RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 DOPEY1Q5JWR5 2465 aa4.85□□□□□ -1.63
CPNE4-208ENST00000511604 IGHV4-61A0A0C4DH41 118 aa4.84□□□□□ -1.63
CPNE4-208ENST00000511604 KIAA0087Q14695 138 aa4.84□□□□□ -1.63
CPNE4-208ENST00000511604 MAP6D1Q9H9H5 199 aa4.84□□□□□ -1.63
CPNE4-208ENST00000511604 IGHV4-28A0A0C4DH34 117 aa4.84□□□□□ -1.64
CPNE4-208ENST00000511604 SERTAD4-AS1Q5TG53 156 aa4.84□□□□□ -1.64
CPNE4-208ENST00000511604 INSP01308 110 aa4.83□□□□□ -1.64
CPNE4-208ENST00000511604 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
CPNE4-208ENST00000511604 MP68P56378 58 aa4.83□□□□□ -1.64
CPNE4-208ENST00000511604 NBEAL2Q6ZNJ1 2754 aa4.82□□□□□ -1.64
CPNE4-208ENST00000511604 WFDC10AQ9H1F0 79 aa4.82□□□□□ -1.64
CPNE4-208ENST00000511604 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
CPNE4-208ENST00000511604 A0A096LPF7 62 aa4.82□□□□□ -1.64
CPNE4-208ENST00000511604 IGLV10-54A0A075B6I4 117 aa4.81□□□□□ -1.64
CPNE4-208ENST00000511604 K7EQZ3 153 aa4.81□□□□□ -1.64
CPNE4-208ENST00000511604 DSCR9P59020 149 aa4.81□□□□□ -1.64
CPNE4-208ENST00000511604 DSCR10P59022 87 aa4.81□□□□□ -1.64
CPNE4-208ENST00000511604 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
CPNE4-208ENST00000511604 FN1P02751 2386 aaKnown RBP4.81□□□□□ -1.64
CPNE4-208ENST00000511604 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 APCP25054 2843 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 FSHBP01225 129 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 SPINK7P58062 85 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 ODF3L2Q3SX64 289 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 FBXL19-AS1Q494R0 122 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 COA5Q86WW8 74 aa4.8□□□□□ -1.64
CPNE4-208ENST00000511604 DEFB112Q30KQ8 113 aa4.79□□□□□ -1.64
CPNE4-208ENST00000511604 PLAC8Q9NZF1 115 aa4.79□□□□□ -1.64
CPNE4-208ENST00000511604 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
CPNE4-208ENST00000511604 A0A1B0GW54 56 aa4.79□□□□□ -1.64
CPNE4-208ENST00000511604 SPAG11BQ08648 103 aa4.79□□□□□ -1.64
CPNE4-208ENST00000511604 ABCA12Q86UK0 2595 aa4.79□□□□□ -1.64
CPNE4-208ENST00000511604 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
CPNE4-208ENST00000511604 TLN2Q9Y4G6 2542 aa4.78□□□□□ -1.64
CPNE4-208ENST00000511604 ZNF469Q96JG9 3925 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-208ENST00000511604 B4DSR2 109 aa4.78□□□□□ -1.64
CPNE4-208ENST00000511604 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
CPNE4-208ENST00000511604 KPRPQ5T749 579 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-208ENST00000511604 NF1P21359 2839 aa4.78□□□□□ -1.64
CPNE4-208ENST00000511604 DNAJC9-AS1A6NH13 148 aa4.78□□□□□ -1.64
CPNE4-208ENST00000511604 GIG44P09565 113 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-208ENST00000511604 UNQ6190/PRO20217Q6UXQ8 127 aa4.78□□□□□ -1.64
CPNE4-208ENST00000511604 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 LINC00528Q8N1L1 170 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 MAPK1IP1LQ8NDC0 245 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 Q8NAQ8 132 aa4.77□□□□□ -1.65
CPNE4-208ENST00000511604 NOTCH2Q04721 2471 aa4.76□□□□□ -1.65
CPNE4-208ENST00000511604 HIVEP3Q5T1R4 2406 aa4.76□□□□□ -1.65
CPNE4-208ENST00000511604 XAGE1AQ9HD64 81 aa4.76□□□□□ -1.65
CPNE4-208ENST00000511604 UTP20O75691 2785 aaKnown RBP4.76□□□□□ -1.65
CPNE4-208ENST00000511604 USP9YO00507 2555 aaPredicted RBP4.76□□□□□ -1.65
CPNE4-208ENST00000511604 LRRK2Q5S007 2527 aa4.76□□□□□ -1.65
CPNE4-208ENST00000511604 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
CPNE4-208ENST00000511604 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
CPNE4-208ENST00000511604 SETD2Q9BYW2 2564 aaPredicted RBP4.76□□□□□ -1.65
CPNE4-208ENST00000511604 H3BPC8 53 aa4.75□□□□□ -1.65
CPNE4-208ENST00000511604 C9orf163Q8N9P6 203 aa4.75□□□□□ -1.65
CPNE4-208ENST00000511604 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
CPNE4-208ENST00000511604 H0Y9P7 68 aa4.75□□□□□ -1.65
CPNE4-208ENST00000511604 CNBPP62633 177 aaKnown RBP4.75□□□□□ -1.65
CPNE4-208ENST00000511604 CHCHD10Q8WYQ3 142 aaPredicted RBP4.75□□□□□ -1.65
CPNE4-208ENST00000511604 POLQO75417 2590 aa4.74□□□□□ -1.65
CPNE4-208ENST00000511604 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
CPNE4-208ENST00000511604 WFDC13Q8IUB5 93 aa4.74□□□□□ -1.65
CPNE4-208ENST00000511604 Q8NBF4 154 aa4.74□□□□□ -1.65
CPNE4-208ENST00000511604 ZNF702PQ9H963 129 aa4.74□□□□□ -1.65
CPNE4-208ENST00000511604 DEFB130BP0DP73 79 aa4.73□□□□□ -1.65
CPNE4-208ENST00000511604 DEFB130AP0DP74 79 aa4.73□□□□□ -1.65
CPNE4-208ENST00000511604 Q8N377 158 aa4.73□□□□□ -1.65
CPNE4-208ENST00000511604 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
CPNE4-208ENST00000511604 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
CPNE4-208ENST00000511604 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 C1orf137Q5JT78 98 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 LINC00476Q8WZB0 136 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 SPRR4Q96PI1 79 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 CSMD3Q7Z407 3707 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 WFDC10BQ8IUB3 73 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 RETNLBQ9BQ08 111 aa4.72□□□□□ -1.65
CPNE4-208ENST00000511604 GYPEP15421 78 aa4.71□□□□□ -1.66
CPNE4-208ENST00000511604 MSMBP08118 114 aa4.71□□□□□ -1.66
CPNE4-208ENST00000511604 CSNK1G2-AS1Q8NCQ2 148 aa4.71□□□□□ -1.66
CPNE4-208ENST00000511604 KRTAP17-1Q9BYP8 105 aa4.7□□□□□ -1.66
CPNE4-208ENST00000511604 OTOGQ6ZRI0 2925 aa4.7□□□□□ -1.66
CPNE4-208ENST00000511604 A0A0G2JQZ4 141 aa4.7□□□□□ -1.66
CPNE4-208ENST00000511604 A0A1W2PNN7 141 aa4.7□□□□□ -1.66
CPNE4-208ENST00000511604 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-208ENST00000511604 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
CPNE4-208ENST00000511604 RTL8CO15255 209 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 TNP2Q05952 138 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 C16orf74Q96GX8 76 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 A0A087X002 238 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 H0Y9J4 135 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 ANGP03950 147 aaKnown RBP4.69□□□□□ -1.66
CPNE4-208ENST00000511604 REG3AQ06141 175 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 C7orf33Q8WU49 177 aa4.69□□□□□ -1.66
CPNE4-208ENST00000511604 IGLV1-50A0A075B6I6 118 aa4.68□□□□□ -1.66
CPNE4-208ENST00000511604 C6orf48Q9UBA6 75 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms