RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 IGHV3-73A0A0B4J1V6 119 aa4.35□□□□□ -1.71
NR1I3-208ENST00000412844 A0A0J9YXY3 114 aa4.35□□□□□ -1.71
NR1I3-208ENST00000412844 LEPROTO15243 131 aa4.35□□□□□ -1.71
NR1I3-208ENST00000412844 TIMM17BO60830 172 aa4.35□□□□□ -1.71
NR1I3-208ENST00000412844 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
NR1I3-208ENST00000412844 IGHV3-30-3P0DP02 117 aa4.35□□□□□ -1.71
NR1I3-208ENST00000412844 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 J3KT08 172 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 J3QQQ9 107 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 LGALS3P17931 250 aaKnown RBP4.34□□□□□ -1.71
NR1I3-208ENST00000412844 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 LINC00526Q96FQ7 95 aa4.34□□□□□ -1.71
NR1I3-208ENST00000412844 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.72
NR1I3-208ENST00000412844 LST1O00453 97 aa4.33□□□□□ -1.72
NR1I3-208ENST00000412844 LECT2O14960 151 aa4.33□□□□□ -1.72
NR1I3-208ENST00000412844 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
NR1I3-208ENST00000412844 UBE2D4Q9Y2X8 147 aa4.33□□□□□ -1.72
NR1I3-208ENST00000412844 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 LOC100131303A0A0U1RQF7 123 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 A4D1N5 150 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 CRYGAP11844 174 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
NR1I3-208ENST00000412844 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 DAND5Q8N907 189 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 TMEM243Q9BU79 118 aa4.32□□□□□ -1.72
NR1I3-208ENST00000412844 ATOX1O00244 68 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 UBE2L6O14933 153 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 TMEM258P61165 79 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
NR1I3-208ENST00000412844 C2orf82Q6UX34 121 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 OR13C6PQ8NH95 151 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
NR1I3-208ENST00000412844 IGLV4-3A0A075B6K6 122 aa4.3□□□□□ -1.72
NR1I3-208ENST00000412844 TINCRA0A1B0GVN0 87 aa4.3□□□□□ -1.72
NR1I3-208ENST00000412844 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
NR1I3-208ENST00000412844 LINC01561Q8N1V8 128 aa4.3□□□□□ -1.72
NR1I3-208ENST00000412844 Q9UF83 564 aa4.3□□□□□ -1.72
NR1I3-208ENST00000412844 TNXBP22105 4242 aa4.3□□□□□ -1.72
NR1I3-208ENST00000412844 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 TEX49A0A1B0GTD5 131 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 TRACP01848 142 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 CRPP02741 224 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 COX7CP15954 63 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 RPL39P62891 51 aaKnown RBP4.29□□□□□ -1.72
NR1I3-208ENST00000412844 HERVK_113P63121 156 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 MIAQ16674 131 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 C9orf153Q5TBE3 101 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 C9orf163Q8N9P6 203 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 C7orf33Q8WU49 177 aa4.29□□□□□ -1.72
NR1I3-208ENST00000412844 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 Q1RN00 199 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 SFTA2Q6UW10 78 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 FAM104AQ969W3 186 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 C2orf48Q96LS8 159 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 CHCHD5Q9BSY4 110 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 KLK12Q9UKR0 248 aa4.28□□□□□ -1.72
NR1I3-208ENST00000412844 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.27□□□□□ -1.73
NR1I3-208ENST00000412844 IGHV1-58A0A0C4DH39 117 aa4.27□□□□□ -1.73
NR1I3-208ENST00000412844 IGKV2-29A2NJV5 120 aaPredicted RBP4.27□□□□□ -1.73
NR1I3-208ENST00000412844 CIRBPQ14011 172 aaKnown RBP4.27□□□□□ -1.73
NR1I3-208ENST00000412844 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
NR1I3-208ENST00000412844 Q6ZRP5 223 aa4.27□□□□□ -1.73
NR1I3-208ENST00000412844 MUSTN1Q8IVN3 82 aa4.27□□□□□ -1.73
NR1I3-208ENST00000412844 COX7A2LO14548 114 aa4.26□□□□□ -1.73
NR1I3-208ENST00000412844 CNBPP62633 177 aaKnown RBP4.26□□□□□ -1.73
NR1I3-208ENST00000412844 SS18Q15532 418 aa4.26□□□□□ -1.73
NR1I3-208ENST00000412844 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 A0A087WZ39 114 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 BCE1O60756 84 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 ATP5EP2Q5VTU8 51 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 PKIGQ9Y2B9 76 aa4.25□□□□□ -1.73
NR1I3-208ENST00000412844 IGHV3OR16-9A0A0B4J2B5 98 aa4.24□□□□□ -1.73
NR1I3-208ENST00000412844 LINC00959A0A1B0GUT2 108 aa4.24□□□□□ -1.73
NR1I3-208ENST00000412844 NDUFA1O15239 70 aa4.24□□□□□ -1.73
NR1I3-208ENST00000412844 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
NR1I3-208ENST00000412844 Q6JHZ5 121 aa4.24□□□□□ -1.73
NR1I3-208ENST00000412844 SPINK6Q6UWN8 80 aa4.24□□□□□ -1.73
NR1I3-208ENST00000412844 F8WDY8 70 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 NDUFC2O95298 119 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 CD164L2Q6UWJ8 174 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
NR1I3-208ENST00000412844 SERP2Q8N6R1 65 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
NR1I3-208ENST00000412844 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms