RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SOSTDC1Q6X4U4 206 aa12.61□□□□□ -0.39
LIME1-203ENST00000465591 LITAFQ99732 161 aa12.61□□□□□ -0.39
LIME1-203ENST00000465591 SMCR5Q8TEV8 140 aa12.6□□□□□ -0.39
LIME1-203ENST00000465591 RETNLBQ9BQ08 111 aa12.6□□□□□ -0.39
LIME1-203ENST00000465591 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
LIME1-203ENST00000465591 TRBV10-2A0A0K0K1G8 114 aa12.59□□□□□ -0.39
LIME1-203ENST00000465591 ETDCA0A1B0GVM5 59 aa12.59□□□□□ -0.39
LIME1-203ENST00000465591 DDTP30046 118 aa12.58□□□□□ -0.4
LIME1-203ENST00000465591 NPC2P61916 151 aa12.58□□□□□ -0.4
LIME1-203ENST00000465591 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
LIME1-203ENST00000465591 COPS9Q8WXC6 57 aa12.58□□□□□ -0.4
LIME1-203ENST00000465591 NDUFC2O95298 119 aa12.57□□□□□ -0.4
LIME1-203ENST00000465591 Q6ZVH6 145 aa12.57□□□□□ -0.4
LIME1-203ENST00000465591 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
LIME1-203ENST00000465591 SPANXB1Q9NS25 103 aaPredicted RBP12.57□□□□□ -0.4
LIME1-203ENST00000465591 SPANXCQ9NY87 97 aa12.57□□□□□ -0.4
LIME1-203ENST00000465591 PAM16Q9Y3D7 125 aa12.57□□□□□ -0.4
LIME1-203ENST00000465591 B5MCH6 92 aa12.56□□□□□ -0.4
LIME1-203ENST00000465591 SPATA45Q537H7 98 aa12.56□□□□□ -0.4
LIME1-203ENST00000465591 COX8AP10176 69 aa12.55□□□□□ -0.4
LIME1-203ENST00000465591 PYY3Q5JQD4 70 aa12.55□□□□□ -0.4
LIME1-203ENST00000465591 PPDPFQ9H3Y8 114 aa12.55□□□□□ -0.4
LIME1-203ENST00000465591 ZNF706Q9Y5V0 76 aaPredicted RBP12.55□□□□□ -0.4
LIME1-203ENST00000465591 ERC2-IT1O76042 136 aa12.54□□□□□ -0.4
LIME1-203ENST00000465591 IGLV6-57P01721 117 aa12.54□□□□□ -0.4
LIME1-203ENST00000465591 IFITM1P13164 125 aa12.54□□□□□ -0.4
LIME1-203ENST00000465591 DLEU1O43261 78 aa12.52□□□□□ -0.41
LIME1-203ENST00000465591 S100A12P80511 92 aa12.52□□□□□ -0.41
LIME1-203ENST00000465591 Q9BRP9 147 aa12.52□□□□□ -0.41
LIME1-203ENST00000465591 LINC00483Q53H64 154 aa12.5□□□□□ -0.41
LIME1-203ENST00000465591 S100A7L2Q5SY68 101 aa12.5□□□□□ -0.41
LIME1-203ENST00000465591 C14orf144Q96I85 54 aa12.5□□□□□ -0.41
LIME1-203ENST00000465591 Q6ZRX8 168 aa12.49□□□□□ -0.41
LIME1-203ENST00000465591 GAGE2AQ6NT46 116 aa12.48□□□□□ -0.41
LIME1-203ENST00000465591 LINC00518Q8N0U6 118 aa12.48□□□□□ -0.41
LIME1-203ENST00000465591 TRAV23DV6A0A075B6W5 121 aa12.47□□□□□ -0.41
LIME1-203ENST00000465591 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
LIME1-203ENST00000465591 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
LIME1-203ENST00000465591 Q8NBF4 154 aa12.47□□□□□ -0.41
LIME1-203ENST00000465591 CTAG1AP78358 180 aa12.46□□□□□ -0.41
LIME1-203ENST00000465591 MUC2Q02817 5179 aa12.46□□□□□ -0.42
LIME1-203ENST00000465591 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
LIME1-203ENST00000465591 SPAG11AQ6PDA7 123 aa12.44□□□□□ -0.42
LIME1-203ENST00000465591 ZNF73O43830 326 aaPredicted RBP12.43□□□□□ -0.42
LIME1-203ENST00000465591 IGLV7-46A0A075B6I9 117 aa12.42□□□□□ -0.42
LIME1-203ENST00000465591 OR13C6PQ8NH95 151 aa12.42□□□□□ -0.42
LIME1-203ENST00000465591 HIST1H4GQ99525 98 aa12.42□□□□□ -0.42
LIME1-203ENST00000465591 HIGD1BQ9P298 99 aa12.42□□□□□ -0.42
LIME1-203ENST00000465591 IGLV9-49A0A0B4J1Y8 123 aa12.39□□□□□ -0.43
LIME1-203ENST00000465591 MOBPQ13875 183 aa12.39□□□□□ -0.43
LIME1-203ENST00000465591 TPRXLQ17RH7 258 aa12.39□□□□□ -0.43
LIME1-203ENST00000465591 C4orf48Q5BLP8 95 aa12.39□□□□□ -0.43
LIME1-203ENST00000465591 ST20-AS1Q8NBB2 130 aa12.38□□□□□ -0.43
LIME1-203ENST00000465591 MUC17Q685J3 4493 aa12.38□□□□□ -0.43
LIME1-203ENST00000465591 TRAV13-2A0A0B4J235 113 aa12.35□□□□□ -0.43
LIME1-203ENST00000465591 A6NDN8 102 aa12.35□□□□□ -0.43
LIME1-203ENST00000465591 C2orf91Q6ZV80 131 aa12.35□□□□□ -0.43
LIME1-203ENST00000465591 A4D1N5 150 aa12.34□□□□□ -0.43
LIME1-203ENST00000465591 SMIM6P0DI80 62 aa12.34□□□□□ -0.43
LIME1-203ENST00000465591 HINT1P49773 126 aaPredicted RBP12.34□□□□□ -0.43
LIME1-203ENST00000465591 SPINK1P00995 79 aa12.33□□□□□ -0.44
LIME1-203ENST00000465591 CDIP1Q9H305 208 aa12.33□□□□□ -0.44
LIME1-203ENST00000465591 UQCR10Q9UDW1 63 aa12.33□□□□□ -0.44
LIME1-203ENST00000465591 TAL2Q16559 108 aa12.32□□□□□ -0.44
LIME1-203ENST00000465591 SSBP3-AS1Q7Z2R9 100 aa12.32□□□□□ -0.44
LIME1-203ENST00000465591 LOC105371267A0A1B0GV96 52 aa12.3□□□□□ -0.44
LIME1-203ENST00000465591 FP248Q71RG6 208 aaPredicted RBP12.3□□□□□ -0.44
LIME1-203ENST00000465591 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.45
LIME1-203ENST00000465591 C6orf99Q4VX62 202 aa12.26□□□□□ -0.45
LIME1-203ENST00000465591 CEND1Q8N111 149 aa12.26□□□□□ -0.45
LIME1-203ENST00000465591 Q8N377 158 aa12.26□□□□□ -0.45
LIME1-203ENST00000465591 ELOF1P60002 83 aaKnown RBP12.25□□□□□ -0.45
LIME1-203ENST00000465591 KRTAP13-3Q3SY46 172 aa12.25□□□□□ -0.45
LIME1-203ENST00000465591 TMEM238LA0A1B0GVL6 79 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 A6NJY4 79 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 SPRR1BP22528 89 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 COX7BP24311 80 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 RPS29P62273 56 aaKnown RBP12.24□□□□□ -0.45
LIME1-203ENST00000465591 HSD52Q0P140 79 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 C12orf57Q99622 126 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 DHRS4-AS1Q9P1J3 65 aa12.24□□□□□ -0.45
LIME1-203ENST00000465591 TRBV7-6A0A0J9YX20 115 aa12.22□□□□□ -0.45
LIME1-203ENST00000465591 RAB37Q96AX2 223 aa12.22□□□□□ -0.45
LIME1-203ENST00000465591 SMIM11BQ8TCY0 68 aa12.21□□□□□ -0.45
LIME1-203ENST00000465591 PRO1933Q9H354 126 aa12.21□□□□□ -0.45
LIME1-203ENST00000465591 CFC1BP0CG36 223 aa12.2□□□□□ -0.46
LIME1-203ENST00000465591 CFC1P0CG37 223 aa12.2□□□□□ -0.46
LIME1-203ENST00000465591 FAT4Q6V0I7 4981 aa12.19□□□□□ -0.46
LIME1-203ENST00000465591 A0A0B4J2C4 111 aa12.18□□□□□ -0.46
LIME1-203ENST00000465591 A0A1B0GWB2 263 aa12.18□□□□□ -0.46
LIME1-203ENST00000465591 VAMP3Q15836 100 aa12.18□□□□□ -0.46
LIME1-203ENST00000465591 SLC25A20O43772 301 aa12.16□□□□□ -0.46
LIME1-203ENST00000465591 FXYD2P54710 66 aa12.16□□□□□ -0.46
LIME1-203ENST00000465591 TSTD3H0UI37 97 aa12.14□□□□□ -0.47
LIME1-203ENST00000465591 DEFB105AQ8NG35 78 aa12.14□□□□□ -0.47
LIME1-203ENST00000465591 A0A0U1RQV1 116 aa12.13□□□□□ -0.47
LIME1-203ENST00000465591 H7C2G1 150 aa12.13□□□□□ -0.47
LIME1-203ENST00000465591 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
LIME1-203ENST00000465591 Q1RN00 199 aa12.12□□□□□ -0.47
LIME1-203ENST00000465591 HRCT1Q6UXD1 115 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms