RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 TEX15Q9BXT5 2789 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 C10orf99Q6UWK7 81 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 PSPHP1O15172 72 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 LY6G6CO95867 125 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 DEFB131BA0A096LNP1 70 aa2.79□□□□□ -1.96
SYNE2-204ENST00000358025 EPG5Q9HCE0 2579 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 CELSR3Q9NYQ7 3312 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 CSNK1G2-AS1Q8NCQ2 148 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 Q6ZTC4 211 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 COL6A3P12111 3177 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 LCA10Q71F78 164 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 C9orf116Q5BN46 136 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-204ENST00000358025 Q75L30 129 aa2.78□□□□□ -1.96
SYNE2-204ENST00000358025 C11orf45Q8TAV5 145 aa2.78□□□□□ -1.97
SYNE2-204ENST00000358025 C7orf65Q6ZTY9 151 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 NBEAL2Q6ZNJ1 2754 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 C18orf65Q6ZTR6 163 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 C6orf48Q9UBA6 75 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 LCE6AA0A183 80 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 FP248Q71RG6 208 aaPredicted RBP2.77□□□□□ -1.97
SYNE2-204ENST00000358025 ATMQ13315 3056 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 PRR4Q16378 134 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 ITPR3Q14573 2671 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 MOBPQ13875 183 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 Q8N377 158 aa2.77□□□□□ -1.97
SYNE2-204ENST00000358025 NANOS2P60321 138 aaKnown RBP2.76□□□□□ -1.97
SYNE2-204ENST00000358025 IGLV7-46A0A075B6I9 117 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 CFAP46Q8IYW2 2715 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 SPAG11AQ6PDA7 123 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 WFDC10BQ8IUB3 73 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 KMT2BQ9UMN6 2715 aaPredicted RBP2.76□□□□□ -1.97
SYNE2-204ENST00000358025 IGLV8-61A0A075B6I0 122 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 C16orf90A8MZG2 172 aa2.76□□□□□ -1.97
SYNE2-204ENST00000358025 SMIM29Q86T20 159 aa2.75□□□□□ -1.97
SYNE2-204ENST00000358025 Q9UF83 564 aa2.75□□□□□ -1.97
SYNE2-204ENST00000358025 X6R8D5 127 aa2.75□□□□□ -1.97
SYNE2-204ENST00000358025 LINC00476Q8WZB0 136 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 A0A096LNT2 108 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 GIG44P09565 113 aaPredicted RBP2.74□□□□□ -1.97
SYNE2-204ENST00000358025 DEFB116Q30KQ4 102 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 IGLV9-49A0A0B4J1Y8 123 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 C3orf84H3BNL1 204 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 HELZ2Q9BYK8 2649 aaKnown RBP2.74□□□□□ -1.97
SYNE2-204ENST00000358025 A0A1B0GU69 56 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 APCP25054 2843 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 UQCR11O14957 56 aa2.74□□□□□ -1.97
SYNE2-204ENST00000358025 C19orf73Q9NVV2 129 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 A0A1W2PPR1 153 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 COA5Q86WW8 74 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 A8MUN3 132 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 CDSNQ15517 529 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 FAM229AH3BQW9 127 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 IGLV1-50A0A075B6I6 118 aa2.73□□□□□ -1.97
SYNE2-204ENST00000358025 C7orf33Q8WU49 177 aa2.72□□□□□ -1.97
SYNE2-204ENST00000358025 Q8NAQ8 132 aa2.72□□□□□ -1.97
SYNE2-204ENST00000358025 A0A087WSZ3 146 aa2.72□□□□□ -1.97
SYNE2-204ENST00000358025 SPRR1AP35321 89 aa2.72□□□□□ -1.97
SYNE2-204ENST00000358025 NF1P21359 2839 aa2.71□□□□□ -1.97
SYNE2-204ENST00000358025 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.97
SYNE2-204ENST00000358025 CNBPP62633 177 aaKnown RBP2.71□□□□□ -1.98
SYNE2-204ENST00000358025 CRYBG3Q68DQ2 2970 aa2.71□□□□□ -1.98
SYNE2-204ENST00000358025 PLA2G1BP04054 148 aaKnown RBP2.71□□□□□ -1.98
SYNE2-204ENST00000358025 ATRQ13535 2644 aa2.71□□□□□ -1.98
SYNE2-204ENST00000358025 UTP20O75691 2785 aaKnown RBP2.71□□□□□ -1.98
SYNE2-204ENST00000358025 NBEAL1Q6ZS30 2694 aa2.71□□□□□ -1.98
SYNE2-204ENST00000358025 H3BS24 57 aa2.71□□□□□ -1.98
SYNE2-204ENST00000358025 SSBP3-AS1Q7Z2R9 100 aa2.71□□□□□ -1.98
SYNE2-204ENST00000358025 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
SYNE2-204ENST00000358025 C9orf129Q5T035 196 aaKnown RBP2.7□□□□□ -1.98
SYNE2-204ENST00000358025 C15orf56Q8N910 161 aa2.7□□□□□ -1.98
SYNE2-204ENST00000358025 SPINK1P00995 79 aa2.7□□□□□ -1.98
SYNE2-204ENST00000358025 IGFL1Q6UW32 110 aa2.7□□□□□ -1.98
SYNE2-204ENST00000358025 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
SYNE2-204ENST00000358025 ZCCHC13Q8WW36 166 aaKnown RBP2.7□□□□□ -1.98
SYNE2-204ENST00000358025 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
SYNE2-204ENST00000358025 UNC79Q9P2D8 2635 aa2.69□□□□□ -1.98
SYNE2-204ENST00000358025 SEC61BP60468 96 aaKnown RBP2.69□□□□□ -1.98
SYNE2-204ENST00000358025 Q8N9P0 234 aaPredicted RBP2.69□□□□□ -1.98
SYNE2-204ENST00000358025 UBR5O95071 2799 aaPredicted RBP2.69□□□□□ -1.98
SYNE2-204ENST00000358025 DSCR10P59022 87 aa2.69□□□□□ -1.98
SYNE2-204ENST00000358025 DCHS2Q6V1P9 2916 aa2.69□□□□□ -1.98
SYNE2-204ENST00000358025 NUPR2A6NF83 97 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 SPRR1BP22528 89 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 MXRA5Q9NR99 2828 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 FLNAP21333 2647 aaKnown RBP2.68□□□□□ -1.98
SYNE2-204ENST00000358025 KRTAP10-9P60411 292 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 CELSR2Q9HCU4 2923 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 A0A1W2PNM2 257 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 K7EQZ3 153 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 LINC00313P59037 77 aa2.68□□□□□ -1.98
SYNE2-204ENST00000358025 A0A1B0GVX0 72 aa2.67□□□□□ -1.98
SYNE2-204ENST00000358025 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
SYNE2-204ENST00000358025 UNC80Q8N2C7 3258 aa2.67□□□□□ -1.98
SYNE2-204ENST00000358025 NSD1Q96L73 2696 aaPredicted RBP2.67□□□□□ -1.98
SYNE2-204ENST00000358025 OXTP01178 125 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms