RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 HELZ2Q9BYK8 2649 aaKnown RBP7.68□□□□□ -1.18
AC055713.1-201ENST00000498967 COL4A4P53420 1690 aaPredicted RBP7.68□□□□□ -1.18
AC055713.1-201ENST00000498967 C10orf142B7Z368 130 aa7.68□□□□□ -1.18
AC055713.1-201ENST00000498967 LINC01546A6NGU7 62 aa7.67□□□□□ -1.18
AC055713.1-201ENST00000498967 IGLV5-48A0A075B6I7 105 aa7.66□□□□□ -1.18
AC055713.1-201ENST00000498967 K7EQZ3 153 aa7.66□□□□□ -1.18
AC055713.1-201ENST00000498967 A0A1B0GVX0 72 aa7.65□□□□□ -1.18
AC055713.1-201ENST00000498967 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.18
AC055713.1-201ENST00000498967 LINC00310P59036 64 aa7.65□□□□□ -1.19
AC055713.1-201ENST00000498967 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.19
AC055713.1-201ENST00000498967 LINC00304Q8N9R0 145 aa7.65□□□□□ -1.19
AC055713.1-201ENST00000498967 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
AC055713.1-201ENST00000498967 MUC22E2RYF6 1773 aaPredicted RBP7.64□□□□□ -1.19
AC055713.1-201ENST00000498967 ITPR3Q14573 2671 aa7.64□□□□□ -1.19
AC055713.1-201ENST00000498967 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
AC055713.1-201ENST00000498967 RTL8CO15255 209 aa7.64□□□□□ -1.19
AC055713.1-201ENST00000498967 A0A0D9SG42 100 aa7.63□□□□□ -1.19
AC055713.1-201ENST00000498967 LINC00588Q9Y4M8 146 aa7.63□□□□□ -1.19
AC055713.1-201ENST00000498967 UNC79Q9P2D8 2635 aa7.62□□□□□ -1.19
AC055713.1-201ENST00000498967 A0A096LNJ9 63 aa7.61□□□□□ -1.19
AC055713.1-201ENST00000498967 H3BS24 57 aa7.6□□□□□ -1.19
AC055713.1-201ENST00000498967 HRES1P13985 223 aa7.6□□□□□ -1.19
AC055713.1-201ENST00000498967 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
AC055713.1-201ENST00000498967 Q6ZSN1 163 aa7.59□□□□□ -1.19
AC055713.1-201ENST00000498967 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
AC055713.1-201ENST00000498967 PRO0461Q9UI25 63 aa7.59□□□□□ -1.19
AC055713.1-201ENST00000498967 NBDYA0A0U1RRE5 68 aa7.58□□□□□ -1.2
AC055713.1-201ENST00000498967 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
AC055713.1-201ENST00000498967 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
AC055713.1-201ENST00000498967 H7BZZ5 65 aa7.55□□□□□ -1.2
AC055713.1-201ENST00000498967 LINC00315P59091 139 aa7.55□□□□□ -1.2
AC055713.1-201ENST00000498967 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
AC055713.1-201ENST00000498967 KCNQ1DNQ9H478 68 aa7.54□□□□□ -1.2
AC055713.1-201ENST00000498967 A0A1B0GU33 70 aa7.53□□□□□ -1.2
AC055713.1-201ENST00000498967 ZNF575Q86XF7 245 aa7.53□□□□□ -1.2
AC055713.1-201ENST00000498967 ZNF861PO60384 105 aa7.53□□□□□ -1.2
AC055713.1-201ENST00000498967 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
AC055713.1-201ENST00000498967 COL6A5A8TX70 2615 aa7.53□□□□□ -1.2
AC055713.1-201ENST00000498967 DSCR10P59022 87 aa7.52□□□□□ -1.21
AC055713.1-201ENST00000498967 WIPF1O43516 503 aa7.5□□□□□ -1.21
AC055713.1-201ENST00000498967 TNP2Q05952 138 aa7.5□□□□□ -1.21
AC055713.1-201ENST00000498967 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
AC055713.1-201ENST00000498967 C15orf56Q8N910 161 aa7.49□□□□□ -1.21
AC055713.1-201ENST00000498967 NSD1Q96L73 2696 aaPredicted RBP7.47□□□□□ -1.21
AC055713.1-201ENST00000498967 CDSNQ15517 529 aa7.46□□□□□ -1.21
AC055713.1-201ENST00000498967 Q75L30 129 aa7.46□□□□□ -1.22
AC055713.1-201ENST00000498967 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
AC055713.1-201ENST00000498967 SMR3AQ99954 134 aa7.46□□□□□ -1.22
AC055713.1-201ENST00000498967 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
AC055713.1-201ENST00000498967 SPINK7P58062 85 aa7.46□□□□□ -1.22
AC055713.1-201ENST00000498967 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
AC055713.1-201ENST00000498967 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
AC055713.1-201ENST00000498967 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
AC055713.1-201ENST00000498967 IGLV1-50A0A075B6I6 118 aa7.44□□□□□ -1.22
AC055713.1-201ENST00000498967 PSORS1C2Q9UIG4 136 aa7.44□□□□□ -1.22
AC055713.1-201ENST00000498967 CHD6Q8TD26 2715 aa7.43□□□□□ -1.22
AC055713.1-201ENST00000498967 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
AC055713.1-201ENST00000498967 IGSF10Q6WRI0 2623 aa7.42□□□□□ -1.22
AC055713.1-201ENST00000498967 Q6ZSA8 131 aa7.42□□□□□ -1.22
AC055713.1-201ENST00000498967 M0R2T5 61 aa7.4□□□□□ -1.22
AC055713.1-201ENST00000498967 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.22
AC055713.1-201ENST00000498967 Q8N1X5 172 aa7.39□□□□□ -1.23
AC055713.1-201ENST00000498967 FLNAP21333 2647 aaKnown RBP7.39□□□□□ -1.23
AC055713.1-201ENST00000498967 A0A1W2PPR1 153 aa7.38□□□□□ -1.23
AC055713.1-201ENST00000498967 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
AC055713.1-201ENST00000498967 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
AC055713.1-201ENST00000498967 KRTAP10-9P60411 292 aa7.37□□□□□ -1.23
AC055713.1-201ENST00000498967 Q8N377 158 aa7.37□□□□□ -1.23
AC055713.1-201ENST00000498967 TEX15Q9BXT5 2789 aa7.36□□□□□ -1.23
AC055713.1-201ENST00000498967 SETXQ7Z333 2677 aaKnown RBP7.35□□□□□ -1.23
AC055713.1-201ENST00000498967 IGLV7-46A0A075B6I9 117 aa7.35□□□□□ -1.23
AC055713.1-201ENST00000498967 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
AC055713.1-201ENST00000498967 Q8NAQ8 132 aa7.34□□□□□ -1.23
AC055713.1-201ENST00000498967 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
AC055713.1-201ENST00000498967 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
AC055713.1-201ENST00000498967 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
AC055713.1-201ENST00000498967 R4GN34 69 aa7.33□□□□□ -1.24
AC055713.1-201ENST00000498967 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
AC055713.1-201ENST00000498967 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
AC055713.1-201ENST00000498967 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
AC055713.1-201ENST00000498967 CENPFP49454 3210 aa7.31□□□□□ -1.24
AC055713.1-201ENST00000498967 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
AC055713.1-201ENST00000498967 PRR34Q9NV39 138 aa7.3□□□□□ -1.24
AC055713.1-201ENST00000498967 LITAFQ99732 161 aa7.3□□□□□ -1.24
AC055713.1-201ENST00000498967 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
AC055713.1-201ENST00000498967 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
AC055713.1-201ENST00000498967 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
AC055713.1-201ENST00000498967 ITPR2Q14571 2701 aa7.27□□□□□ -1.25
AC055713.1-201ENST00000498967 ROMO1P60602 79 aa7.26□□□□□ -1.25
AC055713.1-201ENST00000498967 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
AC055713.1-201ENST00000498967 S4R3F8 94 aa7.26□□□□□ -1.25
AC055713.1-201ENST00000498967 RPL37P61927 97 aaKnown RBP7.23□□□□□ -1.25
AC055713.1-201ENST00000498967 KLK9Q2XQG4 91 aa7.22□□□□□ -1.25
AC055713.1-201ENST00000498967 A0A087WTM6 91 aa7.22□□□□□ -1.25
AC055713.1-201ENST00000498967 CNBPP62633 177 aaKnown RBP7.21□□□□□ -1.26
AC055713.1-201ENST00000498967 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
AC055713.1-201ENST00000498967 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
AC055713.1-201ENST00000498967 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
AC055713.1-201ENST00000498967 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
AC055713.1-201ENST00000498967 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms