RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 LINC00313P59037 77 aa5.71□□□□□ -1.49
HTT-208ENST00000510626 X6R8D5 127 aa5.71□□□□□ -1.5
HTT-208ENST00000510626 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
HTT-208ENST00000510626 C1orf134Q5TEV5 83 aa5.69□□□□□ -1.5
HTT-208ENST00000510626 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
HTT-208ENST00000510626 IGLV5-48A0A075B6I7 105 aa5.69□□□□□ -1.5
HTT-208ENST00000510626 KMT2BQ9UMN6 2715 aaPredicted RBP5.68□□□□□ -1.5
HTT-208ENST00000510626 CDSNQ15517 529 aa5.68□□□□□ -1.5
HTT-208ENST00000510626 OXLD1Q5BKU9 147 aa5.68□□□□□ -1.5
HTT-208ENST00000510626 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
HTT-208ENST00000510626 TEX15Q9BXT5 2789 aa5.68□□□□□ -1.5
HTT-208ENST00000510626 INAFM1C9JVW0 142 aa5.68□□□□□ -1.5
HTT-208ENST00000510626 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
HTT-208ENST00000510626 FAM104AQ969W3 186 aa5.67□□□□□ -1.5
HTT-208ENST00000510626 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
HTT-208ENST00000510626 EPM2AB3EWF7 344 aa5.67□□□□□ -1.5
HTT-208ENST00000510626 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
HTT-208ENST00000510626 TLX1NBP0CAT3 122 aa5.66□□□□□ -1.5
HTT-208ENST00000510626 Q9UF83 564 aa5.66□□□□□ -1.5
HTT-208ENST00000510626 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
HTT-208ENST00000510626 PRO3102Q9H379 93 aa5.66□□□□□ -1.5
HTT-208ENST00000510626 GCN1Q92616 2671 aaKnown RBP5.65□□□□□ -1.5
HTT-208ENST00000510626 MAP1AP78559 2803 aaPredicted RBP5.65□□□□□ -1.51
HTT-208ENST00000510626 DMAC1Q96GE9 116 aa5.65□□□□□ -1.51
HTT-208ENST00000510626 OCR1Q9BZK8 76 aa5.65□□□□□ -1.51
HTT-208ENST00000510626 PRR34Q9NV39 138 aa5.64□□□□□ -1.51
HTT-208ENST00000510626 PHF5AQ7RTV0 110 aaKnown RBP5.63□□□□□ -1.51
HTT-208ENST00000510626 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
HTT-208ENST00000510626 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
HTT-208ENST00000510626 K7EQZ3 153 aa5.62□□□□□ -1.51
HTT-208ENST00000510626 SPRR4Q96PI1 79 aa5.62□□□□□ -1.51
HTT-208ENST00000510626 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
HTT-208ENST00000510626 IGLV7-46A0A075B6I9 117 aa5.62□□□□□ -1.51
HTT-208ENST00000510626 ZNF292O60281 2723 aa5.62□□□□□ -1.51
HTT-208ENST00000510626 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
HTT-208ENST00000510626 TNP2Q05952 138 aa5.61□□□□□ -1.51
HTT-208ENST00000510626 ST20-AS1Q8NBB2 130 aa5.61□□□□□ -1.51
HTT-208ENST00000510626 M0R2N4 97 aa5.61□□□□□ -1.51
HTT-208ENST00000510626 LAMA2P24043 3122 aaKnown RBP5.6□□□□□ -1.51
HTT-208ENST00000510626 LY6G6CO95867 125 aa5.6□□□□□ -1.51
HTT-208ENST00000510626 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
HTT-208ENST00000510626 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
HTT-208ENST00000510626 IGLV1-50A0A075B6I6 118 aa5.6□□□□□ -1.51
HTT-208ENST00000510626 C8orf17Q9NRJ1 99 aa5.6□□□□□ -1.51
HTT-208ENST00000510626 IGFL1Q6UW32 110 aa5.59□□□□□ -1.51
HTT-208ENST00000510626 Q8NAQ8 132 aa5.58□□□□□ -1.52
HTT-208ENST00000510626 Q5XG85 94 aa5.57□□□□□ -1.52
HTT-208ENST00000510626 IGLV5-37A0A075B6J1 123 aa5.56□□□□□ -1.52
HTT-208ENST00000510626 CEP350Q5VT06 3117 aa5.56□□□□□ -1.52
HTT-208ENST00000510626 LINC00612Q8N6U2 182 aa5.56□□□□□ -1.52
HTT-208ENST00000510626 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
HTT-208ENST00000510626 CFAP54Q96N23 3096 aa5.55□□□□□ -1.52
HTT-208ENST00000510626 PLA2G2AP14555 144 aa5.55□□□□□ -1.52
HTT-208ENST00000510626 CSNK1G2-AS1Q8NCQ2 148 aa5.54□□□□□ -1.52
HTT-208ENST00000510626 Q8N377 158 aa5.54□□□□□ -1.52
HTT-208ENST00000510626 NBDYA0A0U1RRE5 68 aa5.53□□□□□ -1.52
HTT-208ENST00000510626 SPACA4Q8TDM5 124 aa5.53□□□□□ -1.52
HTT-208ENST00000510626 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
HTT-208ENST00000510626 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
HTT-208ENST00000510626 A0A1W2PPR1 153 aa5.52□□□□□ -1.53
HTT-208ENST00000510626 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
HTT-208ENST00000510626 CHTF8P0CG12 524 aa5.51□□□□□ -1.53
HTT-208ENST00000510626 SETXQ7Z333 2677 aaKnown RBP5.51□□□□□ -1.53
HTT-208ENST00000510626 NSD1Q96L73 2696 aaPredicted RBP5.51□□□□□ -1.53
HTT-208ENST00000510626 IGLV8-61A0A075B6I0 122 aa5.5□□□□□ -1.53
HTT-208ENST00000510626 Q96NJ1 140 aa5.49□□□□□ -1.53
HTT-208ENST00000510626 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
HTT-208ENST00000510626 TRANK1O15050 2925 aa5.49□□□□□ -1.53
HTT-208ENST00000510626 ZNF861PO60384 105 aa5.49□□□□□ -1.53
HTT-208ENST00000510626 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
HTT-208ENST00000510626 RTL8CO15255 209 aa5.49□□□□□ -1.53
HTT-208ENST00000510626 PCNTO95613 3336 aa5.48□□□□□ -1.53
HTT-208ENST00000510626 UTP20O75691 2785 aaKnown RBP5.48□□□□□ -1.53
HTT-208ENST00000510626 FRYLO94915 3013 aa5.46□□□□□ -1.54
HTT-208ENST00000510626 C9orf129Q5T035 196 aaKnown RBP5.45□□□□□ -1.54
HTT-208ENST00000510626 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
HTT-208ENST00000510626 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
HTT-208ENST00000510626 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
HTT-208ENST00000510626 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
HTT-208ENST00000510626 LINC00304Q8N9R0 145 aa5.44□□□□□ -1.54
HTT-208ENST00000510626 NBEAL2Q6ZNJ1 2754 aa5.44□□□□□ -1.54
HTT-208ENST00000510626 GOLGB1Q14789 3259 aaKnown RBP5.44□□□□□ -1.54
HTT-208ENST00000510626 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
HTT-208ENST00000510626 Q5VV11 94 aa5.43□□□□□ -1.54
HTT-208ENST00000510626 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
HTT-208ENST00000510626 APLNQ9ULZ1 77 aa5.42□□□□□ -1.54
HTT-208ENST00000510626 A0A1W2PNM2 257 aa5.42□□□□□ -1.54
HTT-208ENST00000510626 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.54
HTT-208ENST00000510626 LINC00483Q53H64 154 aa5.4□□□□□ -1.55
HTT-208ENST00000510626 APCP25054 2843 aa5.4□□□□□ -1.55
HTT-208ENST00000510626 A0A1B0GU33 70 aa5.39□□□□□ -1.55
HTT-208ENST00000510626 C9orf163Q8N9P6 203 aa5.39□□□□□ -1.55
HTT-208ENST00000510626 GIG44P09565 113 aaPredicted RBP5.38□□□□□ -1.55
HTT-208ENST00000510626 DSCR10P59022 87 aa5.38□□□□□ -1.55
HTT-208ENST00000510626 UBR5O95071 2799 aaPredicted RBP5.38□□□□□ -1.55
HTT-208ENST00000510626 H3BS24 57 aa5.38□□□□□ -1.55
HTT-208ENST00000510626 KRTAP10-9P60411 292 aa5.38□□□□□ -1.55
HTT-208ENST00000510626 FRYQ5TBA9 3013 aa5.37□□□□□ -1.55
HTT-208ENST00000510626 VPS13AQ96RL7 3174 aa5.37□□□□□ -1.55
HTT-208ENST00000510626 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms