RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 GUCA1CO95843 209 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 OCM2P0CE71 109 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 OGNP20774 298 aaKnown RBP-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 LCN1P31025 176 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 SRP9P49458 86 aaKnown RBP-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 CCDC153Q494R4 210 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 TMCO2Q7Z6W1 182 aaPredicted RBP-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 VAMP8Q9BV40 100 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 TXLNGYQ9BZA5 131 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 LZTFL1Q9NQ48 299 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 TOP2BQ02880 1626 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 EIF2AK4Q9P2K8 1649 aaKnown RBP-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 HFM1A2PYH4 1435 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 DIP2AQ14689 1571 aa-3.13□□□□□ -2.91
RNU4-88P-201ENST00000411220 ARHGAP5Q13017 1502 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 TRAV13-1A0A0B4J241 112 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 NAP1L6A6NFF2 107 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 IQCF6A8MYZ5 107 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 TCRAP04437 139 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 TRAPPC2P0DI81 140 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 TRAPPC2BP0DI82 140 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 DEFB131AP59861 70 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 PSPHP78330 225 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 SH3BGRL3Q9H299 93 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 GLTPQ9NZD2 209 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 AHSPQ9NZD4 102 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 TTC37Q6PGP7 1564 aa-3.14□□□□□ -2.91
RNU4-88P-201ENST00000411220 ERCC6Q03468 1493 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 CENPXA8MT69 81 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 H3BQ15 152 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 SFNP31947 248 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 PPP1R7Q15435 360 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 CENPQQ7L2Z9 268 aaPredicted RBP-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 CTAGE3PQ8IX95 158 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 ARL11Q969Q4 196 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 SCLT1Q96NL6 688 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 CENPKQ9BS16 269 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 RTL8AQ9BWD3 113 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 PIN4Q9Y237 131 aaKnown RBP-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 KDM5DQ9BY66 1539 aa-3.15□□□□□ -2.91
RNU4-88P-201ENST00000411220 IQCF5A8MTL0 148 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 EEF1E1-BLOC1S5C9J1V9 151 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 E7EQ34 232 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 K7EQM0 130 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 COX6CP09669 75 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 IFI27P40305 119 aaPredicted RBP-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 RANBP1P43487 201 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 RPL13AP3Q6NVV1 102 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 PET117Q6UWS5 81 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 C12orf57Q99622 126 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 CCDC32Q9BV29 185 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 AQRO60306 1485 aaKnown RBP eCLIP-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 CFTRP13569 1480 aa-3.16□□□□□ -2.92
RNU4-88P-201ENST00000411220 PIGBOS1A0A0B4J2F0 54 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 hADV29S1A0JD25 119 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 D6R8Y8 96 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 TMEM262E9PQX1 116 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 NDUFA4O00483 81 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 CASQ2O14958 399 aaPredicted RBP-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 BANF1O75531 89 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 S100A6P06703 90 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 PEX19P40855 299 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 PSME3P61289 254 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 RTL8BQ17RB0 113 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 LINC01590Q5TEZ4 76 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 BLIDQ8IZY5 108 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 TCEAL4Q96EI5 215 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 SMIM2Q9BVW6 85 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 SPC25Q9HBM1 224 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 PKIGQ9Y2B9 76 aa-3.17□□□□□ -2.92
RNU4-88P-201ENST00000411220 ABCC1P33527 1531 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 NAA20P61599 178 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 RCN2Q14257 317 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 DNAL1Q4LDG9 190 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 C10orf62Q5T681 223 aaPredicted RBP-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 ANP32BQ92688 251 aaKnown RBP-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 SPTSSAQ969W0 71 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 PPP1R2P1Q96PQ5 205 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 V9GYY9 64 aa-3.18□□□□□ -2.92
RNU4-88P-201ENST00000411220 MYOM2P54296 1465 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 SCGB2A1O75556 95 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 NDUFB6O95139 128 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 PVALBP20472 110 aaPredicted RBP-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 SDC2P34741 201 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 Q56UQ5 140 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 PPP1R2P3Q6NXS1 205 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 CTNNBIP1Q9NSA3 81 aaPredicted RBP-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 DNAJC15Q9Y5T4 150 aa-3.19□□□□□ -2.92
RNU4-88P-201ENST00000411220 TRBV25-1A0A075B6N4 114 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 A0A1B0GUT8 65 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 MIF4GDA9UHW6 222 aaKnown RBP-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 SMLR1H3BR10 107 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 SNNO75324 88 aaPredicted RBP-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 CBX3Q13185 183 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 OTUD6BQ8N6M0 293 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 BORCS8Q96FH0 119 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 ARFGEF2Q9Y6D5 1785 aa-3.2□□□□□ -2.92
RNU4-88P-201ENST00000411220 NRKQ7Z2Y5 1582 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 RB1CC1Q8TDY2 1594 aa-3.21□□□□□ -2.92
RNU4-88P-201ENST00000411220 M0QZK8 103 aa-3.21□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms