RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SCGB1D1O95968 90 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 S100A12P80511 92 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 PRR4Q16378 134 aa11.08□□□□□ -0.64
TMEM88B-201ENST00000378821 KRTAP13-2Q52LG2 175 aa11.08□□□□□ -0.64
TMEM88B-201ENST00000378821 TYMSOSQ8TAI1 123 aa11.08□□□□□ -0.64
TMEM88B-201ENST00000378821 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
TMEM88B-201ENST00000378821 B5MCH6 92 aa11.05□□□□□ -0.64
TMEM88B-201ENST00000378821 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
TMEM88B-201ENST00000378821 TSPAN13O95857 204 aa11.03□□□□□ -0.64
TMEM88B-201ENST00000378821 IFITM1P13164 125 aa11.03□□□□□ -0.64
TMEM88B-201ENST00000378821 Q6ZVH6 145 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 PPDPFQ9H3Y8 114 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 CTAG1AP78358 180 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 Q6ZRX8 168 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 LINC00518Q8N0U6 118 aa11□□□□□ -0.65
TMEM88B-201ENST00000378821 Q9BRP9 147 aa11□□□□□ -0.65
TMEM88B-201ENST00000378821 ERC2-IT1O76042 136 aa10.98□□□□□ -0.65
TMEM88B-201ENST00000378821 CBY1Q9Y3M2 126 aa10.98□□□□□ -0.65
TMEM88B-201ENST00000378821 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
TMEM88B-201ENST00000378821 COX8AP10176 69 aa10.96□□□□□ -0.65
TMEM88B-201ENST00000378821 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
TMEM88B-201ENST00000378821 TMA7Q9Y2S6 64 aaKnown RBP10.96□□□□□ -0.65
TMEM88B-201ENST00000378821 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
TMEM88B-201ENST00000378821 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
TMEM88B-201ENST00000378821 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
TMEM88B-201ENST00000378821 HINT1P49773 126 aaPredicted RBP10.92□□□□□ -0.66
TMEM88B-201ENST00000378821 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
TMEM88B-201ENST00000378821 A6NDN8 102 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 C6orf99Q4VX62 202 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 LINC00483Q53H64 154 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 VAMP8Q9BV40 100 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 MUC2Q02817 5179 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 DLEU1O43261 78 aa10.9□□□□□ -0.66
TMEM88B-201ENST00000378821 GAGE2AQ6NT46 116 aa10.9□□□□□ -0.66
TMEM88B-201ENST00000378821 C14orf144Q96I85 54 aa10.9□□□□□ -0.66
TMEM88B-201ENST00000378821 A4D1N5 150 aa10.88□□□□□ -0.67
TMEM88B-201ENST00000378821 COX7BP24311 80 aa10.88□□□□□ -0.67
TMEM88B-201ENST00000378821 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
TMEM88B-201ENST00000378821 TRAV13-2A0A0B4J235 113 aa10.87□□□□□ -0.67
TMEM88B-201ENST00000378821 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
TMEM88B-201ENST00000378821 TPRXLQ17RH7 258 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 ST20-AS1Q8NBB2 130 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 HIST1H4GQ99525 98 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
TMEM88B-201ENST00000378821 DHRS4-AS1Q9P1J3 65 aa10.85□□□□□ -0.67
TMEM88B-201ENST00000378821 TRBV7-6A0A0J9YX20 115 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 SLC25A34Q6PIV7 304 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 C2orf91Q6ZV80 131 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 SMIM11BQ8TCY0 68 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 A0A1B0GWB2 263 aa10.82□□□□□ -0.68
TMEM88B-201ENST00000378821 C12orf57Q99622 126 aa10.82□□□□□ -0.68
TMEM88B-201ENST00000378821 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
TMEM88B-201ENST00000378821 IGLV9-49A0A0B4J1Y8 123 aa10.81□□□□□ -0.68
TMEM88B-201ENST00000378821 Q8NBF4 154 aa10.81□□□□□ -0.68
TMEM88B-201ENST00000378821 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
TMEM88B-201ENST00000378821 MOBPQ13875 183 aa10.8□□□□□ -0.68
TMEM88B-201ENST00000378821 A0A0U1RQV1 116 aa10.78□□□□□ -0.68
TMEM88B-201ENST00000378821 SPRR1BP22528 89 aa10.77□□□□□ -0.69
TMEM88B-201ENST00000378821 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
TMEM88B-201ENST00000378821 CDIP1Q9H305 208 aa10.75□□□□□ -0.69
TMEM88B-201ENST00000378821 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
TMEM88B-201ENST00000378821 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 CFC1P0CG37 223 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 SPINK1P00995 79 aa10.72□□□□□ -0.69
TMEM88B-201ENST00000378821 TAL2Q16559 108 aa10.72□□□□□ -0.69
TMEM88B-201ENST00000378821 DEFB105AQ8NG35 78 aa10.72□□□□□ -0.69
TMEM88B-201ENST00000378821 CEND1Q8N111 149 aa10.71□□□□□ -0.69
TMEM88B-201ENST00000378821 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 VAMP3Q15836 100 aa10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 NHP2Q9NX24 153 aaKnown RBP10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 IGLV5-48A0A075B6I7 105 aa10.69□□□□□ -0.7
TMEM88B-201ENST00000378821 A0A0B4J2C4 111 aa10.69□□□□□ -0.7
TMEM88B-201ENST00000378821 RAB37Q96AX2 223 aa10.69□□□□□ -0.7
TMEM88B-201ENST00000378821 MUC17Q685J3 4493 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 TEX49A0A1B0GTD5 131 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 H7C2G1 150 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 LINC00575Q6W349 94 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 LAMTOR3Q9UHA4 124 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 FXYD2P54710 66 aa10.67□□□□□ -0.7
TMEM88B-201ENST00000378821 Q1RN00 199 aa10.67□□□□□ -0.7
TMEM88B-201ENST00000378821 SLC25A20O43772 301 aa10.66□□□□□ -0.7
TMEM88B-201ENST00000378821 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
TMEM88B-201ENST00000378821 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
TMEM88B-201ENST00000378821 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 A6NJY4 79 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 HSD52Q0P140 79 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 BVES-AS1Q5T3Y7 98 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 Q8N377 158 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms