RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 RPL23P62829 140 aaKnown RBP3.4□□□□□ -1.87
SPTA1-209ENST00000498708 REG3GQ6UW15 175 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 PGLYRP4Q96LB8 373 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 H3BT86 120 aa3.39□□□□□ -1.87
SPTA1-209ENST00000498708 IGKCP01834 107 aa3.39□□□□□ -1.87
SPTA1-209ENST00000498708 ACYP1P07311 99 aa3.39□□□□□ -1.87
SPTA1-209ENST00000498708 CEND1Q8N111 149 aa3.39□□□□□ -1.87
SPTA1-209ENST00000498708 C2orf48Q96LS8 159 aa3.39□□□□□ -1.87
SPTA1-209ENST00000498708 SMIM7Q9BQ49 75 aa3.39□□□□□ -1.87
SPTA1-209ENST00000498708 GVQW2A0A096LPI5 108 aaPredicted RBP3.38□□□□□ -1.87
SPTA1-209ENST00000498708 IGHV1-58A0A0C4DH39 117 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 LINC00959A0A1B0GUT2 108 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 F2Z2F3 143 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
SPTA1-209ENST00000498708 SYCNQ0VAF6 134 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 Q6ZRP5 223 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 LINC01561Q8N1V8 128 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 TSKUQ8WUA8 353 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 C11orf52Q96A22 123 aa3.38□□□□□ -1.87
SPTA1-209ENST00000498708 CHCHD1Q96BP2 118 aaKnown RBP3.38□□□□□ -1.87
SPTA1-209ENST00000498708 TRBV20OR9-2A0A075B6H5 130 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 A0A1W2PNN7 141 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 SDHAF1A6NFY7 115 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 SCGB1C2P0DMR2 95 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 SS18Q15532 418 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 PRR4Q16378 134 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 RNASE13Q5GAN3 156 aaKnown RBP3.37□□□□□ -1.87
SPTA1-209ENST00000498708 C1orf137Q5JT78 98 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 PHF5AQ7RTV0 110 aaKnown RBP3.37□□□□□ -1.87
SPTA1-209ENST00000498708 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
SPTA1-209ENST00000498708 RPP21Q9H633 154 aaKnown RBP3.37□□□□□ -1.87
SPTA1-209ENST00000498708 I3L3M4 83 aa3.36□□□□□ -1.87
SPTA1-209ENST00000498708 NDUFS5O43920 106 aa3.36□□□□□ -1.87
SPTA1-209ENST00000498708 CAMK2N2Q96S95 79 aa3.36□□□□□ -1.87
SPTA1-209ENST00000498708 OPRPNQ99935 248 aaPredicted RBP3.36□□□□□ -1.87
SPTA1-209ENST00000498708 LINC00474Q9P2X8 69 aa3.36□□□□□ -1.87
SPTA1-209ENST00000498708 PSORS1C2Q9UIG4 136 aa3.36□□□□□ -1.87
SPTA1-209ENST00000498708 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
SPTA1-209ENST00000498708 H7C423 109 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 TCL1BO95988 128 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 TSHBP01222 138 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 C9orf116Q5BN46 136 aaPredicted RBP3.35□□□□□ -1.87
SPTA1-209ENST00000498708 TMEM170BQ5T4T1 132 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 C5orf38Q86SI9 138 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 RBM12B-AS1Q9P1G2 102 aa3.35□□□□□ -1.87
SPTA1-209ENST00000498708 A0A1B0GXF2 115 aa3.34□□□□□ -1.87
SPTA1-209ENST00000498708 C8orf87E5RJ46 101 aa3.34□□□□□ -1.87
SPTA1-209ENST00000498708 DSCR8Q96T75 97 aa3.34□□□□□ -1.87
SPTA1-209ENST00000498708 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 A0A087WZ39 114 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 TRBV6-5A0A0K0K1A5 114 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 FAM168BA1KXE4 195 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 COX7A2LO14548 114 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 LGALS3P17931 250 aaKnown RBP3.33□□□□□ -1.88
SPTA1-209ENST00000498708 FCER1GP30273 86 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 LINC00643Q86TS7 51 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 KRTAP11-1Q8IUC1 163 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 PCP2Q8IVA1 136 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 CNFNQ9BYD5 112 aa3.33□□□□□ -1.88
SPTA1-209ENST00000498708 TRBV27A0A0K0K1C4 114 aa3.32□□□□□ -1.88
SPTA1-209ENST00000498708 BCE1O60756 84 aa3.32□□□□□ -1.88
SPTA1-209ENST00000498708 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
SPTA1-209ENST00000498708 IGLV7-43P04211 117 aa3.32□□□□□ -1.88
SPTA1-209ENST00000498708 POLR2KP53803 58 aaKnown RBP3.32□□□□□ -1.88
SPTA1-209ENST00000498708 ZC2HC1BQ5TFG8 222 aa3.32□□□□□ -1.88
SPTA1-209ENST00000498708 USH2AO75445 5202 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 hADV29S1A0JD25 119 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 UBE2D1P51668 147 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 FXYD2P54710 66 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 LINC01547P58512 204 aaPredicted RBP3.31□□□□□ -1.88
SPTA1-209ENST00000498708 UBE2BP63146 152 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 ATP5L2Q7Z4Y8 100 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 DIRC1Q969H9 104 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 UBE2D4Q9Y2X8 147 aa3.31□□□□□ -1.88
SPTA1-209ENST00000498708 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
SPTA1-209ENST00000498708 MYMXA0A1B0GTQ4 84 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 A0A1B0GUT8 65 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 HIGD1CA8MV81 97 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 H0Y9J4 135 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 NDUFC1O43677 76 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 NPYP01303 97 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 HBDP02042 147 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
SPTA1-209ENST00000498708 FAM104BQ5XKR9 115 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 UNQ6190/PRO20217Q6UXQ8 127 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 FP248Q71RG6 208 aaPredicted RBP3.3□□□□□ -1.88
SPTA1-209ENST00000498708 IFI27L1Q96BM0 104 aa3.3□□□□□ -1.88
SPTA1-209ENST00000498708 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
SPTA1-209ENST00000498708 NHP2Q9NX24 153 aaKnown RBP3.3□□□□□ -1.88
SPTA1-209ENST00000498708 NDUFA1O15239 70 aa3.29□□□□□ -1.88
SPTA1-209ENST00000498708 SLC25A20O43772 301 aa3.29□□□□□ -1.88
SPTA1-209ENST00000498708 ORMDL2Q53FV1 153 aa3.29□□□□□ -1.88
SPTA1-209ENST00000498708 Q6ZVQ6 151 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms