RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SCO1O75880 301 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 IGKV2D-28P01615 120 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 MT1HL1P0DM35 61 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 VPREB1P12018 145 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 COA6Q5JTJ3 125 aaKnown RBP3.09□□□□□ -1.91
SF3A3-207ENST00000488934 PET117Q6UWS5 81 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 CBY1Q9Y3M2 126 aa3.09□□□□□ -1.91
SF3A3-207ENST00000488934 E9PLD3 99 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 M0R378 163 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 SMIM13P0DJ93 91 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 GAGE2AQ6NT46 116 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 KRTAP11-1Q8IUC1 163 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 BOD1L2Q8IYS8 172 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
SF3A3-207ENST00000488934 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 TRBV10-2A0A0K0K1G8 114 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 A0A0U1RRA0 63 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 NDUFC2O95298 119 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 KRTAP10-8P60410 259 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 KRTDAPP60985 99 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 LINC01545Q5VT33 79 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 FAM19A1Q7Z5A9 133 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 ARL17AQ8IVW1 177 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 PMCHL2Q9BQD1 86 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 TMEM126AQ9H061 195 aa3.07□□□□□ -1.92
SF3A3-207ENST00000488934 S100A6P06703 90 aa3.06□□□□□ -1.92
SF3A3-207ENST00000488934 CRYGAP11844 174 aa3.06□□□□□ -1.92
SF3A3-207ENST00000488934 S100A2P29034 98 aa3.06□□□□□ -1.92
SF3A3-207ENST00000488934 TSPEAR-AS2P59090 65 aa3.06□□□□□ -1.92
SF3A3-207ENST00000488934 SNRPEP62304 92 aaKnown RBP3.06□□□□□ -1.92
SF3A3-207ENST00000488934 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SF3A3-207ENST00000488934 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
SF3A3-207ENST00000488934 SPANXB1Q9NS25 103 aaPredicted RBP3.06□□□□□ -1.92
SF3A3-207ENST00000488934 ZNF706Q9Y5V0 76 aaPredicted RBP3.06□□□□□ -1.92
SF3A3-207ENST00000488934 ETDCA0A1B0GVM5 59 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 ZNF815PA8K554 130 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 NCR3O14931 201 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 TIMM17BO60830 172 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 C3orf79P0CE67 100 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 UBE2V1Q13404 147 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 FAM229BQ4G0N7 80 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 S100A7L2Q5SY68 101 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 KRTAP13-1Q8IUC0 172 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 LINC00337Q8N6G1 96 aa3.05□□□□□ -1.92
SF3A3-207ENST00000488934 LRP1Q07954 4544 aaKnown RBP3.05□□□□□ -1.92
SF3A3-207ENST00000488934 FAT3Q8TDW7 4589 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 A0A0J9YXY3 114 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 TMEM238C9JI98 176 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 DDTP30046 118 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 HINT1P49773 126 aaPredicted RBP3.04□□□□□ -1.92
SF3A3-207ENST00000488934 CTAG1AP78358 180 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 PRLHP81277 87 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 JOSD1Q15040 202 aaPredicted RBP3.04□□□□□ -1.92
SF3A3-207ENST00000488934 SCGB1D4Q6XE38 83 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 DAND5Q8N907 189 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 TYMSOSQ8TAI1 123 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 HIGD2AQ9BW72 106 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 KCNQ1DNQ9H478 68 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 SPANXCQ9NY87 97 aa3.04□□□□□ -1.92
SF3A3-207ENST00000488934 TRBV10-3A0A0K0K1G6 114 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 HSBP1L1C9JCN9 74 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 SPRR1AP35321 89 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 Q6ZVH6 145 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 LINC00518Q8N0U6 118 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 Q8NDZ9 215 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 PPDPFQ9H3Y8 114 aa3.03□□□□□ -1.92
SF3A3-207ENST00000488934 TNXBP22105 4242 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 SCGB1D1O95968 90 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 IGLV6-57P01721 117 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 IFITM1P13164 125 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 LINC00308Q8TCZ7 52 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 HIST1H2BLQ99880 126 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 SPANXDQ9BXN6 97 aa3.02□□□□□ -1.93
SF3A3-207ENST00000488934 A0A087X002 238 aa3.01□□□□□ -1.93
SF3A3-207ENST00000488934 C5orf52A6NGY3 159 aa3.01□□□□□ -1.93
SF3A3-207ENST00000488934 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
SF3A3-207ENST00000488934 ZNF73O43830 326 aaPredicted RBP3.01□□□□□ -1.93
SF3A3-207ENST00000488934 NPC2P61916 151 aa3.01□□□□□ -1.93
SF3A3-207ENST00000488934 ADAMTSL4-AS1Q5T5F5 129 aa3.01□□□□□ -1.93
SF3A3-207ENST00000488934 Q6ZRX8 168 aa3.01□□□□□ -1.93
SF3A3-207ENST00000488934 HIST3H2BBQ8N257 126 aa3.01□□□□□ -1.93
SF3A3-207ENST00000488934 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
SF3A3-207ENST00000488934 SPAG11AQ6PDA7 123 aa3□□□□□ -1.93
SF3A3-207ENST00000488934 ATOH7Q8N100 152 aa3□□□□□ -1.93
SF3A3-207ENST00000488934 LINC00304Q8N9R0 145 aa3□□□□□ -1.93
SF3A3-207ENST00000488934 OR13C6PQ8NH95 151 aa3□□□□□ -1.93
SF3A3-207ENST00000488934 SPRR4Q96PI1 79 aa3□□□□□ -1.93
SF3A3-207ENST00000488934 IGLV7-46A0A075B6I9 117 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 IGLV9-49A0A0B4J1Y8 123 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 SLC25A34Q6PIV7 304 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 SOSTDC1Q6X4U4 206 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 SMCR5Q8TEV8 140 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 TTTY13Q9BZ97 58 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 DHRS4-AS1Q9P1J3 65 aa2.99□□□□□ -1.93
SF3A3-207ENST00000488934 TRAV13-2A0A0B4J235 113 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms