RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NTM-AS1Q6ZSK4 140 aa4.15□□□□□ -1.75
SEC22A-201ENST00000309934 MIR7-3HGQ8N6C7 128 aa4.15□□□□□ -1.75
SEC22A-201ENST00000309934 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.75
SEC22A-201ENST00000309934 KLKP1Q107X0 134 aa4.15□□□□□ -1.75
SEC22A-201ENST00000309934 BCE1O60756 84 aa4.14□□□□□ -1.75
SEC22A-201ENST00000309934 SYCNQ0VAF6 134 aa4.14□□□□□ -1.75
SEC22A-201ENST00000309934 CLPSL2Q6UWE3 100 aa4.14□□□□□ -1.75
SEC22A-201ENST00000309934 MGAQ8IWI9 3026 aa4.14□□□□□ -1.75
SEC22A-201ENST00000309934 PDE6GP18545 87 aa4.14□□□□□ -1.75
SEC22A-201ENST00000309934 TRAV22A0A0B4J277 110 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 C3orf84H3BNL1 204 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 KRTAP10-11P60412 298 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
SEC22A-201ENST00000309934 DNAH10OSP0CZ25 163 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 FAM30AQ9NZY2 134 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 IGLV10-54A0A075B6I4 117 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 TRBV10-3A0A0K0K1G6 114 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 C9orf116Q5BN46 136 aaPredicted RBP4.13□□□□□ -1.75
SEC22A-201ENST00000309934 IGLV4-60A0A075B6I1 120 aa4.13□□□□□ -1.75
SEC22A-201ENST00000309934 DIRC1Q969H9 104 aa4.12□□□□□ -1.75
SEC22A-201ENST00000309934 K7EIL1 84 aa4.12□□□□□ -1.75
SEC22A-201ENST00000309934 MGAM2Q2M2H8 2515 aa4.11□□□□□ -1.75
SEC22A-201ENST00000309934 PRR34Q9NV39 138 aa4.11□□□□□ -1.75
SEC22A-201ENST00000309934 STAB1Q9NY15 2570 aa4.11□□□□□ -1.75
SEC22A-201ENST00000309934 NOTCH1P46531 2555 aa4.11□□□□□ -1.75
SEC22A-201ENST00000309934 UBR5O95071 2799 aaPredicted RBP4.11□□□□□ -1.75
SEC22A-201ENST00000309934 HIGD2AQ9BW72 106 aa4.1□□□□□ -1.75
SEC22A-201ENST00000309934 COX6A2Q02221 97 aa4.1□□□□□ -1.75
SEC22A-201ENST00000309934 TSPEAR-AS2P59090 65 aa4.1□□□□□ -1.75
SEC22A-201ENST00000309934 SPAG11AQ6PDA7 123 aa4.1□□□□□ -1.75
SEC22A-201ENST00000309934 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
SEC22A-201ENST00000309934 ETDCA0A1B0GVM5 59 aa4.1□□□□□ -1.75
SEC22A-201ENST00000309934 HIGD2BQ4VC39 106 aa4.1□□□□□ -1.75
SEC22A-201ENST00000309934 DMXL2Q8TDJ6 3036 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 CSMD2Q7Z408 3487 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 COX7BP24311 80 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 LINC00588Q9Y4M8 146 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 DNAH8Q96JB1 4490 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 J3QL48 77 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
SEC22A-201ENST00000309934 CYSRT1A8MQ03 144 aa4.09□□□□□ -1.76
SEC22A-201ENST00000309934 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.76
SEC22A-201ENST00000309934 MUC4Q99102 2169 aa4.08□□□□□ -1.76
SEC22A-201ENST00000309934 LINC01547P58512 204 aaPredicted RBP4.08□□□□□ -1.76
SEC22A-201ENST00000309934 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
SEC22A-201ENST00000309934 DNAH9Q9NYC9 4486 aa4.08□□□□□ -1.76
SEC22A-201ENST00000309934 WFDC10BQ8IUB3 73 aa4.08□□□□□ -1.76
SEC22A-201ENST00000309934 ADGRG4Q8IZF6 3080 aa4.07□□□□□ -1.76
SEC22A-201ENST00000309934 NBEAQ8NFP9 2946 aa4.07□□□□□ -1.76
SEC22A-201ENST00000309934 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.06□□□□□ -1.76
SEC22A-201ENST00000309934 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
SEC22A-201ENST00000309934 Q1T7F1 81 aa4.06□□□□□ -1.76
SEC22A-201ENST00000309934 ZZEF1O43149 2961 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 FAM229BQ4G0N7 80 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 FLNAP21333 2647 aaKnown RBP4.05□□□□□ -1.76
SEC22A-201ENST00000309934 K7ERS5 55 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 LINC00313P59037 77 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 TLX1NBP0CAT3 122 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 COL6A5A8TX70 2615 aa4.05□□□□□ -1.76
SEC22A-201ENST00000309934 KMT2BQ9UMN6 2715 aaPredicted RBP4.05□□□□□ -1.76
SEC22A-201ENST00000309934 PKD1P98161 4303 aa4.04□□□□□ -1.76
SEC22A-201ENST00000309934 H0Y9J4 135 aa4.04□□□□□ -1.76
SEC22A-201ENST00000309934 SMIM11BQ8TCY0 68 aa4.04□□□□□ -1.76
SEC22A-201ENST00000309934 PLA2G2DQ9UNK4 145 aa4.04□□□□□ -1.76
SEC22A-201ENST00000309934 A0A087WYN8 130 aa4.04□□□□□ -1.76
SEC22A-201ENST00000309934 UNQ6190/PRO20217Q6UXQ8 127 aa4.04□□□□□ -1.76
SEC22A-201ENST00000309934 NBDYA0A0U1RRE5 68 aa4.03□□□□□ -1.76
SEC22A-201ENST00000309934 hDV103S1A0JD37 113 aa4.03□□□□□ -1.76
SEC22A-201ENST00000309934 C1orf134Q5TEV5 83 aa4.03□□□□□ -1.76
SEC22A-201ENST00000309934 A0A1B0GW54 56 aa4.03□□□□□ -1.76
SEC22A-201ENST00000309934 LITAFQ99732 161 aa4.03□□□□□ -1.76
SEC22A-201ENST00000309934 LY6G6CO95867 125 aa4.03□□□□□ -1.76
SEC22A-201ENST00000309934 PHF5AQ7RTV0 110 aaKnown RBP4.03□□□□□ -1.76
SEC22A-201ENST00000309934 DNAH2Q9P225 4427 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 APLNQ9ULZ1 77 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 C16orf90A8MZG2 172 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 C7orf33Q8WU49 177 aa4.02□□□□□ -1.77
SEC22A-201ENST00000309934 ERC2-IT1O76042 136 aa4.01□□□□□ -1.77
SEC22A-201ENST00000309934 KIAA0087Q14695 138 aa4.01□□□□□ -1.77
SEC22A-201ENST00000309934 Q6ZRP5 223 aa4□□□□□ -1.77
SEC22A-201ENST00000309934 Q8N9L7 120 aa4□□□□□ -1.77
SEC22A-201ENST00000309934 NBEAL1Q6ZS30 2694 aa4□□□□□ -1.77
SEC22A-201ENST00000309934 C6orf48Q9UBA6 75 aa4□□□□□ -1.77
SEC22A-201ENST00000309934 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
SEC22A-201ENST00000309934 CNBPP62633 177 aaKnown RBP4□□□□□ -1.77
SEC22A-201ENST00000309934 DEFB105AQ8NG35 78 aa4□□□□□ -1.77
SEC22A-201ENST00000309934 LINC01600Q96MT4 127 aa3.99□□□□□ -1.77
SEC22A-201ENST00000309934 ASH1LQ9NR48 2969 aaKnown RBP3.99□□□□□ -1.77
SEC22A-201ENST00000309934 Q8N814 137 aa3.99□□□□□ -1.77
SEC22A-201ENST00000309934 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
SEC22A-201ENST00000309934 IGLV5-37A0A075B6J1 123 aa3.99□□□□□ -1.77
SEC22A-201ENST00000309934 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
SEC22A-201ENST00000309934 REG3GQ6UW15 175 aa3.99□□□□□ -1.77
SEC22A-201ENST00000309934 XAGE1AQ9HD64 81 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms