RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 C9orf129Q5T035 196 aaKnown RBP7.78□□□□□ -1.16
PTCH1-209ENST00000437951 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
PTCH1-209ENST00000437951 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.17
PTCH1-209ENST00000437951 H3BS24 57 aa7.77□□□□□ -1.17
PTCH1-209ENST00000437951 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
PTCH1-209ENST00000437951 PHF5AQ7RTV0 110 aaKnown RBP7.76□□□□□ -1.17
PTCH1-209ENST00000437951 IGFL1Q6UW32 110 aa7.75□□□□□ -1.17
PTCH1-209ENST00000437951 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
PTCH1-209ENST00000437951 IGLV1-50A0A075B6I6 118 aa7.74□□□□□ -1.17
PTCH1-209ENST00000437951 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
PTCH1-209ENST00000437951 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
PTCH1-209ENST00000437951 RTL8CO15255 209 aa7.72□□□□□ -1.17
PTCH1-209ENST00000437951 EP400Q96L91 3159 aa7.71□□□□□ -1.17
PTCH1-209ENST00000437951 GOLGB1Q14789 3259 aaKnown RBP7.7□□□□□ -1.18
PTCH1-209ENST00000437951 DNAH10OSP0CZ25 163 aa7.7□□□□□ -1.18
PTCH1-209ENST00000437951 WWC2-AS2Q96NR7 200 aa7.7□□□□□ -1.18
PTCH1-209ENST00000437951 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
PTCH1-209ENST00000437951 KRTAP10-9P60411 292 aa7.68□□□□□ -1.18
PTCH1-209ENST00000437951 KLK9Q2XQG4 91 aa7.67□□□□□ -1.18
PTCH1-209ENST00000437951 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
PTCH1-209ENST00000437951 OBSCN-AS1Q96MR7 158 aa7.67□□□□□ -1.18
PTCH1-209ENST00000437951 EPG5Q9HCE0 2579 aa7.66□□□□□ -1.18
PTCH1-209ENST00000437951 Q8N377 158 aa7.66□□□□□ -1.18
PTCH1-209ENST00000437951 DSCR10P59022 87 aa7.65□□□□□ -1.18
PTCH1-209ENST00000437951 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.19
PTCH1-209ENST00000437951 NBDYA0A0U1RRE5 68 aa7.64□□□□□ -1.19
PTCH1-209ENST00000437951 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
PTCH1-209ENST00000437951 OCR1Q9BZK8 76 aa7.64□□□□□ -1.19
PTCH1-209ENST00000437951 IGLV7-46A0A075B6I9 117 aa7.63□□□□□ -1.19
PTCH1-209ENST00000437951 CDSNQ15517 529 aa7.63□□□□□ -1.19
PTCH1-209ENST00000437951 ASB16-AS1Q495Z4 193 aa7.61□□□□□ -1.19
PTCH1-209ENST00000437951 ZNF861PO60384 105 aa7.6□□□□□ -1.19
PTCH1-209ENST00000437951 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
PTCH1-209ENST00000437951 Q8NAQ8 132 aa7.59□□□□□ -1.19
PTCH1-209ENST00000437951 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
PTCH1-209ENST00000437951 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.19
PTCH1-209ENST00000437951 LINC00588Q9Y4M8 146 aa7.58□□□□□ -1.2
PTCH1-209ENST00000437951 HECTD1Q9ULT8 2610 aa7.58□□□□□ -1.2
PTCH1-209ENST00000437951 Q5XG85 94 aa7.58□□□□□ -1.2
PTCH1-209ENST00000437951 PRR34Q9NV39 138 aa7.57□□□□□ -1.2
PTCH1-209ENST00000437951 A0A1B0GU33 70 aa7.57□□□□□ -1.2
PTCH1-209ENST00000437951 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
PTCH1-209ENST00000437951 A0A0D9SG42 100 aa7.56□□□□□ -1.2
PTCH1-209ENST00000437951 CFAP46Q8IYW2 2715 aa7.55□□□□□ -1.2
PTCH1-209ENST00000437951 C9orf163Q8N9P6 203 aa7.55□□□□□ -1.2
PTCH1-209ENST00000437951 COL4A2P08572 1712 aa7.54□□□□□ -1.2
PTCH1-209ENST00000437951 IGLV5-37A0A075B6J1 123 aa7.54□□□□□ -1.2
PTCH1-209ENST00000437951 CEP295Q9C0D2 2601 aa7.52□□□□□ -1.21
PTCH1-209ENST00000437951 MAST4O15021 2626 aa7.52□□□□□ -1.21
PTCH1-209ENST00000437951 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
PTCH1-209ENST00000437951 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
PTCH1-209ENST00000437951 AKAP13Q12802 2813 aa7.5□□□□□ -1.21
PTCH1-209ENST00000437951 MGAM2Q2M2H8 2515 aa7.49□□□□□ -1.21
PTCH1-209ENST00000437951 A0A1W2PNM2 257 aa7.49□□□□□ -1.21
PTCH1-209ENST00000437951 EIF4EBP3O60516 100 aaPredicted RBP7.47□□□□□ -1.21
PTCH1-209ENST00000437951 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
PTCH1-209ENST00000437951 C9orf92A6NGG3 77 aa7.46□□□□□ -1.22
PTCH1-209ENST00000437951 CSAG1Q6PB30 78 aa7.46□□□□□ -1.22
PTCH1-209ENST00000437951 Q5VV11 94 aa7.45□□□□□ -1.22
PTCH1-209ENST00000437951 KRTAP24-1Q3LI83 254 aa7.45□□□□□ -1.22
PTCH1-209ENST00000437951 A0A1W2PPR1 153 aa7.45□□□□□ -1.22
PTCH1-209ENST00000437951 M0R2T5 61 aa7.45□□□□□ -1.22
PTCH1-209ENST00000437951 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
PTCH1-209ENST00000437951 Q8N1X5 172 aa7.45□□□□□ -1.22
PTCH1-209ENST00000437951 PRR26Q8N8Z3 221 aa7.44□□□□□ -1.22
PTCH1-209ENST00000437951 ATRQ13535 2644 aa7.44□□□□□ -1.22
PTCH1-209ENST00000437951 DNAH12Q6ZR08 3092 aa7.43□□□□□ -1.22
PTCH1-209ENST00000437951 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
PTCH1-209ENST00000437951 TNP2Q05952 138 aa7.43□□□□□ -1.22
PTCH1-209ENST00000437951 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
PTCH1-209ENST00000437951 HRES1P13985 223 aa7.42□□□□□ -1.22
PTCH1-209ENST00000437951 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
PTCH1-209ENST00000437951 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
PTCH1-209ENST00000437951 DMBT1Q9UGM3 2413 aaPredicted RBP7.39□□□□□ -1.23
PTCH1-209ENST00000437951 STAB1Q9NY15 2570 aa7.39□□□□□ -1.23
PTCH1-209ENST00000437951 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
PTCH1-209ENST00000437951 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
PTCH1-209ENST00000437951 ROMO1P60602 79 aa7.38□□□□□ -1.23
PTCH1-209ENST00000437951 ZNF575Q86XF7 245 aa7.38□□□□□ -1.23
PTCH1-209ENST00000437951 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
PTCH1-209ENST00000437951 SPINK7P58062 85 aa7.37□□□□□ -1.23
PTCH1-209ENST00000437951 SMR3BP02814 79 aaPredicted RBP7.35□□□□□ -1.23
PTCH1-209ENST00000437951 Q6ZSA8 131 aa7.34□□□□□ -1.23
PTCH1-209ENST00000437951 PSORS1C2Q9UIG4 136 aa7.33□□□□□ -1.24
PTCH1-209ENST00000437951 A0A087WTM6 91 aa7.32□□□□□ -1.24
PTCH1-209ENST00000437951 CEP350Q5VT06 3117 aa7.31□□□□□ -1.24
PTCH1-209ENST00000437951 GIG44P09565 113 aaPredicted RBP7.31□□□□□ -1.24
PTCH1-209ENST00000437951 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
PTCH1-209ENST00000437951 A0A0G2JQZ4 141 aa7.3□□□□□ -1.24
PTCH1-209ENST00000437951 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
PTCH1-209ENST00000437951 UTRNP46939 3433 aa7.3□□□□□ -1.24
PTCH1-209ENST00000437951 S4R3F8 94 aa7.29□□□□□ -1.24
PTCH1-209ENST00000437951 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
PTCH1-209ENST00000437951 MMP24-AS1A0A0U1RRL7 71 aa7.28□□□□□ -1.24
PTCH1-209ENST00000437951 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
PTCH1-209ENST00000437951 FLNAP21333 2647 aaKnown RBP7.27□□□□□ -1.25
PTCH1-209ENST00000437951 HELZ2Q9BYK8 2649 aaKnown RBP7.26□□□□□ -1.25
PTCH1-209ENST00000437951 K7EIL1 84 aa7.26□□□□□ -1.25
PTCH1-209ENST00000437951 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
PTCH1-209ENST00000437951 C5orf42Q9H799 3197 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms