RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 PRR3P79522 188 aaKnown RBP4.15□□□□□ -1.75
TRA2B-216ENST00000493864 C9orf129Q5T035 196 aaKnown RBP4.15□□□□□ -1.75
TRA2B-216ENST00000493864 Q6ZVH6 145 aa4.15□□□□□ -1.75
TRA2B-216ENST00000493864 Q8NDZ9 215 aa4.15□□□□□ -1.75
TRA2B-216ENST00000493864 LOC107984156A0A0G2JMH3 177 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 A0A1W2PNN7 141 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 C16orf90A8MZG2 172 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 HSD52Q0P140 79 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 TAL2Q16559 108 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 LBHQ53QV2 105 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-216ENST00000493864 ARL17AQ8IVW1 177 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 CEND1Q8N111 149 aa4.14□□□□□ -1.75
TRA2B-216ENST00000493864 FAM168BA1KXE4 195 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 A4D1N5 150 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 HINT1P49773 126 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-216ENST00000493864 FXYD2P54710 66 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 BVES-AS1Q5T3Y7 98 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 KRTAP7-1Q8IUC3 87 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 DPH3Q96FX2 82 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
TRA2B-216ENST00000493864 PKIGQ9Y2B9 76 aa4.12□□□□□ -1.75
TRA2B-216ENST00000493864 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 PCLOQ9Y6V0 5065 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 IGKV2-28A0A075B6P5 120 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 IGKV2D-28P01615 120 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 FAM19A5Q7Z5A7 132 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-216ENST00000493864 SPACA4Q8TDM5 124 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 COPS9Q8WXC6 57 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 PPDPFQ9H3Y8 114 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 LINC00474Q9P2X8 69 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 FAT1Q14517 4588 aa4.11□□□□□ -1.75
TRA2B-216ENST00000493864 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
TRA2B-216ENST00000493864 NCR3O14931 201 aa4.1□□□□□ -1.75
TRA2B-216ENST00000493864 NDUFC2O95298 119 aa4.1□□□□□ -1.75
TRA2B-216ENST00000493864 XGP55808 180 aa4.1□□□□□ -1.75
TRA2B-216ENST00000493864 BATFQ16520 125 aa4.1□□□□□ -1.75
TRA2B-216ENST00000493864 C22orf24Q9Y442 160 aa4.1□□□□□ -1.75
TRA2B-216ENST00000493864 EPM2AB3EWF7 344 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 K7ERJ3 54 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 M0R143 59 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 M0R378 163 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 HAMPP81172 84 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 Q6ZSA8 131 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 PHF5AQ7RTV0 110 aaKnown RBP4.09□□□□□ -1.75
TRA2B-216ENST00000493864 LINC00337Q8N6G1 96 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 NKAPP1Q8N9T2 125 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 OR13C6PQ8NH95 151 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 LINC00167Q96N53 147 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 SNHG12Q9BXW3 62 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 NHP2Q9NX24 153 aaKnown RBP4.09□□□□□ -1.75
TRA2B-216ENST00000493864 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
TRA2B-216ENST00000493864 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
TRA2B-216ENST00000493864 TRBV10-2A0A0K0K1G8 114 aa4.08□□□□□ -1.76
TRA2B-216ENST00000493864 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
TRA2B-216ENST00000493864 A6NDN8 102 aa4.08□□□□□ -1.76
TRA2B-216ENST00000493864 CIRBP-AS1Q8TBR5 109 aa4.08□□□□□ -1.76
TRA2B-216ENST00000493864 TRAV13-2A0A0B4J235 113 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 TRBV10-3A0A0K0K1G6 114 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 RPL37AP8A6NKH3 93 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 H7C2G1 150 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 M0QXV9 152 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 IGLV6-57P01721 117 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 RPL13AP40429 203 aaKnown RBP4.07□□□□□ -1.76
TRA2B-216ENST00000493864 S100A7L2Q5SY68 101 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 SCXQ7RTU7 201 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 MRPL55Q7Z7F7 128 aaKnown RBP4.07□□□□□ -1.76
TRA2B-216ENST00000493864 KRTAP11-1Q8IUC1 163 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 RAB37Q96AX2 223 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 PRO1854Q9UHT4 67 aa4.07□□□□□ -1.76
TRA2B-216ENST00000493864 IGLV1-50A0A075B6I6 118 aa4.06□□□□□ -1.76
TRA2B-216ENST00000493864 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
TRA2B-216ENST00000493864 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
TRA2B-216ENST00000493864 SMIM11BQ8TCY0 68 aa4.05□□□□□ -1.76
TRA2B-216ENST00000493864 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
TRA2B-216ENST00000493864 TMEM126AQ9H061 195 aa4.05□□□□□ -1.76
TRA2B-216ENST00000493864 TAX1BP3O14907 124 aa4.04□□□□□ -1.76
TRA2B-216ENST00000493864 TSPAN13O95857 204 aa4.04□□□□□ -1.76
TRA2B-216ENST00000493864 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-216ENST00000493864 UBE2BP63146 152 aa4.04□□□□□ -1.76
TRA2B-216ENST00000493864 NAA38Q9BRA0 125 aaKnown RBP4.04□□□□□ -1.76
TRA2B-216ENST00000493864 KCNQ1DNQ9H478 68 aa4.04□□□□□ -1.76
TRA2B-216ENST00000493864 TRAV23DV6A0A075B6W5 121 aa4.03□□□□□ -1.76
TRA2B-216ENST00000493864 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
TRA2B-216ENST00000493864 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
TRA2B-216ENST00000493864 ZNF73O43830 326 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-216ENST00000493864 RPL28P46779 137 aaKnown RBP4.02□□□□□ -1.77
TRA2B-216ENST00000493864 Q1RN00 199 aa4.02□□□□□ -1.77
TRA2B-216ENST00000493864 REG3GQ6UW15 175 aa4.02□□□□□ -1.77
TRA2B-216ENST00000493864 PSORS1C2Q9UIG4 136 aa4.02□□□□□ -1.77
TRA2B-216ENST00000493864 FLG2Q5D862 2391 aaPredicted RBP4.01□□□□□ -1.77
TRA2B-216ENST00000493864 KRTAP4-16G5E9R7 235 aaPredicted RBP4.01□□□□□ -1.77
TRA2B-216ENST00000493864 SPRR1AP35321 89 aa4.01□□□□□ -1.77
TRA2B-216ENST00000493864 PSMB2P49721 201 aa4.01□□□□□ -1.77
TRA2B-216ENST00000493864 C6orf99Q4VX62 202 aa4.01□□□□□ -1.77
TRA2B-216ENST00000493864 CBY1Q9Y3M2 126 aa4.01□□□□□ -1.77
TRA2B-216ENST00000493864 ETDCA0A1B0GVM5 59 aa4□□□□□ -1.77
TRA2B-216ENST00000493864 H3BUT2 72 aa4□□□□□ -1.77
TRA2B-216ENST00000493864 SCGB1C2P0DMR2 95 aa4□□□□□ -1.77
TRA2B-216ENST00000493864 COX7BP24311 80 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms