RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PRYO14603 147 aa10.63□□□□□ -0.71
VCP-202ENST00000417448 S100A7L2Q5SY68 101 aa10.63□□□□□ -0.71
VCP-202ENST00000417448 MUSTN1Q8IVN3 82 aa10.63□□□□□ -0.71
VCP-202ENST00000417448 KCNQ1DNQ9H478 68 aa10.63□□□□□ -0.71
VCP-202ENST00000417448 PAM16Q9Y3D7 125 aa10.63□□□□□ -0.71
VCP-202ENST00000417448 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
VCP-202ENST00000417448 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
VCP-202ENST00000417448 C14orf144Q96I85 54 aa10.61□□□□□ -0.71
VCP-202ENST00000417448 MUC17Q685J3 4493 aa10.6□□□□□ -0.71
VCP-202ENST00000417448 IGLV6-57P01721 117 aa10.6□□□□□ -0.71
VCP-202ENST00000417448 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
VCP-202ENST00000417448 HIGD2AQ9BW72 106 aa10.6□□□□□ -0.71
VCP-202ENST00000417448 SPRR1AP35321 89 aa10.59□□□□□ -0.71
VCP-202ENST00000417448 LINC00337Q8N6G1 96 aa10.59□□□□□ -0.71
VCP-202ENST00000417448 CRCT1Q9UGL9 99 aa10.59□□□□□ -0.71
VCP-202ENST00000417448 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.72
VCP-202ENST00000417448 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
VCP-202ENST00000417448 COX8AP10176 69 aa10.58□□□□□ -0.72
VCP-202ENST00000417448 PYY3Q5JQD4 70 aa10.58□□□□□ -0.72
VCP-202ENST00000417448 VAMP8Q9BV40 100 aa10.57□□□□□ -0.72
VCP-202ENST00000417448 TRAV23DV6A0A075B6W5 121 aa10.56□□□□□ -0.72
VCP-202ENST00000417448 IFITM1P13164 125 aa10.56□□□□□ -0.72
VCP-202ENST00000417448 B5MCH6 92 aa10.55□□□□□ -0.72
VCP-202ENST00000417448 LCE2DQ5TA82 110 aaPredicted RBP10.55□□□□□ -0.72
VCP-202ENST00000417448 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
VCP-202ENST00000417448 A0A087X002 238 aa10.53□□□□□ -0.72
VCP-202ENST00000417448 S100A12P80511 92 aa10.53□□□□□ -0.72
VCP-202ENST00000417448 Q6ZVH6 145 aa10.53□□□□□ -0.72
VCP-202ENST00000417448 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
VCP-202ENST00000417448 ERC2-IT1O76042 136 aa10.52□□□□□ -0.73
VCP-202ENST00000417448 A6NDN8 102 aa10.51□□□□□ -0.73
VCP-202ENST00000417448 TSPAN13O95857 204 aa10.51□□□□□ -0.73
VCP-202ENST00000417448 LINC00518Q8N0U6 118 aa10.51□□□□□ -0.73
VCP-202ENST00000417448 Q9BRP9 147 aa10.51□□□□□ -0.73
VCP-202ENST00000417448 RPL13AP40429 203 aaKnown RBP10.5□□□□□ -0.73
VCP-202ENST00000417448 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
VCP-202ENST00000417448 HIST1H4GQ99525 98 aa10.5□□□□□ -0.73
VCP-202ENST00000417448 A4D1N5 150 aa10.49□□□□□ -0.73
VCP-202ENST00000417448 DLEU1O43261 78 aa10.49□□□□□ -0.73
VCP-202ENST00000417448 C12orf57Q99622 126 aa10.49□□□□□ -0.73
VCP-202ENST00000417448 PPDPFQ9H3Y8 114 aa10.49□□□□□ -0.73
VCP-202ENST00000417448 KRTAP13-2Q52LG2 175 aa10.48□□□□□ -0.73
VCP-202ENST00000417448 SLC25A34Q6PIV7 304 aa10.48□□□□□ -0.73
VCP-202ENST00000417448 C2orf91Q6ZV80 131 aa10.48□□□□□ -0.73
VCP-202ENST00000417448 Q6ZRX8 168 aa10.47□□□□□ -0.73
VCP-202ENST00000417448 SPRR4Q96PI1 79 aa10.47□□□□□ -0.73
VCP-202ENST00000417448 CRYGAP11844 174 aa10.45□□□□□ -0.74
VCP-202ENST00000417448 C6orf99Q4VX62 202 aa10.45□□□□□ -0.74
VCP-202ENST00000417448 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
VCP-202ENST00000417448 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
VCP-202ENST00000417448 ST20-AS1Q8NBB2 130 aa10.43□□□□□ -0.74
VCP-202ENST00000417448 COX7BP24311 80 aa10.42□□□□□ -0.74
VCP-202ENST00000417448 TYMSOSQ8TAI1 123 aa10.42□□□□□ -0.74
VCP-202ENST00000417448 SMIM11BQ8TCY0 68 aa10.42□□□□□ -0.74
VCP-202ENST00000417448 HIGD1BQ9P298 99 aa10.42□□□□□ -0.74
VCP-202ENST00000417448 TRAV13-2A0A0B4J235 113 aa10.41□□□□□ -0.74
VCP-202ENST00000417448 HINT1P49773 126 aaPredicted RBP10.41□□□□□ -0.74
VCP-202ENST00000417448 FAM229BQ4G0N7 80 aa10.41□□□□□ -0.74
VCP-202ENST00000417448 CBY1Q9Y3M2 126 aa10.4□□□□□ -0.74
VCP-202ENST00000417448 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
VCP-202ENST00000417448 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
VCP-202ENST00000417448 RETNLBQ9BQ08 111 aa10.38□□□□□ -0.75
VCP-202ENST00000417448 H7C2G1 150 aa10.36□□□□□ -0.75
VCP-202ENST00000417448 CFC1BP0CG36 223 aa10.36□□□□□ -0.75
VCP-202ENST00000417448 CFC1P0CG37 223 aa10.36□□□□□ -0.75
VCP-202ENST00000417448 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
VCP-202ENST00000417448 PRO1933Q9H354 126 aa10.35□□□□□ -0.75
VCP-202ENST00000417448 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
VCP-202ENST00000417448 LINC00483Q53H64 154 aa10.34□□□□□ -0.75
VCP-202ENST00000417448 CEND1Q8N111 149 aa10.34□□□□□ -0.75
VCP-202ENST00000417448 IGLV9-49A0A0B4J1Y8 123 aa10.33□□□□□ -0.76
VCP-202ENST00000417448 FXYD2P54710 66 aa10.33□□□□□ -0.76
VCP-202ENST00000417448 DHRS4-AS1Q9P1J3 65 aa10.33□□□□□ -0.76
VCP-202ENST00000417448 DEFB105AQ8NG35 78 aa10.32□□□□□ -0.76
VCP-202ENST00000417448 TRBV7-6A0A0J9YX20 115 aa10.31□□□□□ -0.76
VCP-202ENST00000417448 A0A1B0GWB2 263 aa10.31□□□□□ -0.76
VCP-202ENST00000417448 TAL2Q16559 108 aa10.31□□□□□ -0.76
VCP-202ENST00000417448 RAB37Q96AX2 223 aa10.31□□□□□ -0.76
VCP-202ENST00000417448 UQCR10Q9UDW1 63 aa10.31□□□□□ -0.76
VCP-202ENST00000417448 LOC105371267A0A1B0GV96 52 aa10.3□□□□□ -0.76
VCP-202ENST00000417448 MOBPQ13875 183 aa10.29□□□□□ -0.76
VCP-202ENST00000417448 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
VCP-202ENST00000417448 LINC01547P58512 204 aaPredicted RBP10.27□□□□□ -0.77
VCP-202ENST00000417448 HSD52Q0P140 79 aa10.27□□□□□ -0.77
VCP-202ENST00000417448 Q8NBF4 154 aa10.27□□□□□ -0.77
VCP-202ENST00000417448 A0A0B4J2C4 111 aa10.26□□□□□ -0.77
VCP-202ENST00000417448 IGLV7-46A0A075B6I9 117 aa10.25□□□□□ -0.77
VCP-202ENST00000417448 K7ERJ3 54 aa10.25□□□□□ -0.77
VCP-202ENST00000417448 VAMP3Q15836 100 aa10.25□□□□□ -0.77
VCP-202ENST00000417448 Q1RN00 199 aa10.24□□□□□ -0.77
VCP-202ENST00000417448 C9orf153Q5TBE3 101 aa10.24□□□□□ -0.77
VCP-202ENST00000417448 LINC00575Q6W349 94 aa10.24□□□□□ -0.77
VCP-202ENST00000417448 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
VCP-202ENST00000417448 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
VCP-202ENST00000417448 SPRR1BP22528 89 aa10.23□□□□□ -0.77
VCP-202ENST00000417448 KRTAP4-1Q9BYQ7 146 aa10.23□□□□□ -0.77
VCP-202ENST00000417448 PRO1854Q9UHT4 67 aa10.23□□□□□ -0.77
VCP-202ENST00000417448 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
VCP-202ENST00000417448 A6NJY4 79 aa10.22□□□□□ -0.77
VCP-202ENST00000417448 hADV29S1A0JD25 119 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms