RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 SNURFQ9Y675 71 aa10.05□□□□□ -0.8
APP-208ENST00000439274 Q8N9L7 120 aa10.05□□□□□ -0.8
APP-208ENST00000439274 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
APP-208ENST00000439274 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
APP-208ENST00000439274 BCE1O60756 84 aa10.03□□□□□ -0.8
APP-208ENST00000439274 C7orf33Q8WU49 177 aa10.03□□□□□ -0.8
APP-208ENST00000439274 TM2D3Q9BRN9 247 aa10.03□□□□□ -0.8
APP-208ENST00000439274 H7BZZ5 65 aa10.03□□□□□ -0.8
APP-208ENST00000439274 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
APP-208ENST00000439274 RMI2Q96E14 147 aa10.03□□□□□ -0.8
APP-208ENST00000439274 STAB1Q9NY15 2570 aa10.01□□□□□ -0.81
APP-208ENST00000439274 FAM236DA0A1B0GTK5 79 aa10.01□□□□□ -0.81
APP-208ENST00000439274 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
APP-208ENST00000439274 FAM236CP0DP71 79 aa10.01□□□□□ -0.81
APP-208ENST00000439274 C11orf45Q8TAV5 145 aa10□□□□□ -0.81
APP-208ENST00000439274 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
APP-208ENST00000439274 FAM168BA1KXE4 195 aa10□□□□□ -0.81
APP-208ENST00000439274 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
APP-208ENST00000439274 Q8N377 158 aa9.99□□□□□ -0.81
APP-208ENST00000439274 KLKP1Q107X0 134 aa9.99□□□□□ -0.81
APP-208ENST00000439274 CASC10Q5T4H9 136 aa9.99□□□□□ -0.81
APP-208ENST00000439274 BPY2O14599 106 aa9.98□□□□□ -0.81
APP-208ENST00000439274 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
APP-208ENST00000439274 MAST4O15021 2626 aa9.97□□□□□ -0.81
APP-208ENST00000439274 NREPQ16612 68 aa9.97□□□□□ -0.81
APP-208ENST00000439274 NOTCH1P46531 2555 aa9.96□□□□□ -0.81
APP-208ENST00000439274 IGKV4-1P06312 121 aa9.96□□□□□ -0.81
APP-208ENST00000439274 DNAH10OSP0CZ25 163 aa9.96□□□□□ -0.82
APP-208ENST00000439274 C4orf26Q17RF5 130 aa9.96□□□□□ -0.82
APP-208ENST00000439274 F8WEM9 126 aa9.95□□□□□ -0.82
APP-208ENST00000439274 F8WDY8 70 aa9.95□□□□□ -0.82
APP-208ENST00000439274 Q5XG85 94 aa9.95□□□□□ -0.82
APP-208ENST00000439274 Q9BRP9 147 aa9.95□□□□□ -0.82
APP-208ENST00000439274 DNAH1Q9P2D7 4330 aa9.94□□□□□ -0.82
APP-208ENST00000439274 ST20-AS1Q8NBB2 130 aa9.93□□□□□ -0.82
APP-208ENST00000439274 Q6ZRX8 168 aa9.93□□□□□ -0.82
APP-208ENST00000439274 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
APP-208ENST00000439274 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
APP-208ENST00000439274 IGLV5-48A0A075B6I7 105 aa9.91□□□□□ -0.82
APP-208ENST00000439274 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
APP-208ENST00000439274 C5orf47Q569G3 176 aa9.91□□□□□ -0.82
APP-208ENST00000439274 TLX1NBP0CAT3 122 aa9.91□□□□□ -0.82
APP-208ENST00000439274 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
APP-208ENST00000439274 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.83
APP-208ENST00000439274 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.83
APP-208ENST00000439274 MRAPQ8TCY5 172 aa9.9□□□□□ -0.83
APP-208ENST00000439274 A0A1W2PNM2 257 aa9.89□□□□□ -0.83
APP-208ENST00000439274 PRB2P02812 416 aaPredicted RBP9.89□□□□□ -0.83
APP-208ENST00000439274 DHRS4-AS1Q9P1J3 65 aa9.89□□□□□ -0.83
APP-208ENST00000439274 PLA2G2DQ9UNK4 145 aa9.89□□□□□ -0.83
APP-208ENST00000439274 SERP1Q9Y6X1 66 aa9.89□□□□□ -0.83
APP-208ENST00000439274 ERC2-IT1O76042 136 aa9.88□□□□□ -0.83
APP-208ENST00000439274 TMEM254Q8TBM7 123 aa9.88□□□□□ -0.83
APP-208ENST00000439274 PRYO14603 147 aa9.87□□□□□ -0.83
APP-208ENST00000439274 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
APP-208ENST00000439274 SPRR1AP35321 89 aa9.87□□□□□ -0.83
APP-208ENST00000439274 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
APP-208ENST00000439274 C1orf137Q5JT78 98 aa9.86□□□□□ -0.83
APP-208ENST00000439274 OCR1Q9BZK8 76 aa9.86□□□□□ -0.83
APP-208ENST00000439274 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
APP-208ENST00000439274 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
APP-208ENST00000439274 TNP2Q05952 138 aa9.85□□□□□ -0.83
APP-208ENST00000439274 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
APP-208ENST00000439274 DNAH10Q8IVF4 4471 aa9.83□□□□□ -0.84
APP-208ENST00000439274 UBE2BP63146 152 aa9.83□□□□□ -0.84
APP-208ENST00000439274 HUWE1Q7Z6Z7 4374 aaKnown RBP9.83□□□□□ -0.84
APP-208ENST00000439274 NBEAL1Q6ZS30 2694 aa9.82□□□□□ -0.84
APP-208ENST00000439274 NDUFC1O43677 76 aa9.82□□□□□ -0.84
APP-208ENST00000439274 Q8NBF4 154 aa9.82□□□□□ -0.84
APP-208ENST00000439274 LYSTQ99698 3801 aa9.82□□□□□ -0.84
APP-208ENST00000439274 SMIM29Q86T20 159 aa9.81□□□□□ -0.84
APP-208ENST00000439274 MDFIQ99750 246 aa9.81□□□□□ -0.84
APP-208ENST00000439274 A0A0G2JQZ4 141 aa9.81□□□□□ -0.84
APP-208ENST00000439274 A0A1W2PNN7 141 aa9.81□□□□□ -0.84
APP-208ENST00000439274 FAM30AQ9NZY2 134 aa9.8□□□□□ -0.84
APP-208ENST00000439274 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
APP-208ENST00000439274 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
APP-208ENST00000439274 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
APP-208ENST00000439274 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
APP-208ENST00000439274 SPRR4Q96PI1 79 aa9.77□□□□□ -0.85
APP-208ENST00000439274 DSCR10P59022 87 aa9.76□□□□□ -0.85
APP-208ENST00000439274 LINC00474Q9P2X8 69 aa9.76□□□□□ -0.85
APP-208ENST00000439274 K7EQZ3 153 aa9.75□□□□□ -0.85
APP-208ENST00000439274 IGKV2-24A0A0C4DH68 120 aa9.75□□□□□ -0.85
APP-208ENST00000439274 A0A1B0GW54 56 aa9.75□□□□□ -0.85
APP-208ENST00000439274 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
APP-208ENST00000439274 PRLHP81277 87 aa9.74□□□□□ -0.85
APP-208ENST00000439274 K7EIL1 84 aa9.74□□□□□ -0.85
APP-208ENST00000439274 A0A096LNI7 61 aa9.73□□□□□ -0.85
APP-208ENST00000439274 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
APP-208ENST00000439274 ATP5EP56381 51 aaPredicted RBP9.73□□□□□ -0.85
APP-208ENST00000439274 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
APP-208ENST00000439274 DNAH9Q9NYC9 4486 aa9.72□□□□□ -0.85
APP-208ENST00000439274 DEFB116Q30KQ4 102 aa9.71□□□□□ -0.85
APP-208ENST00000439274 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.85
APP-208ENST00000439274 IGFL1Q6UW32 110 aa9.7□□□□□ -0.86
APP-208ENST00000439274 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
APP-208ENST00000439274 CSMD3Q7Z407 3707 aa9.69□□□□□ -0.86
APP-208ENST00000439274 STAB2Q8WWQ8 2551 aa9.67□□□□□ -0.86
APP-208ENST00000439274 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms