RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
HDAC6-221ENST00000477561 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
HDAC6-221ENST00000477561 NDUFC2O95298 119 aa5.13□□□□□ -1.59
HDAC6-221ENST00000477561 Q1RN00 199 aa5.12□□□□□ -1.59
HDAC6-221ENST00000477561 FAM19A5Q7Z5A7 132 aaPredicted RBP5.12□□□□□ -1.59
HDAC6-221ENST00000477561 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
HDAC6-221ENST00000477561 LYRM7Q5U5X0 104 aa5.11□□□□□ -1.59
HDAC6-221ENST00000477561 PSORS1C2Q9UIG4 136 aa5.11□□□□□ -1.59
HDAC6-221ENST00000477561 H3BUT2 72 aa5.1□□□□□ -1.59
HDAC6-221ENST00000477561 TSPAN13O95857 204 aa5.1□□□□□ -1.59
HDAC6-221ENST00000477561 RPL13AP40429 203 aaKnown RBP5.1□□□□□ -1.59
HDAC6-221ENST00000477561 C1orf137Q5JT78 98 aa5.1□□□□□ -1.59
HDAC6-221ENST00000477561 C9orf129Q5T035 196 aaKnown RBP5.1□□□□□ -1.59
HDAC6-221ENST00000477561 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
HDAC6-221ENST00000477561 KRTAP7-1Q8IUC3 87 aa5.1□□□□□ -1.59
HDAC6-221ENST00000477561 TNXBP22105 4242 aa5.1□□□□□ -1.59
HDAC6-221ENST00000477561 TRBV10-2A0A0K0K1G8 114 aa5.09□□□□□ -1.59
HDAC6-221ENST00000477561 A0A1B0GV90 55 aa5.09□□□□□ -1.59
HDAC6-221ENST00000477561 FABP2P12104 132 aa5.09□□□□□ -1.59
HDAC6-221ENST00000477561 PSMB2P49721 201 aa5.09□□□□□ -1.59
HDAC6-221ENST00000477561 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
HDAC6-221ENST00000477561 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
HDAC6-221ENST00000477561 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.6
HDAC6-221ENST00000477561 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 A0A1W2PPM0 123 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 H7C2G1 150 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 M0QXV9 152 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 COX6CP09669 75 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 VAMP3Q15836 100 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 OR13C6PQ8NH95 151 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 TMEM126AQ9H061 195 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 CBY1Q9Y3M2 126 aa5.08□□□□□ -1.6
HDAC6-221ENST00000477561 NCR3O14931 201 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 UBE2BP63146 152 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 GTF2H5Q6ZYL4 71 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 LINC01600Q96MT4 127 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 NAA38Q9BRA0 125 aaKnown RBP5.07□□□□□ -1.6
HDAC6-221ENST00000477561 PLA2G2DQ9UNK4 145 aa5.07□□□□□ -1.6
HDAC6-221ENST00000477561 M0R378 163 aa5.06□□□□□ -1.6
HDAC6-221ENST00000477561 VPREB1P12018 145 aa5.06□□□□□ -1.6
HDAC6-221ENST00000477561 REG3GQ6UW15 175 aa5.06□□□□□ -1.6
HDAC6-221ENST00000477561 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
HDAC6-221ENST00000477561 C22orf24Q9Y442 160 aa5.06□□□□□ -1.6
HDAC6-221ENST00000477561 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
HDAC6-221ENST00000477561 IGLV5-37A0A075B6J1 123 aa5.05□□□□□ -1.6
HDAC6-221ENST00000477561 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
HDAC6-221ENST00000477561 GAGE10A6NGK3 116 aa5.05□□□□□ -1.6
HDAC6-221ENST00000477561 K7EP34 96 aa5.05□□□□□ -1.6
HDAC6-221ENST00000477561 IGLV7-43P04211 117 aa5.05□□□□□ -1.6
HDAC6-221ENST00000477561 RPL28P46779 137 aaKnown RBP5.05□□□□□ -1.6
HDAC6-221ENST00000477561 TRIAP1O43715 76 aa5.04□□□□□ -1.6
HDAC6-221ENST00000477561 Q8NDZ9 215 aa5.04□□□□□ -1.6
HDAC6-221ENST00000477561 H0YGX0 51 aa5.03□□□□□ -1.6
HDAC6-221ENST00000477561 IGLV6-57P01721 117 aa5.03□□□□□ -1.6
HDAC6-221ENST00000477561 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
HDAC6-221ENST00000477561 UBE2V1Q13404 147 aa5.03□□□□□ -1.6
HDAC6-221ENST00000477561 ATXN8Q156A1 80 aa5.03□□□□□ -1.6
HDAC6-221ENST00000477561 SMIM11BQ8TCY0 68 aa5.03□□□□□ -1.6
HDAC6-221ENST00000477561 TRAV23DV6A0A075B6W5 121 aa5.02□□□□□ -1.61
HDAC6-221ENST00000477561 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
HDAC6-221ENST00000477561 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
HDAC6-221ENST00000477561 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
HDAC6-221ENST00000477561 H0Y9J4 135 aa5.01□□□□□ -1.61
HDAC6-221ENST00000477561 SNCGO76070 127 aa5.01□□□□□ -1.61
HDAC6-221ENST00000477561 MRPL55Q7Z7F7 128 aaKnown RBP5.01□□□□□ -1.61
HDAC6-221ENST00000477561 LINC00167Q96N53 147 aa5.01□□□□□ -1.61
HDAC6-221ENST00000477561 TCL1BO95988 128 aa5□□□□□ -1.61
HDAC6-221ENST00000477561 PRR26Q8N8Z3 221 aa5□□□□□ -1.61
HDAC6-221ENST00000477561 TRBV7-6A0A0J9YX20 115 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 H3BMG7 143 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 LST1O00453 97 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 PRYO14603 147 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
HDAC6-221ENST00000477561 C6orf99Q4VX62 202 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 KCNQ1DNQ9H478 68 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
HDAC6-221ENST00000477561 IGLV1-50A0A075B6I6 118 aa4.98□□□□□ -1.61
HDAC6-221ENST00000477561 A0A1B0GX51 115 aa4.98□□□□□ -1.61
HDAC6-221ENST00000477561 ZNF861PO60384 105 aa4.98□□□□□ -1.61
HDAC6-221ENST00000477561 TRACP01848 142 aa4.98□□□□□ -1.61
HDAC6-221ENST00000477561 CLEC2BQ92478 149 aa4.98□□□□□ -1.61
HDAC6-221ENST00000477561 F8W1H4 67 aa4.97□□□□□ -1.61
HDAC6-221ENST00000477561 SLC25A20O43772 301 aa4.97□□□□□ -1.61
HDAC6-221ENST00000477561 BCE1O60756 84 aa4.97□□□□□ -1.61
HDAC6-221ENST00000477561 DNAL4O96015 105 aa4.97□□□□□ -1.61
HDAC6-221ENST00000477561 KRTAP1-4P0C5Y4 121 aa4.97□□□□□ -1.61
HDAC6-221ENST00000477561 COX7BP24311 80 aa4.97□□□□□ -1.61
HDAC6-221ENST00000477561 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
HDAC6-221ENST00000477561 C9JAW5 83 aa4.95□□□□□ -1.62
HDAC6-221ENST00000477561 ELOF1P60002 83 aaKnown RBP4.95□□□□□ -1.62
HDAC6-221ENST00000477561 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
HDAC6-221ENST00000477561 FAM218AQ96MZ4 157 aa4.95□□□□□ -1.62
HDAC6-221ENST00000477561 hADV29S1A0JD25 119 aa4.94□□□□□ -1.62
HDAC6-221ENST00000477561 H3BT86 120 aa4.94□□□□□ -1.62
HDAC6-221ENST00000477561 SPRR1AP35321 89 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms