RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 APLNQ9ULZ1 77 aa4.03□□□□□ -1.76
PRKDC-201ENST00000314191 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
PRKDC-201ENST00000314191 A0A1W2PNN7 141 aa4.02□□□□□ -1.77
PRKDC-201ENST00000314191 Q8N377 158 aa4.02□□□□□ -1.77
PRKDC-201ENST00000314191 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
PRKDC-201ENST00000314191 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
PRKDC-201ENST00000314191 Q8NBF4 154 aa4.02□□□□□ -1.77
PRKDC-201ENST00000314191 SPTBN5Q9NRC6 3674 aaKnown RBP4.01□□□□□ -1.77
PRKDC-201ENST00000314191 TLX1NBP0CAT3 122 aa4.01□□□□□ -1.77
PRKDC-201ENST00000314191 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
PRKDC-201ENST00000314191 CRYGAP11844 174 aa4.01□□□□□ -1.77
PRKDC-201ENST00000314191 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
PRKDC-201ENST00000314191 ERC2-IT1O76042 136 aa4□□□□□ -1.77
PRKDC-201ENST00000314191 C9orf163Q8N9P6 203 aa4□□□□□ -1.77
PRKDC-201ENST00000314191 TRBV7-4A0A0J9YYF1 115 aa4□□□□□ -1.77
PRKDC-201ENST00000314191 LINC01600Q96MT4 127 aa3.99□□□□□ -1.77
PRKDC-201ENST00000314191 GCN1Q92616 2671 aaKnown RBP3.99□□□□□ -1.77
PRKDC-201ENST00000314191 HCG22E2RYF7 251 aa3.99□□□□□ -1.77
PRKDC-201ENST00000314191 STAB1Q9NY15 2570 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 CD164Q04900 197 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 BAHCC1Q9P281 2608 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 NBEAL1Q6ZS30 2694 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 MAST4O15021 2626 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 MOBPQ13875 183 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 BCE1O60756 84 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 STAB2Q8WWQ8 2551 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 A0A087WTM6 91 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 A0A1W2PNM2 257 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 PLA2G2DQ9UNK4 145 aa3.98□□□□□ -1.77
PRKDC-201ENST00000314191 COL6A3P12111 3177 aa3.97□□□□□ -1.77
PRKDC-201ENST00000314191 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
PRKDC-201ENST00000314191 MGAM2Q2M2H8 2515 aa3.97□□□□□ -1.77
PRKDC-201ENST00000314191 IGFL1Q6UW32 110 aa3.96□□□□□ -1.77
PRKDC-201ENST00000314191 ATRQ13535 2644 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 TRIOO75962 3097 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 RETNLBQ9BQ08 111 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 NOTCH1P46531 2555 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 PCOTHQ58A44 107 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 A0A1B0GW54 56 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 K7EQZ3 153 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 KRTAP26-1Q6PEX3 210 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 PSPHP1O15172 72 aa3.96□□□□□ -1.78
PRKDC-201ENST00000314191 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
PRKDC-201ENST00000314191 H0Y9P7 68 aa3.95□□□□□ -1.78
PRKDC-201ENST00000314191 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
PRKDC-201ENST00000314191 MGAQ8IWI9 3026 aa3.95□□□□□ -1.78
PRKDC-201ENST00000314191 FREM2Q5SZK8 3169 aa3.94□□□□□ -1.78
PRKDC-201ENST00000314191 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
PRKDC-201ENST00000314191 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
PRKDC-201ENST00000314191 SPAG11AQ6PDA7 123 aa3.94□□□□□ -1.78
PRKDC-201ENST00000314191 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
PRKDC-201ENST00000314191 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
PRKDC-201ENST00000314191 OBSCN-AS1Q96MR7 158 aa3.94□□□□□ -1.78
PRKDC-201ENST00000314191 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
PRKDC-201ENST00000314191 IGLV5-48A0A075B6I7 105 aa3.93□□□□□ -1.78
PRKDC-201ENST00000314191 C4orf26Q17RF5 130 aa3.93□□□□□ -1.78
PRKDC-201ENST00000314191 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
PRKDC-201ENST00000314191 HELZ2Q9BYK8 2649 aaKnown RBP3.91□□□□□ -1.78
PRKDC-201ENST00000314191 UNC79Q9P2D8 2635 aa3.91□□□□□ -1.78
PRKDC-201ENST00000314191 ZNF861PO60384 105 aa3.9□□□□□ -1.78
PRKDC-201ENST00000314191 PSORS1C2Q9UIG4 136 aa3.9□□□□□ -1.78
PRKDC-201ENST00000314191 TNP2Q05952 138 aa3.9□□□□□ -1.79
PRKDC-201ENST00000314191 VPS13AQ96RL7 3174 aa3.9□□□□□ -1.79
PRKDC-201ENST00000314191 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.89□□□□□ -1.79
PRKDC-201ENST00000314191 REV3LO60673 3130 aa3.89□□□□□ -1.79
PRKDC-201ENST00000314191 CHD6Q8TD26 2715 aa3.89□□□□□ -1.79
PRKDC-201ENST00000314191 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
PRKDC-201ENST00000314191 CYP4F30PQ9H0H9 118 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 SPRR1AP35321 89 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 CFAP46Q8IYW2 2715 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 LAMA1P25391 3075 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 A8MWP4 228 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 SPRR4Q96PI1 79 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 SMR3BP02814 79 aaPredicted RBP3.88□□□□□ -1.79
PRKDC-201ENST00000314191 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
PRKDC-201ENST00000314191 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
PRKDC-201ENST00000314191 H3BPC8 53 aa3.87□□□□□ -1.79
PRKDC-201ENST00000314191 TRAV22A0A0B4J277 110 aa3.87□□□□□ -1.79
PRKDC-201ENST00000314191 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 ZNF292O60281 2723 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 KLKP1Q107X0 134 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 PLA2G1BP04054 148 aaKnown RBP3.86□□□□□ -1.79
PRKDC-201ENST00000314191 FLNBO75369 2602 aaKnown RBP3.86□□□□□ -1.79
PRKDC-201ENST00000314191 CFAP54Q96N23 3096 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 ATP11AUNQ6ZP68 121 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
PRKDC-201ENST00000314191 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
PRKDC-201ENST00000314191 MUC3AQ02505 3323 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 IGKV2-30P06310 120 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 DSCR10P59022 87 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 MAP1AP78559 2803 aaPredicted RBP3.85□□□□□ -1.79
PRKDC-201ENST00000314191 COL6A5A8TX70 2615 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 PANO1I0J062 215 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 LINC00313P59037 77 aa3.85□□□□□ -1.79
PRKDC-201ENST00000314191 UTP20O75691 2785 aaKnown RBP3.84□□□□□ -1.79
PRKDC-201ENST00000314191 SPINK1P00995 79 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms