RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NKAPP1Q8N9T2 125 aa16■□□□□ 0.15
CPNE1-202ENST00000352393 TM2D3Q9BRN9 247 aa15.99■□□□□ 0.15
CPNE1-202ENST00000352393 FLNBO75369 2602 aaKnown RBP15.98■□□□□ 0.15
CPNE1-202ENST00000352393 PKD1L1Q8TDX9 2849 aa15.98■□□□□ 0.15
CPNE1-202ENST00000352393 DEFB131BA0A096LNP1 70 aa15.97■□□□□ 0.15
CPNE1-202ENST00000352393 SNURFQ9Y675 71 aa15.97■□□□□ 0.15
CPNE1-202ENST00000352393 RMI2Q96E14 147 aa15.97■□□□□ 0.15
CPNE1-202ENST00000352393 C5orf47Q569G3 176 aa15.95■□□□□ 0.14
CPNE1-202ENST00000352393 EPM2AB3EWF7 344 aa15.95■□□□□ 0.14
CPNE1-202ENST00000352393 Q5XG85 94 aa15.95■□□□□ 0.14
CPNE1-202ENST00000352393 Q8N377 158 aa15.95■□□□□ 0.14
CPNE1-202ENST00000352393 IGKV4-1P06312 121 aa15.94■□□□□ 0.14
CPNE1-202ENST00000352393 TLX1NBP0CAT3 122 aa15.94■□□□□ 0.14
CPNE1-202ENST00000352393 DNAH10OSP0CZ25 163 aa15.94■□□□□ 0.14
CPNE1-202ENST00000352393 PLA2G2DQ9UNK4 145 aa15.94■□□□□ 0.14
CPNE1-202ENST00000352393 TENM3Q9P273 2699 aa15.93■□□□□ 0.14
CPNE1-202ENST00000352393 NREPQ16612 68 aa15.93■□□□□ 0.14
CPNE1-202ENST00000352393 IGLV5-48A0A075B6I7 105 aa15.92■□□□□ 0.14
CPNE1-202ENST00000352393 BPY2O14599 106 aa15.92■□□□□ 0.14
CPNE1-202ENST00000352393 Q8N9L7 120 aa15.92■□□□□ 0.14
CPNE1-202ENST00000352393 C11orf45Q8TAV5 145 aa15.91■□□□□ 0.14
CPNE1-202ENST00000352393 SERP1Q9Y6X1 66 aa15.91■□□□□ 0.14
CPNE1-202ENST00000352393 DEFB105AQ8NG35 78 aa15.9■□□□□ 0.14
CPNE1-202ENST00000352393 F8WEM9 126 aa15.89■□□□□ 0.13
CPNE1-202ENST00000352393 KRTAP4-16G5E9R7 235 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-202ENST00000352393 Q6ZRX8 168 aa15.89■□□□□ 0.13
CPNE1-202ENST00000352393 C3orf84H3BNL1 204 aa15.88■□□□□ 0.13
CPNE1-202ENST00000352393 DHRS4-AS1Q9P1J3 65 aa15.88■□□□□ 0.13
CPNE1-202ENST00000352393 IGLV5-37A0A075B6J1 123 aa15.88■□□□□ 0.13
CPNE1-202ENST00000352393 PRYO14603 147 aa15.86■□□□□ 0.13
CPNE1-202ENST00000352393 NDUFC1O43677 76 aa15.86■□□□□ 0.13
CPNE1-202ENST00000352393 ERC2-IT1O76042 136 aa15.86■□□□□ 0.13
CPNE1-202ENST00000352393 C4orf26Q17RF5 130 aa15.85■□□□□ 0.13
CPNE1-202ENST00000352393 Q9BRP9 147 aa15.85■□□□□ 0.13
CPNE1-202ENST00000352393 SPRR1AP35321 89 aa15.85■□□□□ 0.13
CPNE1-202ENST00000352393 IGLV1-50A0A075B6I6 118 aa15.84■□□□□ 0.13
CPNE1-202ENST00000352393 FAM168BA1KXE4 195 aa15.83■□□□□ 0.13
CPNE1-202ENST00000352393 MRAPQ8TCY5 172 aa15.83■□□□□ 0.13
CPNE1-202ENST00000352393 RPL37AP8A6NKH3 93 aa15.83■□□□□ 0.12
CPNE1-202ENST00000352393 TNP2Q05952 138 aa15.82■□□□□ 0.12
CPNE1-202ENST00000352393 TMEM254Q8TBM7 123 aa15.82■□□□□ 0.12
CPNE1-202ENST00000352393 OCR1Q9BZK8 76 aa15.82■□□□□ 0.12
CPNE1-202ENST00000352393 A0A1B0GW54 56 aa15.8■□□□□ 0.12
CPNE1-202ENST00000352393 CASC10Q5T4H9 136 aa15.8■□□□□ 0.12
CPNE1-202ENST00000352393 KRTAP7-1Q8IUC3 87 aa15.8■□□□□ 0.12
CPNE1-202ENST00000352393 ANK2Q01484 3957 aa15.8■□□□□ 0.12
CPNE1-202ENST00000352393 A0A1W2PNM2 257 aa15.79■□□□□ 0.12
CPNE1-202ENST00000352393 ETDCA0A1B0GVM5 59 aa15.79■□□□□ 0.12
CPNE1-202ENST00000352393 FUSP35637 526 aaKnown RBP eCLIP15.79■□□□□ 0.121e-10■■□□□ 12.2
CPNE1-202ENST00000352393 LINC00588Q9Y4M8 146 aa15.78■□□□□ 0.12
CPNE1-202ENST00000352393 F8P00451 2351 aa15.77■□□□□ 0.12
CPNE1-202ENST00000352393 KRTAP24-1Q3LI83 254 aa15.77■□□□□ 0.11
CPNE1-202ENST00000352393 HRCT1Q6UXD1 115 aa15.76■□□□□ 0.11
CPNE1-202ENST00000352393 ATP5EP56381 51 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-202ENST00000352393 ST20-AS1Q8NBB2 130 aa15.76■□□□□ 0.11
CPNE1-202ENST00000352393 CMYA5Q8N3K9 4069 aa15.75■□□□□ 0.11
CPNE1-202ENST00000352393 C1orf137Q5JT78 98 aa15.74■□□□□ 0.11
CPNE1-202ENST00000352393 DNAH1Q9P2D7 4330 aa15.74■□□□□ 0.11
CPNE1-202ENST00000352393 Q8NBF4 154 aa15.73■□□□□ 0.11
CPNE1-202ENST00000352393 A0A0U1RQV1 116 aa15.73■□□□□ 0.11
CPNE1-202ENST00000352393 DNAH3Q8TD57 4116 aa15.72■□□□□ 0.11
CPNE1-202ENST00000352393 MRPL55Q7Z7F7 128 aaKnown RBP15.71■□□□□ 0.11
CPNE1-202ENST00000352393 SPRR4Q96PI1 79 aa15.7■□□□□ 0.1
CPNE1-202ENST00000352393 SMIM26A0A096LP01 95 aa15.65■□□□□ 0.1
CPNE1-202ENST00000352393 SMIM29Q86T20 159 aa15.65■□□□□ 0.1
CPNE1-202ENST00000352393 UBE2BP63146 152 aa15.63■□□□□ 0.09
CPNE1-202ENST00000352393 FP248Q71RG6 208 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-202ENST00000352393 REG3GQ6UW15 175 aa15.61■□□□□ 0.09
CPNE1-202ENST00000352393 DSCR10P59022 87 aa15.6■□□□□ 0.09
CPNE1-202ENST00000352393 STAB1Q9NY15 2570 aa15.59■□□□□ 0.09
CPNE1-202ENST00000352393 LCE6AA0A183 80 aa15.59■□□□□ 0.09
CPNE1-202ENST00000352393 HIGD2AQ9BW72 106 aa15.59■□□□□ 0.09
CPNE1-202ENST00000352393 FAM30AQ9NZY2 134 aa15.57■□□□□ 0.08
CPNE1-202ENST00000352393 FBN1P35555 2871 aaKnown RBP15.56■□□□□ 0.08
CPNE1-202ENST00000352393 LINC00476Q8WZB0 136 aa15.55■□□□□ 0.08
CPNE1-202ENST00000352393 K7EQZ3 153 aa15.53■□□□□ 0.08
CPNE1-202ENST00000352393 MAST4O15021 2626 aa15.52■□□□□ 0.07
CPNE1-202ENST00000352393 LINC00474Q9P2X8 69 aa15.51■□□□□ 0.07
CPNE1-202ENST00000352393 PRB2P02812 416 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-202ENST00000352393 A0A096LNI7 61 aa15.48■□□□□ 0.07
CPNE1-202ENST00000352393 IGFL1Q6UW32 110 aa15.48■□□□□ 0.07
CPNE1-202ENST00000352393 NOTCH1P46531 2555 aa15.48■□□□□ 0.07
CPNE1-202ENST00000352393 HUWE1Q7Z6Z7 4374 aaKnown RBP15.46■□□□□ 0.07
CPNE1-202ENST00000352393 A0A0G2JQZ4 141 aa15.45■□□□□ 0.06
CPNE1-202ENST00000352393 A0A1W2PNN7 141 aa15.45■□□□□ 0.06
CPNE1-202ENST00000352393 C16orf90A8MZG2 172 aa15.45■□□□□ 0.06
CPNE1-202ENST00000352393 FAM229BQ4G0N7 80 aa15.45■□□□□ 0.06
CPNE1-202ENST00000352393 IGLV8-61A0A075B6I0 122 aa15.44■□□□□ 0.06
CPNE1-202ENST00000352393 PRLHP81277 87 aa15.44■□□□□ 0.06
CPNE1-202ENST00000352393 ZCCHC13Q8WW36 166 aaKnown RBP15.44■□□□□ 0.06
CPNE1-202ENST00000352393 CNBPP62633 177 aaKnown RBP15.43■□□□□ 0.06
CPNE1-202ENST00000352393 KRTAP1-5Q9BYS1 174 aa15.43■□□□□ 0.06
CPNE1-202ENST00000352393 HCG22E2RYF7 251 aa15.43■□□□□ 0.06
CPNE1-202ENST00000352393 PSCAO43653 123 aa15.42■□□□□ 0.06
CPNE1-202ENST00000352393 LINC00336Q6ZUF6 198 aa15.42■□□□□ 0.06
CPNE1-202ENST00000352393 IGKV2-24A0A0C4DH68 120 aa15.41■□□□□ 0.06
CPNE1-202ENST00000352393 K7EIL1 84 aa15.41■□□□□ 0.06
CPNE1-202ENST00000352393 A0A087WSZ3 146 aa15.34■□□□□ 0.05
CPNE1-202ENST00000352393 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-202ENST00000352393 PRO0628Q9UI54 55 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms