RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 NDUFC2O95298 119 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 ZC2HC1BQ5TFG8 222 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 LINC01545Q5VT33 79 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 Q5XG85 94 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 TOMM6Q96B49 74 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 MRPL35Q9NZE8 188 aaKnown RBP3.6□□□□□ -1.83
VARS-222ENST00000470953 TRBV30A0A0K0K1B3 111 aa3.59□□□□□ -1.83
VARS-222ENST00000470953 FAM240AA0A1B0GVK7 77 aa3.59□□□□□ -1.83
VARS-222ENST00000470953 UBE2BP63146 152 aa3.59□□□□□ -1.83
VARS-222ENST00000470953 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
VARS-222ENST00000470953 Q6ZRP5 223 aa3.59□□□□□ -1.83
VARS-222ENST00000470953 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
VARS-222ENST00000470953 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 IGIPA6NJ69 53 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 HBDP02042 147 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 CXCL5P42830 114 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
VARS-222ENST00000470953 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
VARS-222ENST00000470953 C9orf116Q5BN46 136 aaPredicted RBP3.58□□□□□ -1.84
VARS-222ENST00000470953 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 REG3GQ6UW15 175 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 HRCT1Q6UXD1 115 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 UNQ6190/PRO20217Q6UXQ8 127 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 LINC00173Q6ZV60 143 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 LINC01561Q8N1V8 128 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 ANKRD29Q8N6D5 301 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 AMELXQ99217 191 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 C6orf48Q9UBA6 75 aa3.58□□□□□ -1.84
VARS-222ENST00000470953 J3QQQ9 107 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 COX7CP15954 63 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 Q8IZM0 81 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 COPS9Q8WXC6 57 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
VARS-222ENST00000470953 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 F8VRH5 84 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 TRACP01848 142 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 TLX1NBP0CAT3 122 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 PFN2P35080 140 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 PHF5AQ7RTV0 110 aaKnown RBP3.56□□□□□ -1.84
VARS-222ENST00000470953 COX7B2Q8TF08 81 aa3.56□□□□□ -1.84
VARS-222ENST00000470953 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 SMIM1B2RUZ4 78 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 SCGB1C2P0DMR2 95 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
VARS-222ENST00000470953 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 TMEM170BQ5T4T1 132 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 CEND1Q8N111 149 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 XAGE1AQ9HD64 81 aa3.55□□□□□ -1.84
VARS-222ENST00000470953 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 LINC01546A6NGU7 62 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 ATOX1O00244 68 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 ACYP1P07311 99 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 MT1HP80294 61 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 LCE2CQ5TA81 110 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 FAM19A3Q7Z5A8 133 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 FAM19A2Q8N3H0 131 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 PRR26Q8N8Z3 221 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 NKAPP1Q8N9T2 125 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 PSORS1C2Q9UIG4 136 aa3.54□□□□□ -1.84
VARS-222ENST00000470953 IGLV5-45A0A087WSX0 123 aa3.53□□□□□ -1.84
VARS-222ENST00000470953 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
VARS-222ENST00000470953 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
VARS-222ENST00000470953 SMCPP49901 116 aaPredicted RBP3.53□□□□□ -1.84
VARS-222ENST00000470953 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
VARS-222ENST00000470953 DIRC1Q969H9 104 aa3.53□□□□□ -1.84
VARS-222ENST00000470953 ZNF22P17026 224 aaPredicted RBP3.52□□□□□ -1.85
VARS-222ENST00000470953 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
VARS-222ENST00000470953 SFTA2Q6UW10 78 aa3.52□□□□□ -1.85
VARS-222ENST00000470953 IFI27L1Q96BM0 104 aa3.52□□□□□ -1.85
VARS-222ENST00000470953 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
VARS-222ENST00000470953 A0A096LNJ9 63 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 C11orf86A6NJI1 115 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 IGKCP01834 107 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 IGLV7-43P04211 117 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 VPREB1P12018 145 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 FXYD2P54710 66 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 MRPL55Q7Z7F7 128 aaKnown RBP3.51□□□□□ -1.85
VARS-222ENST00000470953 ZNF625Q96I27 306 aaPredicted RBP3.51□□□□□ -1.85
VARS-222ENST00000470953 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
VARS-222ENST00000470953 NHP2Q9NX24 153 aaKnown RBP3.51□□□□□ -1.85
VARS-222ENST00000470953 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
VARS-222ENST00000470953 UBE2AP49459 152 aa3.5□□□□□ -1.85
VARS-222ENST00000470953 HERVK_113P61574 105 aa3.5□□□□□ -1.85
VARS-222ENST00000470953 URB1-AS1Q96HZ7 61 aa3.5□□□□□ -1.85
VARS-222ENST00000470953 TP73-AS1Q9UF72 201 aa3.5□□□□□ -1.85
VARS-222ENST00000470953 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
VARS-222ENST00000470953 TRAV12-1A0A0B4J245 112 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms