RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 EIF5A2Q9GZV4 153 aaKnown RBP2.43□□□□□ -2.02
PTPRK-210ENST00000415055 GNG13Q9P2W3 67 aa2.43□□□□□ -2.02
PTPRK-210ENST00000415055 DDTP30046 118 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 CCL20P78556 96 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 C4orf26Q17RF5 130 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 Q6Q795 121 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 AMN1Q8IY45 258 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 PLEKHB2Q96CS7 222 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 TIMM21Q9BVV7 248 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 MED9Q9NWA0 146 aa2.42□□□□□ -2.02
PTPRK-210ENST00000415055 ZNF706Q9Y5V0 76 aaPredicted RBP2.42□□□□□ -2.02
PTPRK-210ENST00000415055 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 C9orf92A6NGG3 77 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 TMEM238C9JI98 176 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 PPP1R17O96001 155 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 RAB5BP61020 215 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 Q5BKY6 102 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 SLC25A34Q6PIV7 304 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 MBD3L1Q8WWY6 194 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 GNB1LQ9BYB4 327 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 MANBALQ9NQG1 85 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 SPANXA1Q9NS26 97 aa2.41□□□□□ -2.02
PTPRK-210ENST00000415055 A0A1B0GUT8 65 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 F8VRH5 84 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 SLC25A20O43772 301 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 MRPS36P82909 103 aaKnown RBP2.4□□□□□ -2.03
PTPRK-210ENST00000415055 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 SPRR4Q96PI1 79 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 TMEM126AQ9H061 195 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 TMEM191AQ9H0A3 160 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 USH2AO75445 5202 aa2.4□□□□□ -2.03
PTPRK-210ENST00000415055 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
PTPRK-210ENST00000415055 UMAD1C9J7I0 102 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 ARPC5O15511 151 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 PDE6DO43924 150 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 IFI27P40305 119 aaPredicted RBP2.39□□□□□ -2.03
PTPRK-210ENST00000415055 MOBPQ13875 183 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 Q8IZM0 81 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 S100ZQ8WXG8 99 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 TMEM141Q96I45 108 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 C2orf88Q9BSF0 95 aa2.39□□□□□ -2.03
PTPRK-210ENST00000415055 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
PTPRK-210ENST00000415055 HIGD1CA8MV81 97 aa2.38□□□□□ -2.03
PTPRK-210ENST00000415055 CKS2P33552 79 aa2.38□□□□□ -2.03
PTPRK-210ENST00000415055 BATFQ16520 125 aa2.38□□□□□ -2.03
PTPRK-210ENST00000415055 AKAP14Q86UN6 197 aa2.38□□□□□ -2.03
PTPRK-210ENST00000415055 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
PTPRK-210ENST00000415055 LINC00846Q9NV44 126 aa2.38□□□□□ -2.03
PTPRK-210ENST00000415055 M0R378 163 aa2.37□□□□□ -2.03
PTPRK-210ENST00000415055 RAB14P61106 215 aa2.37□□□□□ -2.03
PTPRK-210ENST00000415055 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
PTPRK-210ENST00000415055 FAM19A3Q7Z5A8 133 aa2.37□□□□□ -2.03
PTPRK-210ENST00000415055 C20orf78Q9BR46 151 aa2.37□□□□□ -2.03
PTPRK-210ENST00000415055 SMIM2Q9BVW6 85 aa2.37□□□□□ -2.03
PTPRK-210ENST00000415055 A8MUU9 505 aa2.36□□□□□ -2.03
PTPRK-210ENST00000415055 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
PTPRK-210ENST00000415055 C9orf153Q5TBE3 101 aa2.36□□□□□ -2.03
PTPRK-210ENST00000415055 SLC51BQ86UW2 128 aa2.36□□□□□ -2.03
PTPRK-210ENST00000415055 COX7B2Q8TF08 81 aa2.36□□□□□ -2.03
PTPRK-210ENST00000415055 CDKN2A-AS1Q9UH64 79 aa2.36□□□□□ -2.03
PTPRK-210ENST00000415055 KANTRA0A1W2PQU2 76 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 D6R8Y8 96 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 RPS29P62273 56 aaKnown RBP2.35□□□□□ -2.03
PTPRK-210ENST00000415055 HERVK_113P63121 156 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 SSBP3-AS1Q7Z2R9 100 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 SMCR5Q8TEV8 140 aa2.35□□□□□ -2.03
PTPRK-210ENST00000415055 TRBV24-1A0A075B6N3 115 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 ETDCA0A1B0GVM5 59 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 LINC00862A6NCI5 91 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 COLCA2A8K830 154 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 H3BQ85 93 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 NPYP01303 97 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 SEC11AP67812 179 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 HRCT1Q6UXD1 115 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 PRO0461Q9UI25 63 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
PTPRK-210ENST00000415055 A8MWP4 228 aa2.33□□□□□ -2.04
PTPRK-210ENST00000415055 SPINK8P0C7L1 97 aa2.33□□□□□ -2.04
PTPRK-210ENST00000415055 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
PTPRK-210ENST00000415055 BATF3Q9NR55 127 aa2.33□□□□□ -2.04
PTPRK-210ENST00000415055 F8W036 122 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 MRPL54Q6P161 138 aaKnown RBP2.32□□□□□ -2.04
PTPRK-210ENST00000415055 COMMD7Q86VX2 200 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 PRELID3AQ96N28 172 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 AMELXQ99217 191 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 SMIM7Q9BQ49 75 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 LIMD2Q9BT23 127 aa2.32□□□□□ -2.04
PTPRK-210ENST00000415055 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
PTPRK-210ENST00000415055 ZNF345Q14585 488 aa2.31□□□□□ -2.04
PTPRK-210ENST00000415055 C10orf91Q5T1B1 145 aa2.31□□□□□ -2.04
PTPRK-210ENST00000415055 LINC00299Q6ZSB3 139 aa2.31□□□□□ -2.04
PTPRK-210ENST00000415055 ZNF625Q96I27 306 aaPredicted RBP2.31□□□□□ -2.04
PTPRK-210ENST00000415055 OSTCQ9NRP0 149 aa2.31□□□□□ -2.04
PTPRK-210ENST00000415055 NAT8BQ9UHF3 227 aa2.31□□□□□ -2.04
PTPRK-210ENST00000415055 NCR3O14931 201 aa2.3□□□□□ -2.04
PTPRK-210ENST00000415055 ERC2-IT1O76042 136 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms