RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 MIR7-3HGQ8N6C7 128 aa3.23□□□□□ -1.89
GYPB-205ENST00000505583 Q9BRP9 147 aa3.23□□□□□ -1.89
GYPB-205ENST00000505583 ETDCA0A1B0GVM5 59 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 HERV-K104P63124 156 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 MT1HP80294 61 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 IFITM2Q01629 132 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 SFTA2Q6UW10 78 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 UQCC3Q6UW78 93 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 SEC11CQ9BY50 192 aa3.22□□□□□ -1.89
GYPB-205ENST00000505583 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
GYPB-205ENST00000505583 COX19Q49B96 90 aa3.21□□□□□ -1.9
GYPB-205ENST00000505583 RPS10P5Q9NQ39 176 aa3.21□□□□□ -1.9
GYPB-205ENST00000505583 TRAPPC1Q9Y5R8 145 aa3.21□□□□□ -1.9
GYPB-205ENST00000505583 SLC25A20O43772 301 aa3.2□□□□□ -1.9
GYPB-205ENST00000505583 TSPEAR-AS2P59090 65 aa3.2□□□□□ -1.9
GYPB-205ENST00000505583 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
GYPB-205ENST00000505583 MEIG1Q5JSS6 88 aa3.2□□□□□ -1.9
GYPB-205ENST00000505583 C10orf91Q5T1B1 145 aa3.2□□□□□ -1.9
GYPB-205ENST00000505583 SSBP3-AS1Q7Z2R9 100 aa3.2□□□□□ -1.9
GYPB-205ENST00000505583 TRAV12-1A0A0B4J245 112 aa3.19□□□□□ -1.9
GYPB-205ENST00000505583 Q6ZRX8 168 aa3.19□□□□□ -1.9
GYPB-205ENST00000505583 COMMD7Q86VX2 200 aa3.19□□□□□ -1.9
GYPB-205ENST00000505583 ST20-AS1Q8NBB2 130 aa3.19□□□□□ -1.9
GYPB-205ENST00000505583 IFI27L1Q96BM0 104 aa3.19□□□□□ -1.9
GYPB-205ENST00000505583 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
GYPB-205ENST00000505583 LOC107984156A0A0G2JMH3 177 aa3.18□□□□□ -1.9
GYPB-205ENST00000505583 DDTP30046 118 aa3.18□□□□□ -1.9
GYPB-205ENST00000505583 RHEBQ15382 184 aa3.18□□□□□ -1.9
GYPB-205ENST00000505583 PCOTHQ58A44 107 aa3.18□□□□□ -1.9
GYPB-205ENST00000505583 ARL17AQ8IVW1 177 aa3.18□□□□□ -1.9
GYPB-205ENST00000505583 FAM19A2Q8N3H0 131 aa3.18□□□□□ -1.9
GYPB-205ENST00000505583 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 C9orf92A6NGG3 77 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 IGLV6-57P01721 117 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
GYPB-205ENST00000505583 C9orf153Q5TBE3 101 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 SOSTDC1Q6X4U4 206 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
GYPB-205ENST00000505583 MYMXA0A1B0GTQ4 84 aa3.16□□□□□ -1.9
GYPB-205ENST00000505583 H0Y8G0 127 aa3.16□□□□□ -1.9
GYPB-205ENST00000505583 NPC2P61916 151 aa3.16□□□□□ -1.9
GYPB-205ENST00000505583 HRCT1Q6UXD1 115 aa3.16□□□□□ -1.9
GYPB-205ENST00000505583 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
GYPB-205ENST00000505583 TRAV23DV6A0A075B6W5 121 aa3.15□□□□□ -1.91
GYPB-205ENST00000505583 LINC00587B1AMM8 73 aa3.15□□□□□ -1.91
GYPB-205ENST00000505583 LEPROTO15243 131 aa3.15□□□□□ -1.91
GYPB-205ENST00000505583 ADAMTSL4-AS1Q5T5F5 129 aa3.15□□□□□ -1.91
GYPB-205ENST00000505583 PMCHL2Q9BQD1 86 aa3.15□□□□□ -1.91
GYPB-205ENST00000505583 MAP1LC3CQ9BXW4 147 aa3.15□□□□□ -1.91
GYPB-205ENST00000505583 SPANXB1Q9NS25 103 aaPredicted RBP3.15□□□□□ -1.91
GYPB-205ENST00000505583 J3QQQ9 107 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 ZNF73O43830 326 aaPredicted RBP3.14□□□□□ -1.91
GYPB-205ENST00000505583 HSBP1O75506 76 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 NDUFC2O95298 119 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 APOC3P02656 99 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 S100A12P80511 92 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 S100A7L2Q5SY68 101 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 LINC00518Q8N0U6 118 aa3.14□□□□□ -1.91
GYPB-205ENST00000505583 A0A0G2JQZ4 141 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 A0A0J9YXY3 114 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 H7C2G1 150 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 IGKV2-30P06310 120 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 CFC1BP0CG36 223 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 SPRR1BP22528 89 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 Q6ZVQ6 151 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 MIEN1Q9BRT3 115 aa3.13□□□□□ -1.91
GYPB-205ENST00000505583 SERF1AO75920 110 aa3.12□□□□□ -1.91
GYPB-205ENST00000505583 LEPROTL1O95214 131 aa3.12□□□□□ -1.91
GYPB-205ENST00000505583 JOSD1Q15040 202 aaPredicted RBP3.12□□□□□ -1.91
GYPB-205ENST00000505583 LITAFQ99732 161 aa3.12□□□□□ -1.91
GYPB-205ENST00000505583 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
GYPB-205ENST00000505583 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 DPM2O94777 84 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 SNAPINO95295 136 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 FABP4P15090 132 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 LGALS3P17931 250 aaKnown RBP3.11□□□□□ -1.91
GYPB-205ENST00000505583 PLNP26678 52 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 NMUP48645 174 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 Q1RN00 199 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 LIMD2Q9BT23 127 aa3.11□□□□□ -1.91
GYPB-205ENST00000505583 M0R2T5 61 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 IGKCP01834 107 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 TRGC2P03986 189 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 RPL37P61927 97 aaKnown RBP3.1□□□□□ -1.91
GYPB-205ENST00000505583 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 SMIM29Q86T20 159 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 SVBPQ8N300 66 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 DEFB105AQ8NG35 78 aa3.1□□□□□ -1.91
GYPB-205ENST00000505583 E9PLD3 99 aa3.09□□□□□ -1.91
GYPB-205ENST00000505583 HERVK_113P61574 105 aa3.09□□□□□ -1.91
GYPB-205ENST00000505583 C6orf99Q4VX62 202 aa3.09□□□□□ -1.91
GYPB-205ENST00000505583 OR13C6PQ8NH95 151 aa3.09□□□□□ -1.91
GYPB-205ENST00000505583 LINC00308Q8TCZ7 52 aa3.09□□□□□ -1.91
GYPB-205ENST00000505583 LAMTOR3Q9UHA4 124 aa3.09□□□□□ -1.91
GYPB-205ENST00000505583 HINT1P49773 126 aaPredicted RBP3.08□□□□□ -1.92
GYPB-205ENST00000505583 ELOF1P60002 83 aaKnown RBP3.08□□□□□ -1.92
GYPB-205ENST00000505583 CD164Q04900 197 aa3.08□□□□□ -1.92
GYPB-205ENST00000505583 TAL2Q16559 108 aa3.08□□□□□ -1.92
GYPB-205ENST00000505583 TTTY13Q9BZ97 58 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 268.9 ms