RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TCL1BO95988 128 aa10.15□□□□□ -0.78
RAB5C-201ENST00000346213 DMBT1Q9UGM3 2413 aaPredicted RBP10.15□□□□□ -0.78
RAB5C-201ENST00000346213 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.79
RAB5C-201ENST00000346213 A0A087WYN8 130 aa10.15□□□□□ -0.79
RAB5C-201ENST00000346213 A0A096LNI7 61 aa10.15□□□□□ -0.79
RAB5C-201ENST00000346213 ZNF561-AS1K7EIQ3 104 aa10.15□□□□□ -0.79
RAB5C-201ENST00000346213 IGKV2D-28P01615 120 aa10.15□□□□□ -0.79
RAB5C-201ENST00000346213 C9orf116Q5BN46 136 aaPredicted RBP10.15□□□□□ -0.79
RAB5C-201ENST00000346213 F8WDY8 70 aa10.14□□□□□ -0.79
RAB5C-201ENST00000346213 COX6CP09669 75 aa10.14□□□□□ -0.79
RAB5C-201ENST00000346213 C2orf48Q96LS8 159 aa10.14□□□□□ -0.79
RAB5C-201ENST00000346213 MT-ATP8P03928 68 aa10.13□□□□□ -0.79
RAB5C-201ENST00000346213 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
RAB5C-201ENST00000346213 LINC00337Q8N6G1 96 aa10.12□□□□□ -0.79
RAB5C-201ENST00000346213 IGKV2-24A0A0C4DH68 120 aa10.12□□□□□ -0.79
RAB5C-201ENST00000346213 NDUFC2O95298 119 aa10.12□□□□□ -0.79
RAB5C-201ENST00000346213 Q6ZRU5 148 aa10.12□□□□□ -0.79
RAB5C-201ENST00000346213 C6orf48Q9UBA6 75 aa10.12□□□□□ -0.79
RAB5C-201ENST00000346213 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
RAB5C-201ENST00000346213 CAMK2N2Q96S95 79 aa10.11□□□□□ -0.79
RAB5C-201ENST00000346213 PLAC8Q9NZF1 115 aa10.11□□□□□ -0.79
RAB5C-201ENST00000346213 RPL37AP61513 92 aaKnown RBP10.09□□□□□ -0.79
RAB5C-201ENST00000346213 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
RAB5C-201ENST00000346213 CARD19Q96LW7 228 aa10.09□□□□□ -0.79
RAB5C-201ENST00000346213 SMCPP49901 116 aaPredicted RBP10.09□□□□□ -0.79
RAB5C-201ENST00000346213 SS18L2Q9UHA2 77 aa10.09□□□□□ -0.79
RAB5C-201ENST00000346213 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
RAB5C-201ENST00000346213 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
RAB5C-201ENST00000346213 GAGE2BQ13066 116 aa10.07□□□□□ -0.8
RAB5C-201ENST00000346213 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
RAB5C-201ENST00000346213 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
RAB5C-201ENST00000346213 LST1O00453 97 aa10.06□□□□□ -0.8
RAB5C-201ENST00000346213 SNCGO76070 127 aa10.06□□□□□ -0.8
RAB5C-201ENST00000346213 KRTAP29-1A8MX34 341 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-201ENST00000346213 NDUFV3P56181 108 aaKnown RBP10.05□□□□□ -0.8
RAB5C-201ENST00000346213 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
RAB5C-201ENST00000346213 B5MCH6 92 aa10.04□□□□□ -0.8
RAB5C-201ENST00000346213 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
RAB5C-201ENST00000346213 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
RAB5C-201ENST00000346213 OR13C6PQ8NH95 151 aa10.03□□□□□ -0.8
RAB5C-201ENST00000346213 A0A1W2PNN7 141 aa10.02□□□□□ -0.8
RAB5C-201ENST00000346213 C9JAW5 83 aa10.02□□□□□ -0.8
RAB5C-201ENST00000346213 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.8
RAB5C-201ENST00000346213 Q8NDZ9 215 aa10.02□□□□□ -0.8
RAB5C-201ENST00000346213 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
RAB5C-201ENST00000346213 DPH3Q96FX2 82 aa10.02□□□□□ -0.81
RAB5C-201ENST00000346213 SLC25A20O43772 301 aa10.01□□□□□ -0.81
RAB5C-201ENST00000346213 HMCN2Q8NDA2 5059 aa10.01□□□□□ -0.81
RAB5C-201ENST00000346213 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
RAB5C-201ENST00000346213 H0YGX0 51 aa9.99□□□□□ -0.81
RAB5C-201ENST00000346213 TNXBP22105 4242 aa9.99□□□□□ -0.81
RAB5C-201ENST00000346213 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
RAB5C-201ENST00000346213 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
RAB5C-201ENST00000346213 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
RAB5C-201ENST00000346213 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
RAB5C-201ENST00000346213 NCR3O14931 201 aa9.98□□□□□ -0.81
RAB5C-201ENST00000346213 TRACP01848 142 aa9.98□□□□□ -0.81
RAB5C-201ENST00000346213 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
RAB5C-201ENST00000346213 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
RAB5C-201ENST00000346213 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
RAB5C-201ENST00000346213 FAM168BA1KXE4 195 aa9.96□□□□□ -0.81
RAB5C-201ENST00000346213 H3BT86 120 aa9.96□□□□□ -0.81
RAB5C-201ENST00000346213 Q6ZRP5 223 aa9.96□□□□□ -0.81
RAB5C-201ENST00000346213 J3QL48 77 aa9.96□□□□□ -0.82
RAB5C-201ENST00000346213 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.82
RAB5C-201ENST00000346213 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.82
RAB5C-201ENST00000346213 FAM218AQ96MZ4 157 aa9.96□□□□□ -0.82
RAB5C-201ENST00000346213 FAM240AA0A1B0GVK7 77 aa9.95□□□□□ -0.82
RAB5C-201ENST00000346213 IGLV6-57P01721 117 aa9.95□□□□□ -0.82
RAB5C-201ENST00000346213 VPREB1P12018 145 aa9.95□□□□□ -0.82
RAB5C-201ENST00000346213 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
RAB5C-201ENST00000346213 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
RAB5C-201ENST00000346213 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
RAB5C-201ENST00000346213 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
RAB5C-201ENST00000346213 CCDC179H3BU77 68 aa9.91□□□□□ -0.82
RAB5C-201ENST00000346213 M0R378 163 aa9.91□□□□□ -0.82
RAB5C-201ENST00000346213 OXTP01178 125 aa9.91□□□□□ -0.82
RAB5C-201ENST00000346213 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
RAB5C-201ENST00000346213 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
RAB5C-201ENST00000346213 A0A1B0GX51 115 aa9.9□□□□□ -0.82
RAB5C-201ENST00000346213 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
RAB5C-201ENST00000346213 TRBV10-3A0A0K0K1G6 114 aa9.9□□□□□ -0.83
RAB5C-201ENST00000346213 TRBV7-7A0A0K0K1E9 115 aa9.89□□□□□ -0.83
RAB5C-201ENST00000346213 C6orf99Q4VX62 202 aa9.89□□□□□ -0.83
RAB5C-201ENST00000346213 ACYP1P07311 99 aa9.88□□□□□ -0.83
RAB5C-201ENST00000346213 DNAL4O96015 105 aa9.87□□□□□ -0.83
RAB5C-201ENST00000346213 TRAV23DV6A0A075B6W5 121 aa9.87□□□□□ -0.83
RAB5C-201ENST00000346213 BAALC-AS2P0C853 105 aa9.87□□□□□ -0.83
RAB5C-201ENST00000346213 PSORS1C2Q9UIG4 136 aa9.87□□□□□ -0.83
RAB5C-201ENST00000346213 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
RAB5C-201ENST00000346213 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
RAB5C-201ENST00000346213 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
RAB5C-201ENST00000346213 PKIGQ9Y2B9 76 aa9.85□□□□□ -0.83
RAB5C-201ENST00000346213 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
RAB5C-201ENST00000346213 SERTAD4-AS1Q5TG53 156 aa9.84□□□□□ -0.83
RAB5C-201ENST00000346213 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
RAB5C-201ENST00000346213 DIRC1Q969H9 104 aa9.83□□□□□ -0.84
RAB5C-201ENST00000346213 TRBV7-6A0A0J9YX20 115 aa9.83□□□□□ -0.84
RAB5C-201ENST00000346213 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
RAB5C-201ENST00000346213 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms