTD5 131 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 H3BQ85 93 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 TAX1BP3O14907 124 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 DNAL4O96015 105 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 OXTP01178 125 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 OCIAD2Q56VL3 154 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 GAGE2AQ6NT46 116 aa4.24□□□□□ -1.73
SCARNA6-201ENST00000515982 TRBV20-1A0A075B6N2 111 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 H3BUT2 72 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 CRYGAP11844 174 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 SPRR1BP22528 89 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 ST20-AS1Q8NBB2 130 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 DEFB105AQ8NG35 78 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 PPDPFLQ8WWR9 84 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
SCARNA6-201ENST00000515982 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 TRACP01848 142 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 FABP2P12104 132 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 ATXN8Q156A1 80 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 Q6ZQY7 126 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 NAA38Q9BRA0 125 aaKnown RBP4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
SCARNA6-201ENST00000515982 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
SCARNA6-201ENST00000515982 LST1O00453 97 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms