RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ATP6V1G1O75348 118 aa6.18□□□□□ -1.42
SPTLC1P3-201ENST00000403408 SPRR1BP22528 89 aa6.18□□□□□ -1.42
SPTLC1P3-201ENST00000403408 TSPEAR-AS2P59090 65 aa6.18□□□□□ -1.42
SPTLC1P3-201ENST00000403408 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
SPTLC1P3-201ENST00000403408 TRBV10-2A0A0K0K1G8 114 aa6.17□□□□□ -1.42
SPTLC1P3-201ENST00000403408 H7C2G1 150 aa6.17□□□□□ -1.42
SPTLC1P3-201ENST00000403408 HBDP02042 147 aa6.17□□□□□ -1.42
SPTLC1P3-201ENST00000403408 FABP9Q0Z7S8 132 aa6.17□□□□□ -1.42
SPTLC1P3-201ENST00000403408 C18orf32Q8TCD1 76 aa6.17□□□□□ -1.42
SPTLC1P3-201ENST00000403408 RPS10P5Q9NQ39 176 aa6.16□□□□□ -1.42
SPTLC1P3-201ENST00000403408 A0A0G2JQZ4 141 aa6.15□□□□□ -1.42
SPTLC1P3-201ENST00000403408 LINC00614P0C842 121 aa6.15□□□□□ -1.42
SPTLC1P3-201ENST00000403408 CFC1P0CG37 223 aa6.15□□□□□ -1.42
SPTLC1P3-201ENST00000403408 TRAV23DV6A0A075B6W5 121 aa6.14□□□□□ -1.43
SPTLC1P3-201ENST00000403408 MT2AP02795 61 aa6.14□□□□□ -1.43
SPTLC1P3-201ENST00000403408 HERV-K104P63124 156 aa6.14□□□□□ -1.43
SPTLC1P3-201ENST00000403408 Q6Q795 121 aa6.14□□□□□ -1.43
SPTLC1P3-201ENST00000403408 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
SPTLC1P3-201ENST00000403408 ZNF73O43830 326 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1P3-201ENST00000403408 S100A12P80511 92 aa6.13□□□□□ -1.43
SPTLC1P3-201ENST00000403408 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
SPTLC1P3-201ENST00000403408 SPANXB1Q9NS25 103 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1P3-201ENST00000403408 JOSD1Q15040 202 aaPredicted RBP6.12□□□□□ -1.43
SPTLC1P3-201ENST00000403408 Q5XG85 94 aa6.12□□□□□ -1.43
SPTLC1P3-201ENST00000403408 TRAV12-1A0A0B4J245 112 aa6.11□□□□□ -1.43
SPTLC1P3-201ENST00000403408 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
SPTLC1P3-201ENST00000403408 MT1FP04733 61 aa6.11□□□□□ -1.43
SPTLC1P3-201ENST00000403408 MYMXA0A1B0GTQ4 84 aa6.1□□□□□ -1.43
SPTLC1P3-201ENST00000403408 CD164Q04900 197 aa6.1□□□□□ -1.43
SPTLC1P3-201ENST00000403408 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
SPTLC1P3-201ENST00000403408 SMIM29Q86T20 159 aa6.1□□□□□ -1.43
SPTLC1P3-201ENST00000403408 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
SPTLC1P3-201ENST00000403408 NDUFC2O95298 119 aa6.09□□□□□ -1.43
SPTLC1P3-201ENST00000403408 Q1RN00 199 aa6.09□□□□□ -1.43
SPTLC1P3-201ENST00000403408 MAP1LC3CQ9BXW4 147 aa6.09□□□□□ -1.43
SPTLC1P3-201ENST00000403408 SEC11CQ9BY50 192 aa6.09□□□□□ -1.43
SPTLC1P3-201ENST00000403408 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
SPTLC1P3-201ENST00000403408 ADAMTSL4-AS1Q5T5F5 129 aa6.08□□□□□ -1.44
SPTLC1P3-201ENST00000403408 IFI27L1Q96BM0 104 aa6.08□□□□□ -1.44
SPTLC1P3-201ENST00000403408 NPC2P61916 151 aa6.07□□□□□ -1.44
SPTLC1P3-201ENST00000403408 COX19Q49B96 90 aa6.07□□□□□ -1.44
SPTLC1P3-201ENST00000403408 LAMTOR3Q9UHA4 124 aa6.07□□□□□ -1.44
SPTLC1P3-201ENST00000403408 TMEM218A2RU14 115 aa6.06□□□□□ -1.44
SPTLC1P3-201ENST00000403408 S100PP25815 95 aa6.06□□□□□ -1.44
SPTLC1P3-201ENST00000403408 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
SPTLC1P3-201ENST00000403408 LEPROTO15243 131 aa6.05□□□□□ -1.44
SPTLC1P3-201ENST00000403408 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
SPTLC1P3-201ENST00000403408 SLC25A34Q6PIV7 304 aa6.04□□□□□ -1.44
SPTLC1P3-201ENST00000403408 DEFB105AQ8NG35 78 aa6.04□□□□□ -1.44
SPTLC1P3-201ENST00000403408 DHRS4-AS1Q9P1J3 65 aa6.03□□□□□ -1.44
SPTLC1P3-201ENST00000403408 J3QQQ9 107 aa6.02□□□□□ -1.45
SPTLC1P3-201ENST00000403408 AKR1D1P51857 326 aa6.01□□□□□ -1.45
SPTLC1P3-201ENST00000403408 MIEN1Q9BRT3 115 aa6.01□□□□□ -1.45
SPTLC1P3-201ENST00000403408 ELOF1P60002 83 aaKnown RBP6□□□□□ -1.45
SPTLC1P3-201ENST00000403408 TAL2Q16559 108 aa6□□□□□ -1.45
SPTLC1P3-201ENST00000403408 Q75L30 129 aa6□□□□□ -1.45
SPTLC1P3-201ENST00000403408 A0A0J9YXY3 114 aa5.99□□□□□ -1.45
SPTLC1P3-201ENST00000403408 TEX49A0A1B0GTD5 131 aa5.99□□□□□ -1.45
SPTLC1P3-201ENST00000403408 H0Y8G0 127 aa5.99□□□□□ -1.45
SPTLC1P3-201ENST00000403408 HINT1P49773 126 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1P3-201ENST00000403408 CLLU1Q5K131 121 aa5.99□□□□□ -1.45
SPTLC1P3-201ENST00000403408 LITAFQ99732 161 aa5.99□□□□□ -1.45
SPTLC1P3-201ENST00000403408 NEBP20929 6669 aa5.98□□□□□ -1.45
SPTLC1P3-201ENST00000403408 COX7BP24311 80 aa5.98□□□□□ -1.45
SPTLC1P3-201ENST00000403408 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
SPTLC1P3-201ENST00000403408 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
SPTLC1P3-201ENST00000403408 IGLV5-48A0A075B6I7 105 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 C20orf202A1L168 122 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 IFITM2Q01629 132 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 RHEBQ15382 184 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 C10orf91Q5T1B1 145 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 UQCC3Q6UW78 93 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 ATP11AUNQ6ZP68 121 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 COMMD7Q86VX2 200 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 OR13C6PQ8NH95 151 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 CHCHD1Q96BP2 118 aaKnown RBP5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 PMCHL2Q9BQD1 86 aa5.97□□□□□ -1.45
SPTLC1P3-201ENST00000403408 NMUP48645 174 aa5.96□□□□□ -1.46
SPTLC1P3-201ENST00000403408 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
SPTLC1P3-201ENST00000403408 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
SPTLC1P3-201ENST00000403408 LINC00308Q8TCZ7 52 aa5.96□□□□□ -1.46
SPTLC1P3-201ENST00000403408 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
SPTLC1P3-201ENST00000403408 LINC00310P59036 64 aa5.95□□□□□ -1.46
SPTLC1P3-201ENST00000403408 PCP2Q8IVA1 136 aa5.94□□□□□ -1.46
SPTLC1P3-201ENST00000403408 SPANXCQ9NY87 97 aa5.94□□□□□ -1.46
SPTLC1P3-201ENST00000403408 MUC12Q9UKN1 5478 aa5.93□□□□□ -1.46
SPTLC1P3-201ENST00000403408 SPANXDQ9BXN6 97 aa5.93□□□□□ -1.46
SPTLC1P3-201ENST00000403408 TCL1BO95988 128 aa5.92□□□□□ -1.46
SPTLC1P3-201ENST00000403408 YPEL4Q96NS1 127 aa5.92□□□□□ -1.46
SPTLC1P3-201ENST00000403408 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
SPTLC1P3-201ENST00000403408 DPM2O94777 84 aa5.91□□□□□ -1.46
SPTLC1P3-201ENST00000403408 PLNP26678 52 aa5.91□□□□□ -1.46
SPTLC1P3-201ENST00000403408 CBY1Q9Y3M2 126 aa5.91□□□□□ -1.46
SPTLC1P3-201ENST00000403408 HSBP1O75506 76 aa5.89□□□□□ -1.47
SPTLC1P3-201ENST00000403408 IGKCP01834 107 aa5.89□□□□□ -1.47
SPTLC1P3-201ENST00000403408 HERVK_113P61574 105 aa5.89□□□□□ -1.47
SPTLC1P3-201ENST00000403408 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
SPTLC1P3-201ENST00000403408 A8MUU9 505 aa5.88□□□□□ -1.47
SPTLC1P3-201ENST00000403408 E9PLD3 99 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms