RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF625Q96I27 306 aaPredicted RBP0.96□□□□□ -2.26
CKS1BP2-201ENST00000497342 SMIM7Q9BQ49 75 aa0.96□□□□□ -2.26
CKS1BP2-201ENST00000497342 SPANXDQ9BXN6 97 aa0.96□□□□□ -2.26
CKS1BP2-201ENST00000497342 AGPAT4-IT1Q9H0P7 198 aa0.96□□□□□ -2.26
CKS1BP2-201ENST00000497342 IER3IP1Q9Y5U9 82 aa0.96□□□□□ -2.26
CKS1BP2-201ENST00000497342 C3orf85A0A1B0GTC6 90 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 J3QLW9 94 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 HMGN4O00479 90 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 EDF1O60869 148 aaKnown RBP0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 GYPBP06028 91 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 APELAP0DMC3 54 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 HIST1H1DP16402 221 aaKnown RBP0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 TEX261Q6UWH6 196 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 KRTAP13-1Q8IUC0 172 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 C5orf17Q8NAS9 161 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 SPTSSAQ969W0 71 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 ODF3Q96PU9 254 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 NAA38Q9BRA0 125 aaKnown RBP0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 PSMG3Q9BT73 122 aaPredicted RBP0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 RHPN1-AS1Q9BWJ2 59 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 RPRMQ9NS64 109 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 SCN3BQ9NY72 215 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 KLK9Q9UKQ9 250 aa0.95□□□□□ -2.26
CKS1BP2-201ENST00000497342 F8W1H4 67 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 CCL25O15444 150 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 MEIG1Q5JSS6 88 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 FAM74A1Q5RGS3 127 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 LCE3AQ5TA76 89 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 MIC13Q5XKP0 118 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 Q6AWC8 147 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 PP632Q6XCG6 107 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 IDO2Q6ZQW0 420 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 C14orf144Q96I85 54 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 NAA60Q9H7X0 242 aa0.94□□□□□ -2.26
CKS1BP2-201ENST00000497342 TRBV7-1A0A0A6YYK4 115 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 TMEM14DPA8MWL7 114 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 H3BRM9 83 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 NDUFA4O00483 81 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 GEMIN2O14893 280 aaKnown RBP0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 KRTAP5-8O75690 187 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 CD2P06729 351 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 ZNF25P17030 456 aaPredicted RBP0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 MRPS10P82664 201 aaKnown RBP0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 NEDD8Q15843 81 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 KLK9Q2XQG4 91 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 SNX29P2Q8IUI4 249 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 KCNRGQ8N5I3 272 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 TTC9CQ8N5M4 171 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 COPS9Q8WXC6 57 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 DMAC1Q96GE9 116 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 TCEAL7Q9BRU2 100 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 CDC42SE1Q9NRR8 79 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 MRPL35Q9NZE8 188 aaKnown RBP0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 TIMM8BQ9Y5J9 83 aaPredicted RBP0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 SERP1Q9Y6X1 66 aa0.93□□□□□ -2.26
CKS1BP2-201ENST00000497342 F6UZH7 168 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 JMJD7-PLA2G4BH0Y9G9 81 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 GNG4P50150 75 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 KRTAP12-4P60329 112 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 Q56UQ5 140 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 GDF5OSQ5U4N7 250 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 C12orf73Q69YU5 71 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 LSM10Q969L4 123 aaKnown RBP0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 C12orf57Q99622 126 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 NOP10Q9NPE3 64 aaKnown RBP0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 RABAC1Q9UI14 185 aa0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
CKS1BP2-201ENST00000497342 IGKV3D-7A0A0C4DH55 119 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 IGKV3OR2-268A0A0C4DH90 116 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 TRBV10-1A0A0K0K1A3 114 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 TMEM30CPA0ZSE6 113 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 BBIP1A8MTZ0 92 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 NDUFB6O95139 128 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 AKAIN1P0CW23 69 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 SMIM6P0DI80 62 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 PSMG4Q5JS54 123 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 SPANXN1Q5VSR9 72 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 KRTAP5-1Q6L8H4 278 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 CSAG1Q6PB30 78 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 PPP3R2Q96LZ3 170 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 NDUFA12Q9UI09 145 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 SNURFQ9Y675 71 aa0.91□□□□□ -2.26
CKS1BP2-201ENST00000497342 LOC107984156A0A0G2JMH3 177 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 MCRIP1C9JLW8 97 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 SPINK9Q5DT21 86 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 KRTAP8-1Q8IUC2 63 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 ARL17AQ8IVW1 177 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 TMEM141Q96I45 108 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 TMEM14CQ9P0S9 112 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 GNG8Q9UK08 70 aa0.9□□□□□ -2.27
CKS1BP2-201ENST00000497342 M0R129 80 aa0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 SAA2P0DJI9 122 aaPredicted RBP0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 SLC25A6P12236 298 aa0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 RPS27P42677 84 aaKnown RBP0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 RBP2P50120 134 aa0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 C9orf116Q5BN46 136 aaPredicted RBP0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 Q8N8P6 123 aa0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 PDCD10Q9BUL8 212 aa0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 SEC11CQ9BY50 192 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms