RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SCGB1D4Q6XE38 83 aa5.53□□□□□ -1.52
MCF2L-223ENST00000473345 Q6ZVH6 145 aa5.53□□□□□ -1.52
MCF2L-223ENST00000473345 PPDPFQ9H3Y8 114 aa5.53□□□□□ -1.52
MCF2L-223ENST00000473345 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
MCF2L-223ENST00000473345 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
MCF2L-223ENST00000473345 BCE1O60756 84 aa5.52□□□□□ -1.53
MCF2L-223ENST00000473345 CRYGAP11844 174 aa5.52□□□□□ -1.53
MCF2L-223ENST00000473345 RPL28P46779 137 aaKnown RBP5.52□□□□□ -1.53
MCF2L-223ENST00000473345 COX17Q14061 63 aa5.52□□□□□ -1.53
MCF2L-223ENST00000473345 LOC107984156A0A0G2JMH3 177 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 C21orf62-AS1Q17RA5 79 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 BVES-AS1Q5T3Y7 98 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 ARL17AQ8IVW1 177 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 CEND1Q8N111 149 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 LINC00167Q96N53 147 aa5.51□□□□□ -1.53
MCF2L-223ENST00000473345 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 LCE2BO14633 110 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 SMIM13P0DJ93 91 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 IFITM1P13164 125 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 MRPL55Q7Z7F7 128 aaKnown RBP5.5□□□□□ -1.53
MCF2L-223ENST00000473345 HIST1H4GQ99525 98 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 CDIP1Q9H305 208 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 ERG28Q9UKR5 140 aa5.5□□□□□ -1.53
MCF2L-223ENST00000473345 GAGE10A6NGK3 116 aa5.49□□□□□ -1.53
MCF2L-223ENST00000473345 M0R143 59 aa5.49□□□□□ -1.53
MCF2L-223ENST00000473345 C3orf22Q8N5N4 141 aa5.49□□□□□ -1.53
MCF2L-223ENST00000473345 LINC00304Q8N9R0 145 aa5.49□□□□□ -1.53
MCF2L-223ENST00000473345 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
MCF2L-223ENST00000473345 HINT1P49773 126 aaPredicted RBP5.48□□□□□ -1.53
MCF2L-223ENST00000473345 FXYD2P54710 66 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 MEIG1Q5JSS6 88 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 SOSTDC1Q6X4U4 206 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 LINC00308Q8TCZ7 52 aa5.48□□□□□ -1.53
MCF2L-223ENST00000473345 A0A1B0GWB2 263 aa5.47□□□□□ -1.53
MCF2L-223ENST00000473345 LINC00158P58513 81 aa5.47□□□□□ -1.53
MCF2L-223ENST00000473345 FAM229BQ4G0N7 80 aa5.47□□□□□ -1.53
MCF2L-223ENST00000473345 DAND5Q8N907 189 aa5.47□□□□□ -1.53
MCF2L-223ENST00000473345 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
MCF2L-223ENST00000473345 PFN2P35080 140 aa5.46□□□□□ -1.54
MCF2L-223ENST00000473345 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
MCF2L-223ENST00000473345 Q8NDZ9 215 aa5.46□□□□□ -1.54
MCF2L-223ENST00000473345 A0A0U1RRA0 63 aa5.45□□□□□ -1.54
MCF2L-223ENST00000473345 A4D1N5 150 aa5.45□□□□□ -1.54
MCF2L-223ENST00000473345 PRLHP81277 87 aa5.45□□□□□ -1.54
MCF2L-223ENST00000473345 RPL24P83731 157 aaKnown RBP5.45□□□□□ -1.54
MCF2L-223ENST00000473345 COPS9Q8WXC6 57 aa5.45□□□□□ -1.54
MCF2L-223ENST00000473345 A6NDN8 102 aa5.44□□□□□ -1.54
MCF2L-223ENST00000473345 NDUFC2O95298 119 aa5.44□□□□□ -1.54
MCF2L-223ENST00000473345 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
MCF2L-223ENST00000473345 CFC1P0CG37 223 aa5.44□□□□□ -1.54
MCF2L-223ENST00000473345 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
MCF2L-223ENST00000473345 SND1-IT1Q9HBX3 110 aa5.44□□□□□ -1.54
MCF2L-223ENST00000473345 A0A0B4J2C4 111 aa5.43□□□□□ -1.54
MCF2L-223ENST00000473345 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
MCF2L-223ENST00000473345 COL5A1-AS1Q5SY13 56 aa5.43□□□□□ -1.54
MCF2L-223ENST00000473345 NKAPP1Q8N9T2 125 aa5.43□□□□□ -1.54
MCF2L-223ENST00000473345 IGKV2-28A0A075B6P5 120 aa5.42□□□□□ -1.54
MCF2L-223ENST00000473345 IGKV2D-28P01615 120 aa5.42□□□□□ -1.54
MCF2L-223ENST00000473345 NPC2P61916 151 aa5.42□□□□□ -1.54
MCF2L-223ENST00000473345 BATFQ16520 125 aa5.42□□□□□ -1.54
MCF2L-223ENST00000473345 NHP2Q9NX24 153 aaKnown RBP5.42□□□□□ -1.54
MCF2L-223ENST00000473345 TAX1BP3O14907 124 aa5.41□□□□□ -1.54
MCF2L-223ENST00000473345 UBE2AP49459 152 aa5.41□□□□□ -1.54
MCF2L-223ENST00000473345 M0R378 163 aa5.4□□□□□ -1.54
MCF2L-223ENST00000473345 PRO1854Q9UHT4 67 aa5.4□□□□□ -1.54
MCF2L-223ENST00000473345 TRBV10-2A0A0K0K1G8 114 aa5.39□□□□□ -1.55
MCF2L-223ENST00000473345 K7ERJ3 54 aa5.39□□□□□ -1.55
MCF2L-223ENST00000473345 VPREB1P12018 145 aa5.39□□□□□ -1.55
MCF2L-223ENST00000473345 LINC01547P58512 204 aaPredicted RBP5.39□□□□□ -1.55
MCF2L-223ENST00000473345 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
MCF2L-223ENST00000473345 LINC00337Q8N6G1 96 aa5.39□□□□□ -1.55
MCF2L-223ENST00000473345 TRAV13-2A0A0B4J235 113 aa5.38□□□□□ -1.55
MCF2L-223ENST00000473345 TMEM126AQ9H061 195 aa5.38□□□□□ -1.55
MCF2L-223ENST00000473345 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
MCF2L-223ENST00000473345 MT1HP80294 61 aa5.37□□□□□ -1.55
MCF2L-223ENST00000473345 FAM19A1Q7Z5A9 133 aa5.37□□□□□ -1.55
MCF2L-223ENST00000473345 RAB37Q96AX2 223 aa5.37□□□□□ -1.55
MCF2L-223ENST00000473345 FP248Q71RG6 208 aaPredicted RBP5.36□□□□□ -1.55
MCF2L-223ENST00000473345 SPRR4Q96PI1 79 aa5.36□□□□□ -1.55
MCF2L-223ENST00000473345 ZNF706Q9Y5V0 76 aaPredicted RBP5.36□□□□□ -1.55
MCF2L-223ENST00000473345 IGLV6-57P01721 117 aa5.35□□□□□ -1.55
MCF2L-223ENST00000473345 Q8NBF4 154 aa5.34□□□□□ -1.55
MCF2L-223ENST00000473345 A0A1W2PPM0 123 aa5.33□□□□□ -1.56
MCF2L-223ENST00000473345 H3BUT2 72 aa5.33□□□□□ -1.56
MCF2L-223ENST00000473345 NCR3O14931 201 aa5.33□□□□□ -1.56
MCF2L-223ENST00000473345 HIGD2AQ9BW72 106 aa5.33□□□□□ -1.56
MCF2L-223ENST00000473345 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
MCF2L-223ENST00000473345 SMIM11BQ8TCY0 68 aa5.32□□□□□ -1.56
MCF2L-223ENST00000473345 NAA38Q9BRA0 125 aaKnown RBP5.32□□□□□ -1.56
MCF2L-223ENST00000473345 TRBV10-3A0A0K0K1G6 114 aa5.31□□□□□ -1.56
MCF2L-223ENST00000473345 A0A1B0GV90 55 aa5.31□□□□□ -1.56
MCF2L-223ENST00000473345 TRIAP1O43715 76 aa5.31□□□□□ -1.56
MCF2L-223ENST00000473345 XP32Q5T750 250 aa5.31□□□□□ -1.56
MCF2L-223ENST00000473345 OR13C6PQ8NH95 151 aa5.31□□□□□ -1.56
MCF2L-223ENST00000473345 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms