RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 TRBV7-6A0A0J9YX20 115 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 C3orf79P0CE67 100 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 TTTY13Q9BZ97 58 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 ZNF73O43830 326 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 Q8IZM0 81 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 FREM2Q5SZK8 3169 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 TSHBP01222 138 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 hDV103S1A0JD37 113 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 NBEAQ8NFP9 2946 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 H0YGX0 51 aa3.82□□□□□ -1.8
CDC42BPA-209ENST00000448940 NIPBLQ6KC79 2804 aaeCLIP3.81□□□□□ -1.8
CDC42BPA-209ENST00000448940 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-209ENST00000448940 SPINK1P00995 79 aa3.81□□□□□ -1.8
CDC42BPA-209ENST00000448940 COX7CP15954 63 aa3.81□□□□□ -1.8
CDC42BPA-209ENST00000448940 PDE6GP18545 87 aa3.81□□□□□ -1.8
CDC42BPA-209ENST00000448940 C8orf17Q9NRJ1 99 aa3.81□□□□□ -1.8
CDC42BPA-209ENST00000448940 ERC2-IT1O76042 136 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 C11orf86A6NJI1 115 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 USP34Q70CQ2 3546 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 CCDC179H3BU77 68 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 ATP5EP2Q5VTU8 51 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 Q6ZRU5 148 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
CDC42BPA-209ENST00000448940 SEC61BP60468 96 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-209ENST00000448940 MT-ATP8P03928 68 aa3.79□□□□□ -1.8
CDC42BPA-209ENST00000448940 COX17Q14061 63 aa3.79□□□□□ -1.8
CDC42BPA-209ENST00000448940 COLCA2A8K830 154 aa3.79□□□□□ -1.8
CDC42BPA-209ENST00000448940 GIG44P09565 113 aaPredicted RBP3.79□□□□□ -1.8
CDC42BPA-209ENST00000448940 LCA10Q71F78 164 aa3.79□□□□□ -1.8
CDC42BPA-209ENST00000448940 A8MTW9 85 aa3.78□□□□□ -1.8
CDC42BPA-209ENST00000448940 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
CDC42BPA-209ENST00000448940 TRBV7-7A0A0K0K1E9 115 aa3.78□□□□□ -1.81
CDC42BPA-209ENST00000448940 WFDC13Q8IUB5 93 aa3.78□□□□□ -1.81
CDC42BPA-209ENST00000448940 Q96NJ1 140 aa3.78□□□□□ -1.81
CDC42BPA-209ENST00000448940 CNFNQ9BYD5 112 aa3.78□□□□□ -1.81
CDC42BPA-209ENST00000448940 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 WFDC2Q14508 124 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGHV6-1A0A0B4J1U7 121 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 BOD1L1Q8NFC6 3051 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 DNAH14Q0VDD8 3507 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
CDC42BPA-209ENST00000448940 COX8AP10176 69 aa3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 ZNF22P17026 224 aaPredicted RBP3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 COX8CQ7Z4L0 72 aa3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 CCKP06307 115 aa3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 ADCYAP1P18509 176 aa3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 FAM19A4Q96LR4 140 aa3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 DMXL1Q9Y485 3027 aa3.76□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGLV5-37A0A075B6J1 123 aa3.75□□□□□ -1.81
CDC42BPA-209ENST00000448940 A0A1B0GU69 56 aa3.75□□□□□ -1.81
CDC42BPA-209ENST00000448940 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
CDC42BPA-209ENST00000448940 LINC00612Q8N6U2 182 aa3.75□□□□□ -1.81
CDC42BPA-209ENST00000448940 A0A1B0GXF2 115 aa3.75□□□□□ -1.81
CDC42BPA-209ENST00000448940 KIAA0087Q14695 138 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGLV1-50A0A075B6I6 118 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 BCE1O60756 84 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 GVQW2A0A096LPI5 108 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 ZZEF1O43149 2961 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 NBPF19A0A087WUL8 3843 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGKV2D-30A0A075B6S6 120 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
CDC42BPA-209ENST00000448940 PRR26Q8N8Z3 221 aa3.73□□□□□ -1.81
CDC42BPA-209ENST00000448940 LINC00208Q96KT6 92 aa3.73□□□□□ -1.81
CDC42BPA-209ENST00000448940 NTM-AS1Q6ZSK4 140 aa3.73□□□□□ -1.81
CDC42BPA-209ENST00000448940 Q8N3U1 123 aa3.73□□□□□ -1.81
CDC42BPA-209ENST00000448940 SMIM1B2RUZ4 78 aa3.73□□□□□ -1.81
CDC42BPA-209ENST00000448940 Q8N1X5 172 aa3.73□□□□□ -1.81
CDC42BPA-209ENST00000448940 ZNF861PO60384 105 aa3.72□□□□□ -1.81
CDC42BPA-209ENST00000448940 TENM1Q9UKZ4 2725 aa3.72□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGLV7-43P04211 117 aa3.72□□□□□ -1.81
CDC42BPA-209ENST00000448940 A0A087WVE0 104 aa3.72□□□□□ -1.81
CDC42BPA-209ENST00000448940 IGLV5-39A0A0G2JS06 123 aa3.71□□□□□ -1.81
CDC42BPA-209ENST00000448940 PCOTHQ58A44 107 aa3.71□□□□□ -1.82
CDC42BPA-209ENST00000448940 C7orf65Q6ZTY9 151 aa3.71□□□□□ -1.82
CDC42BPA-209ENST00000448940 HCG22E2RYF7 251 aa3.71□□□□□ -1.82
CDC42BPA-209ENST00000448940 Q6JHZ5 121 aa3.71□□□□□ -1.82
CDC42BPA-209ENST00000448940 LINC00167Q96N53 147 aa3.71□□□□□ -1.82
CDC42BPA-209ENST00000448940 LINC00313P59037 77 aa3.7□□□□□ -1.82
CDC42BPA-209ENST00000448940 TRAV22A0A0B4J277 110 aa3.7□□□□□ -1.82
CDC42BPA-209ENST00000448940 Q8NBF4 154 aa3.7□□□□□ -1.82
CDC42BPA-209ENST00000448940 IGHV3OR16-9A0A0B4J2B5 98 aa3.7□□□□□ -1.82
CDC42BPA-209ENST00000448940 LINC00308Q8TCZ7 52 aa3.7□□□□□ -1.82
CDC42BPA-209ENST00000448940 LINC00483Q53H64 154 aa3.69□□□□□ -1.82
CDC42BPA-209ENST00000448940 TENM2Q9NT68 2774 aa3.69□□□□□ -1.82
CDC42BPA-209ENST00000448940 TRAV7A0A075B6U4 112 aa3.69□□□□□ -1.82
CDC42BPA-209ENST00000448940 C6orf48Q9UBA6 75 aa3.69□□□□□ -1.82
CDC42BPA-209ENST00000448940 ZFHX3Q15911 3703 aa3.69□□□□□ -1.82
CDC42BPA-209ENST00000448940 GAS8-AS1O95177 125 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 MXRA5Q9NR99 2828 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 IGIPA6NJ69 53 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 CNBPP62633 177 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms