RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 IGLV4-60A0A075B6I1 120 aa5.67□□□□□ -1.5
SYNGAP1-205ENST00000470232 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
SYNGAP1-205ENST00000470232 LINC00158P58513 81 aa5.67□□□□□ -1.5
SYNGAP1-205ENST00000470232 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
SYNGAP1-205ENST00000470232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.67□□□□□ -1.5
SYNGAP1-205ENST00000470232 LPAP08519 4548 aa5.67□□□□□ -1.5
SYNGAP1-205ENST00000470232 USP17L23D6RBM5 183 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 TRACP01848 142 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 GAGE2BQ13066 116 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 GAGE2EQ4V326 116 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 REG3GQ6UW15 175 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 SDIM1Q6ZPB5 146 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 GAGE2DQ9UEU5 116 aa5.66□□□□□ -1.5
SYNGAP1-205ENST00000470232 C5orf38Q86SI9 138 aa5.65□□□□□ -1.5
SYNGAP1-205ENST00000470232 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
SYNGAP1-205ENST00000470232 A0A087WZ39 114 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 LINC00959A0A1B0GUT2 108 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 FAM240AA0A1B0GVK7 77 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 SS18Q15532 418 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 Q6Q795 121 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 SND1-IT1Q9HBX3 110 aa5.64□□□□□ -1.51
SYNGAP1-205ENST00000470232 MUC2Q02817 5179 aa5.63□□□□□ -1.51
SYNGAP1-205ENST00000470232 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
SYNGAP1-205ENST00000470232 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
SYNGAP1-205ENST00000470232 PANO1I0J062 215 aa5.63□□□□□ -1.51
SYNGAP1-205ENST00000470232 BAALC-AS2P0C853 105 aa5.63□□□□□ -1.51
SYNGAP1-205ENST00000470232 RPL28P46779 137 aaKnown RBP5.63□□□□□ -1.51
SYNGAP1-205ENST00000470232 A0A087WYN8 130 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 ACYP1P07311 99 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 PFN2P35080 140 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 C6orf226Q5I0X4 101 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 ENHOQ6UWT2 76 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
SYNGAP1-205ENST00000470232 IGKV2-28A0A075B6P5 120 aa5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 IGKV2D-28P01615 120 aa5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 ANGP03950 147 aaKnown RBP5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 NDUFV3P56181 108 aaKnown RBP5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 PLAC8Q9NZF1 115 aa5.61□□□□□ -1.51
SYNGAP1-205ENST00000470232 A0A1B0GUV1 79 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 H0YGX0 51 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 DNAL4O96015 105 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 MALP21145 153 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 XCL1P47992 114 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 CNBPP62633 177 aaKnown RBP5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 CFAP161Q6P656 301 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 CLPSL2Q6UWE3 100 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 OR13C6PQ8NH95 151 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
SYNGAP1-205ENST00000470232 Q8IZM0 81 aa5.59□□□□□ -1.51
SYNGAP1-205ENST00000470232 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
SYNGAP1-205ENST00000470232 PRR3P79522 188 aaKnown RBP5.58□□□□□ -1.52
SYNGAP1-205ENST00000470232 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
SYNGAP1-205ENST00000470232 CXCL5P42830 114 aa5.57□□□□□ -1.52
SYNGAP1-205ENST00000470232 GAGE2AQ6NT46 116 aa5.57□□□□□ -1.52
SYNGAP1-205ENST00000470232 CHCHD10Q8WYQ3 142 aaPredicted RBP5.57□□□□□ -1.52
SYNGAP1-205ENST00000470232 CHTF8P0CG12 524 aa5.56□□□□□ -1.52
SYNGAP1-205ENST00000470232 CD164L2Q6UWJ8 174 aa5.56□□□□□ -1.52
SYNGAP1-205ENST00000470232 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
SYNGAP1-205ENST00000470232 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
SYNGAP1-205ENST00000470232 C22orf24Q9Y442 160 aa5.56□□□□□ -1.52
SYNGAP1-205ENST00000470232 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
SYNGAP1-205ENST00000470232 IGLV10-54A0A075B6I4 117 aa5.54□□□□□ -1.52
SYNGAP1-205ENST00000470232 REG3AQ06141 175 aa5.54□□□□□ -1.52
SYNGAP1-205ENST00000470232 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
SYNGAP1-205ENST00000470232 Q6ZRP5 223 aa5.54□□□□□ -1.52
SYNGAP1-205ENST00000470232 SMCR5Q8TEV8 140 aa5.54□□□□□ -1.52
SYNGAP1-205ENST00000470232 IMUPQ9GZP8 106 aa5.54□□□□□ -1.52
SYNGAP1-205ENST00000470232 CCDC179H3BU77 68 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 NDUFC2O95298 119 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
SYNGAP1-205ENST00000470232 IGKV2-24A0A0C4DH68 120 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 A0A1B0GX51 115 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 B5MCH6 92 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 NCR3O14931 201 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 SLPIP03973 132 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 SPAG11BQ08648 103 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 COX17Q14061 63 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 PSORS1C2Q9UIG4 136 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 PKIGQ9Y2B9 76 aa5.52□□□□□ -1.53
SYNGAP1-205ENST00000470232 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
SYNGAP1-205ENST00000470232 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
SYNGAP1-205ENST00000470232 LINC00167Q96N53 147 aa5.51□□□□□ -1.53
SYNGAP1-205ENST00000470232 SS18L2Q9UHA2 77 aa5.51□□□□□ -1.53
SYNGAP1-205ENST00000470232 Q6JHZ5 121 aa5.5□□□□□ -1.53
SYNGAP1-205ENST00000470232 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
SYNGAP1-205ENST00000470232 TMEM126AQ9H061 195 aa5.5□□□□□ -1.53
SYNGAP1-205ENST00000470232 C9orf116Q5BN46 136 aaPredicted RBP5.49□□□□□ -1.53
SYNGAP1-205ENST00000470232 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
SYNGAP1-205ENST00000470232 H3BS24 57 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 585 ms