RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PRLHP81277 87 aa8.07□□□□□ -1.12
PDLIM7-212ENST00000504380 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
PDLIM7-212ENST00000504380 ZNF861PO60384 105 aa8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 SPRR1AP35321 89 aa8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 TAL2Q16559 108 aa8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 SPINK6Q6UWN8 80 aa8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 CEND1Q8N111 149 aa8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
PDLIM7-212ENST00000504380 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
PDLIM7-212ENST00000504380 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
PDLIM7-212ENST00000504380 FXYD2P54710 66 aa8.04□□□□□ -1.12
PDLIM7-212ENST00000504380 RPL28P46779 137 aaKnown RBP8.03□□□□□ -1.12
PDLIM7-212ENST00000504380 HSD52Q0P140 79 aa8.03□□□□□ -1.12
PDLIM7-212ENST00000504380 TRAV13-2A0A0B4J235 113 aa8.02□□□□□ -1.13
PDLIM7-212ENST00000504380 B5MCH6 92 aa8.02□□□□□ -1.13
PDLIM7-212ENST00000504380 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
PDLIM7-212ENST00000504380 CFC1BP0CG36 223 aa8.02□□□□□ -1.13
PDLIM7-212ENST00000504380 CFC1P0CG37 223 aa8.02□□□□□ -1.13
PDLIM7-212ENST00000504380 DIRC1Q969H9 104 aa8.02□□□□□ -1.13
PDLIM7-212ENST00000504380 H0Y9J4 135 aa8.01□□□□□ -1.13
PDLIM7-212ENST00000504380 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
PDLIM7-212ENST00000504380 SMIM11BQ8TCY0 68 aa8.01□□□□□ -1.13
PDLIM7-212ENST00000504380 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
PDLIM7-212ENST00000504380 H7C2G1 150 aa8□□□□□ -1.13
PDLIM7-212ENST00000504380 J3QL48 77 aa8□□□□□ -1.13
PDLIM7-212ENST00000504380 C6orf99Q4VX62 202 aa8□□□□□ -1.13
PDLIM7-212ENST00000504380 CTAG1AP78358 180 aa7.99□□□□□ -1.13
PDLIM7-212ENST00000504380 RAB37Q96AX2 223 aa7.99□□□□□ -1.13
PDLIM7-212ENST00000504380 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
PDLIM7-212ENST00000504380 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
PDLIM7-212ENST00000504380 A0A0B4J2C4 111 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 TSTD3H0UI37 97 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 ERC2-IT1O76042 136 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 BVES-AS1Q5T3Y7 98 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 Q6ZRX8 168 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 Q9BRP9 147 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 ANAPC11Q9NYG5 84 aa7.97□□□□□ -1.13
PDLIM7-212ENST00000504380 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.13
PDLIM7-212ENST00000504380 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
PDLIM7-212ENST00000504380 A6NJY4 79 aa7.96□□□□□ -1.14
PDLIM7-212ENST00000504380 K7ERJ3 54 aa7.96□□□□□ -1.14
PDLIM7-212ENST00000504380 COX7BP24311 80 aa7.96□□□□□ -1.14
PDLIM7-212ENST00000504380 HINT1P49773 126 aaPredicted RBP7.96□□□□□ -1.14
PDLIM7-212ENST00000504380 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
PDLIM7-212ENST00000504380 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
PDLIM7-212ENST00000504380 PRO1854Q9UHT4 67 aa7.94□□□□□ -1.14
PDLIM7-212ENST00000504380 LRP1Q07954 4544 aaKnown RBP7.92□□□□□ -1.14
PDLIM7-212ENST00000504380 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
PDLIM7-212ENST00000504380 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
PDLIM7-212ENST00000504380 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
PDLIM7-212ENST00000504380 LINC01600Q96MT4 127 aa7.92□□□□□ -1.14
PDLIM7-212ENST00000504380 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
PDLIM7-212ENST00000504380 A0A1B0GWB2 263 aa7.91□□□□□ -1.14
PDLIM7-212ENST00000504380 OXTP01178 125 aa7.91□□□□□ -1.14
PDLIM7-212ENST00000504380 Q1RN00 199 aa7.91□□□□□ -1.14
PDLIM7-212ENST00000504380 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
PDLIM7-212ENST00000504380 TRBV7-6A0A0J9YX20 115 aa7.9□□□□□ -1.14
PDLIM7-212ENST00000504380 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
PDLIM7-212ENST00000504380 VAMP3Q15836 100 aa7.89□□□□□ -1.15
PDLIM7-212ENST00000504380 A0A087X002 238 aa7.88□□□□□ -1.15
PDLIM7-212ENST00000504380 M0R143 59 aa7.88□□□□□ -1.15
PDLIM7-212ENST00000504380 BATFQ16520 125 aa7.88□□□□□ -1.15
PDLIM7-212ENST00000504380 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
PDLIM7-212ENST00000504380 DHRS4-AS1Q9P1J3 65 aa7.88□□□□□ -1.15
PDLIM7-212ENST00000504380 TSPAN13O95857 204 aa7.87□□□□□ -1.15
PDLIM7-212ENST00000504380 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
PDLIM7-212ENST00000504380 TRIAP1O43715 76 aa7.86□□□□□ -1.15
PDLIM7-212ENST00000504380 LINC00575Q6W349 94 aa7.86□□□□□ -1.15
PDLIM7-212ENST00000504380 DEFB105AQ8NG35 78 aa7.86□□□□□ -1.15
PDLIM7-212ENST00000504380 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
PDLIM7-212ENST00000504380 PSMB2P49721 201 aa7.85□□□□□ -1.15
PDLIM7-212ENST00000504380 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
PDLIM7-212ENST00000504380 CRYGAP11844 174 aa7.84□□□□□ -1.15
PDLIM7-212ENST00000504380 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
PDLIM7-212ENST00000504380 FAM218AQ96MZ4 157 aa7.84□□□□□ -1.15
PDLIM7-212ENST00000504380 NAA38Q9BRA0 125 aaKnown RBP7.84□□□□□ -1.15
PDLIM7-212ENST00000504380 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
PDLIM7-212ENST00000504380 PCP4L1A6NKN8 68 aa7.83□□□□□ -1.16
PDLIM7-212ENST00000504380 SLC25A20O43772 301 aa7.83□□□□□ -1.16
PDLIM7-212ENST00000504380 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
PDLIM7-212ENST00000504380 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
PDLIM7-212ENST00000504380 CLEC2BQ92478 149 aa7.82□□□□□ -1.16
PDLIM7-212ENST00000504380 TYMSOSQ8TAI1 123 aa7.81□□□□□ -1.16
PDLIM7-212ENST00000504380 IGLV9-49A0A0B4J1Y8 123 aa7.8□□□□□ -1.16
PDLIM7-212ENST00000504380 H0YGX0 51 aa7.8□□□□□ -1.16
PDLIM7-212ENST00000504380 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
PDLIM7-212ENST00000504380 Q6ZQY7 126 aa7.8□□□□□ -1.16
PDLIM7-212ENST00000504380 TNXBP22105 4242 aa7.78□□□□□ -1.16
PDLIM7-212ENST00000504380 SPRR1BP22528 89 aa7.78□□□□□ -1.16
PDLIM7-212ENST00000504380 Q8N377 158 aa7.78□□□□□ -1.16
PDLIM7-212ENST00000504380 SNHG12Q9BXW3 62 aa7.78□□□□□ -1.16
PDLIM7-212ENST00000504380 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
PDLIM7-212ENST00000504380 TEX49A0A1B0GTD5 131 aa7.77□□□□□ -1.17
PDLIM7-212ENST00000504380 SCGB1C2P0DMR2 95 aa7.77□□□□□ -1.17
PDLIM7-212ENST00000504380 COX6CP09669 75 aa7.76□□□□□ -1.17
PDLIM7-212ENST00000504380 MOBPQ13875 183 aa7.76□□□□□ -1.17
PDLIM7-212ENST00000504380 SMIM29Q86T20 159 aa7.76□□□□□ -1.17
PDLIM7-212ENST00000504380 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms