RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 PRO1933Q9H354 126 aa3.71□□□□□ -1.82
NUP98-208ENST00000461047 DNAH6Q9C0G6 4158 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 IGKV2-28A0A075B6P5 120 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 A4D1N5 150 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 M0R143 59 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 IGKV2D-28P01615 120 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 RPL28P46779 137 aaKnown RBP3.7□□□□□ -1.82
NUP98-208ENST00000461047 UBE2AP49459 152 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
NUP98-208ENST00000461047 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
NUP98-208ENST00000461047 HAMPP81172 84 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 VAMP3Q15836 100 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 C1orf137Q5JT78 98 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 SOSTDC1Q6X4U4 206 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 C2orf91Q6ZV80 131 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 CEND1Q8N111 149 aa3.7□□□□□ -1.82
NUP98-208ENST00000461047 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
NUP98-208ENST00000461047 ETDCA0A1B0GVM5 59 aa3.69□□□□□ -1.82
NUP98-208ENST00000461047 IGLV6-57P01721 117 aa3.69□□□□□ -1.82
NUP98-208ENST00000461047 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
NUP98-208ENST00000461047 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
NUP98-208ENST00000461047 TRAV23DV6A0A075B6W5 121 aa3.68□□□□□ -1.82
NUP98-208ENST00000461047 BCE1O60756 84 aa3.68□□□□□ -1.82
NUP98-208ENST00000461047 Q5VSD8 79 aa3.68□□□□□ -1.82
NUP98-208ENST00000461047 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
NUP98-208ENST00000461047 PRO1854Q9UHT4 67 aa3.68□□□□□ -1.82
NUP98-208ENST00000461047 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
NUP98-208ENST00000461047 LYSTQ99698 3801 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 SLC25A20O43772 301 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 ZNF73O43830 326 aaPredicted RBP3.67□□□□□ -1.82
NUP98-208ENST00000461047 IGLV7-43P04211 117 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 CTAG1AP78358 180 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 Q1RN00 199 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 SPINK6Q6UWN8 80 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 FAM19A1Q7Z5A9 133 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 LINC00337Q8N6G1 96 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 DIRC1Q969H9 104 aa3.67□□□□□ -1.82
NUP98-208ENST00000461047 NHP2Q9NX24 153 aaKnown RBP3.67□□□□□ -1.82
NUP98-208ENST00000461047 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 H0Y9J4 135 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 H7C2G1 150 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 ZNF861PO60384 105 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 COX6CP09669 75 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 CFC1P0CG37 223 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 INAFM2P0DMQ5 153 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 COX7BP24311 80 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 MT3P25713 68 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 RPL13AP40429 203 aaKnown RBP3.66□□□□□ -1.82
NUP98-208ENST00000461047 BVES-AS1Q5T3Y7 98 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 Q8NDZ9 215 aa3.66□□□□□ -1.82
NUP98-208ENST00000461047 A0A1B0GWB2 263 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 H0YGX0 51 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 PSMB2P49721 201 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 FXYD2P54710 66 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 C6orf99Q4VX62 202 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 DHRS4-AS1Q9P1J3 65 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 ZNF706Q9Y5V0 76 aaPredicted RBP3.65□□□□□ -1.83
NUP98-208ENST00000461047 RYR2Q92736 4967 aa3.65□□□□□ -1.83
NUP98-208ENST00000461047 SPRR1AP35321 89 aa3.64□□□□□ -1.83
NUP98-208ENST00000461047 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
NUP98-208ENST00000461047 HIGD2AQ9BW72 106 aa3.64□□□□□ -1.83
NUP98-208ENST00000461047 KMT2CQ8NEZ4 4911 aaKnown RBP3.64□□□□□ -1.83
NUP98-208ENST00000461047 SCGB1C2P0DMR2 95 aa3.63□□□□□ -1.83
NUP98-208ENST00000461047 PRLHP81277 87 aa3.63□□□□□ -1.83
NUP98-208ENST00000461047 BATFQ16520 125 aa3.63□□□□□ -1.83
NUP98-208ENST00000461047 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
NUP98-208ENST00000461047 Q6ZRX8 168 aa3.63□□□□□ -1.83
NUP98-208ENST00000461047 KRTAP11-1Q8IUC1 163 aa3.63□□□□□ -1.83
NUP98-208ENST00000461047 SACSQ9NZJ4 4579 aa3.62□□□□□ -1.83
NUP98-208ENST00000461047 PCP4L1A6NKN8 68 aa3.62□□□□□ -1.83
NUP98-208ENST00000461047 ELOF1P60002 83 aaKnown RBP3.62□□□□□ -1.83
NUP98-208ENST00000461047 PRR26Q8N8Z3 221 aa3.62□□□□□ -1.83
NUP98-208ENST00000461047 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
NUP98-208ENST00000461047 KRTAP4-16G5E9R7 235 aaPredicted RBP3.61□□□□□ -1.83
NUP98-208ENST00000461047 DNAH17Q9UFH2 4485 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 A0A1B0GX51 115 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 hADV29S1A0JD25 119 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 H3BQ85 93 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 K7ERJ3 54 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 DNAL4O96015 105 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 OCIAD2Q56VL3 154 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 LINC00575Q6W349 94 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
NUP98-208ENST00000461047 TSPAN13O95857 204 aa3.59□□□□□ -1.83
NUP98-208ENST00000461047 OXTP01178 125 aa3.59□□□□□ -1.83
NUP98-208ENST00000461047 CRYGAP11844 174 aa3.59□□□□□ -1.83
NUP98-208ENST00000461047 COL5A1-AS1Q5SY13 56 aa3.59□□□□□ -1.83
NUP98-208ENST00000461047 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
NUP98-208ENST00000461047 TEX49A0A1B0GTD5 131 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
NUP98-208ENST00000461047 FAM229BQ4G0N7 80 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.58□□□□□ -1.84
NUP98-208ENST00000461047 PPDPFLQ8WWR9 84 aa3.58□□□□□ -1.84
NUP98-208ENST00000461047 SPRR4Q96PI1 79 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms