RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 DEFB131AP59861 70 aa3.06□□□□□ -1.92
LINC01088-205ENST00000509088 PRB3Q04118 309 aaPredicted RBP3.06□□□□□ -1.92
LINC01088-205ENST00000509088 C1orf137Q5JT78 98 aa3.06□□□□□ -1.92
LINC01088-205ENST00000509088 COL6A3P12111 3177 aa3.06□□□□□ -1.92
LINC01088-205ENST00000509088 ZZEF1O43149 2961 aa3.06□□□□□ -1.92
LINC01088-205ENST00000509088 CR1P17927 2039 aa3.05□□□□□ -1.92
LINC01088-205ENST00000509088 IGLV1-51P01701 117 aa3.05□□□□□ -1.92
LINC01088-205ENST00000509088 DEFB132Q7Z7B7 95 aa3.05□□□□□ -1.92
LINC01088-205ENST00000509088 ZNF706Q9Y5V0 76 aaPredicted RBP3.05□□□□□ -1.92
LINC01088-205ENST00000509088 SDK1Q7Z5N4 2213 aa3.05□□□□□ -1.92
LINC01088-205ENST00000509088 A0A1W2PNM2 257 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 K7EQZ3 153 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 SPINK7P58062 85 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 C11orf71Q6IPW1 123 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 C7orf33Q8WU49 177 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 PCNX1Q96RV3 2341 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 CHD9Q3L8U1 2897 aa3.04□□□□□ -1.92
LINC01088-205ENST00000509088 CHD7Q9P2D1 2997 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 WNK1Q9H4A3 2382 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 PIEZO2Q9H5I5 2752 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 IGKV3OR2-268A0A0C4DH90 116 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 LYNX1G3V0Z9 82 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 PANO1I0J062 215 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 UQCR11O14957 56 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 LYNX1P0DP58 116 aa3.03□□□□□ -1.92
LINC01088-205ENST00000509088 CHCHD10Q8WYQ3 142 aaPredicted RBP3.03□□□□□ -1.92
LINC01088-205ENST00000509088 CACNA1HO95180 2353 aa3.02□□□□□ -1.93
LINC01088-205ENST00000509088 COL6A6A6NMZ7 2263 aa3.02□□□□□ -1.93
LINC01088-205ENST00000509088 PRRC2CQ9Y520 2896 aaKnown RBP3.02□□□□□ -1.93
LINC01088-205ENST00000509088 A8MWP4 228 aa3.02□□□□□ -1.93
LINC01088-205ENST00000509088 ACYP2P14621 99 aa3.02□□□□□ -1.93
LINC01088-205ENST00000509088 ROMO1P60602 79 aa3.02□□□□□ -1.93
LINC01088-205ENST00000509088 C1orf134Q5TEV5 83 aa3.02□□□□□ -1.93
LINC01088-205ENST00000509088 LAMA2P24043 3122 aaKnown RBP3.02□□□□□ -1.93
LINC01088-205ENST00000509088 CNOT1A5YKK6 2376 aaKnown RBP3.02□□□□□ -1.93
LINC01088-205ENST00000509088 UNC80Q8N2C7 3258 aa3.01□□□□□ -1.93
LINC01088-205ENST00000509088 PRB1P04280 392 aa3.01□□□□□ -1.93
LINC01088-205ENST00000509088 HTTP42858 3142 aa3.01□□□□□ -1.93
LINC01088-205ENST00000509088 KALRNO60229 2985 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 VPS13AQ96RL7 3174 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 CREBBPQ92793 2442 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 IGLV1-50A0A075B6I6 118 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 ZNF861PO60384 105 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 REG3AQ06141 175 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 UNQ6190/PRO20217Q6UXQ8 127 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 TMEM105Q8N8V8 129 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 Q8NDZ9 215 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 NOP10Q9NPE3 64 aaKnown RBP3□□□□□ -1.93
LINC01088-205ENST00000509088 PRO0255Q9UI72 69 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 AKAP6Q13023 2319 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 XIRP2A4UGR9 3374 aa3□□□□□ -1.93
LINC01088-205ENST00000509088 A0A087WSZ3 146 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 MSMBP08118 114 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 HRES1P13985 223 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 DEFB109BQ30KR1 87 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 Q6ZRX8 168 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 WFDC10BQ8IUB3 73 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
LINC01088-205ENST00000509088 DSPP15924 2871 aaKnown RBP2.98□□□□□ -1.93
LINC01088-205ENST00000509088 CACNA1AO00555 2505 aa2.98□□□□□ -1.93
LINC01088-205ENST00000509088 ANKHD1Q8IWZ3 2542 aaKnown RBP2.98□□□□□ -1.93
LINC01088-205ENST00000509088 A0A1B0GU69 56 aa2.98□□□□□ -1.93
LINC01088-205ENST00000509088 C5orf42Q9H799 3197 aa2.98□□□□□ -1.93
LINC01088-205ENST00000509088 DNAH14Q0VDD8 3507 aa2.97□□□□□ -1.93
LINC01088-205ENST00000509088 FRYLO94915 3013 aa2.97□□□□□ -1.93
LINC01088-205ENST00000509088 B4DSR2 109 aa2.97□□□□□ -1.93
LINC01088-205ENST00000509088 ANGP03950 147 aaKnown RBP2.97□□□□□ -1.93
LINC01088-205ENST00000509088 SPRR1AP35321 89 aa2.97□□□□□ -1.93
LINC01088-205ENST00000509088 C6orf48Q9UBA6 75 aa2.97□□□□□ -1.93
LINC01088-205ENST00000509088 TRIOO75962 3097 aa2.97□□□□□ -1.93
LINC01088-205ENST00000509088 EP300Q09472 2414 aaPredicted RBP2.97□□□□□ -1.93
LINC01088-205ENST00000509088 GPR179Q6PRD1 2367 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 DEFB105AQ8NG35 78 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 C4orf3Q8WVX3 66 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 DMAC1Q96GE9 116 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 C2CD3Q4AC94 2353 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 SZT2Q5T011 3432 aa2.96□□□□□ -1.94
LINC01088-205ENST00000509088 CFAP54Q96N23 3096 aa2.95□□□□□ -1.94
LINC01088-205ENST00000509088 CEP290O15078 2479 aa2.95□□□□□ -1.94
LINC01088-205ENST00000509088 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
LINC01088-205ENST00000509088 KRTAP4-16G5E9R7 235 aaPredicted RBP2.95□□□□□ -1.94
LINC01088-205ENST00000509088 TLX1NBP0CAT3 122 aa2.95□□□□□ -1.94
LINC01088-205ENST00000509088 LELP1Q5T871 98 aa2.95□□□□□ -1.94
LINC01088-205ENST00000509088 CAMK2N2Q96S95 79 aa2.95□□□□□ -1.94
LINC01088-205ENST00000509088 LAMA1P25391 3075 aa2.94□□□□□ -1.94
LINC01088-205ENST00000509088 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
LINC01088-205ENST00000509088 LY6EQ16553 131 aa2.94□□□□□ -1.94
LINC01088-205ENST00000509088 ADM2Q7Z4H4 148 aa2.94□□□□□ -1.94
LINC01088-205ENST00000509088 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
LINC01088-205ENST00000509088 TACC2O95359 2948 aa2.94□□□□□ -1.94
LINC01088-205ENST00000509088 IGLV10-54A0A075B6I4 117 aa2.93□□□□□ -1.94
LINC01088-205ENST00000509088 CASC10Q5T4H9 136 aa2.93□□□□□ -1.94
LINC01088-205ENST00000509088 AKAP13Q12802 2813 aa2.92□□□□□ -1.94
LINC01088-205ENST00000509088 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
LINC01088-205ENST00000509088 IGFL1Q6UW32 110 aa2.92□□□□□ -1.94
LINC01088-205ENST00000509088 CLPSL2Q6UWE3 100 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms