RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 A0A1W2PRE2 83 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 LINC00862A6NCI5 91 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 A8MWP4 228 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 C1orf196B1AJZ1 125 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 NCR2O95944 276 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 S100A2P29034 98 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 Q8NDZ9 215 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 ZFP30Q9Y2G7 519 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 HSPB11Q9Y547 144 aa1.69□□□□□ -2.14
SMARCC1-207ENST00000485833 A0A087WXM4 84 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 ZNF727A8MUV8 499 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 M0R378 163 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 SPINK1P00995 79 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 RPL37P61927 97 aaKnown RBP1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 UBE2G1P62253 170 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 LYZL1Q6UWQ5 148 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 HIGD2AQ9BW72 106 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 TP73-AS1Q9UF72 201 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 TRAPPC1Q9Y5R8 145 aa1.68□□□□□ -2.14
SMARCC1-207ENST00000485833 TRBV24-1A0A075B6N3 115 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 TRBV30A0A0K0K1B3 111 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 FAM236DA0A1B0GTK5 79 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 C7orf77A4D0Y5 90 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 CCDC160A6NGH7 325 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 I3L3M4 83 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 PLA2G10O15496 165 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 PDE6DO43924 150 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 FAM236CP0DP71 79 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 ATP6V0CP27449 155 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 AKR1C3P42330 323 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 RPL39P62891 51 aaKnown RBP1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 FABP9Q0Z7S8 132 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 C10orf91Q5T1B1 145 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 SMIM15Q7Z3B0 74 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 HIST1H2BAQ96A08 127 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 TMEM126AQ9H061 195 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 TMEM167BQ9NRX6 74 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
SMARCC1-207ENST00000485833 A0A1B0GW54 56 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 A8MUN3 132 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 LST1O00453 97 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 SLC25A20O43772 301 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 IFNA1P01562 189 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 POLR2KP53803 58 aaKnown RBP1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 MRPL51Q4U2R6 128 aaKnown RBP1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 TRIQKQ629K1 86 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 BAGE2Q86Y30 109 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 MED9Q9NWA0 146 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 NDUFA12Q9UI09 145 aa1.66□□□□□ -2.14
SMARCC1-207ENST00000485833 TRBV6-5A0A0K0K1A5 114 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 H3BQ85 93 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 TRGC1P0CF51 173 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 HRES1P13985 223 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 FAM19A2Q8N3H0 131 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 PPP1R1CQ8WVI7 109 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 Q9H521 79 aa1.65□□□□□ -2.15
SMARCC1-207ENST00000485833 TRBV20OR9-2A0A075B6H5 130 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 TRBV27A0A0K0K1C4 114 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 A0A1B0GV72 72 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 LOC105371267A0A1B0GV96 52 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 A6NED7 52 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 NAP1L6A6NFF2 107 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 ERC2-IT1O76042 136 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 MPC2O95563 127 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 SPRR2EP22531 72 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 SPRR2BP35325 72 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 SPRR2AP35326 72 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 TSPEAR-AS2P59090 65 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 RPS20P60866 119 aaKnown RBP1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 RPS29P62273 56 aaKnown RBP1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 ANKRD29Q8N6D5 301 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 CNFNQ9BYD5 112 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 BIN3Q9NQY0 253 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 TOMM7Q9P0U1 55 aa1.64□□□□□ -2.15
SMARCC1-207ENST00000485833 CTXND1A0A1B0GTU2 59 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 MAP1LC3B2A6NCE7 125 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 LYRM1O43325 122 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 IL7P13232 177 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 RPL35P42766 123 aaKnown RBP1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 HRCT1Q6UXD1 115 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 C9orf62Q8N4C0 152 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 SMIM20Q8N5G0 67 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 OR13C6PQ8NH95 151 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 SMCR5Q8TEV8 140 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 PSMG3Q9BT73 122 aaPredicted RBP1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 CCDC32Q9BV29 185 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 MAP1LC3BQ9GZQ8 125 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 ST20Q9HBF5 79 aa1.63□□□□□ -2.15
SMARCC1-207ENST00000485833 A0A0B4J2C4 111 aa1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 F2Z2F3 143 aa1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 SRP19P09132 144 aaKnown RBP1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 Q5BKY6 102 aa1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 RPL7L1Q6DKI1 246 aaKnown RBP1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 C20orf166-AS1Q96NR2 134 aa1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 TIMM21Q9BVV7 248 aa1.62□□□□□ -2.15
SMARCC1-207ENST00000485833 TNFSF18Q9UNG2 199 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms