RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 LINC00846Q9NV44 126 aa10.16□□□□□ -0.78
LSM6-201ENST00000296581 LECT2O14960 151 aa10.14□□□□□ -0.79
LSM6-201ENST00000296581 RPL28P46779 137 aaKnown RBP10.14□□□□□ -0.79
LSM6-201ENST00000296581 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
LSM6-201ENST00000296581 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
LSM6-201ENST00000296581 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
LSM6-201ENST00000296581 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
LSM6-201ENST00000296581 XAGE1AQ9HD64 81 aa10.13□□□□□ -0.79
LSM6-201ENST00000296581 PSCAO43653 123 aa10.13□□□□□ -0.79
LSM6-201ENST00000296581 GHRHP01286 108 aa10.13□□□□□ -0.79
LSM6-201ENST00000296581 Q6ZRP5 223 aa10.12□□□□□ -0.79
LSM6-201ENST00000296581 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
LSM6-201ENST00000296581 FP248Q71RG6 208 aaPredicted RBP10.12□□□□□ -0.79
LSM6-201ENST00000296581 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
LSM6-201ENST00000296581 C14orf132Q9NPU4 83 aa10.12□□□□□ -0.79
LSM6-201ENST00000296581 C20orf197Q8N268 126 aa10.11□□□□□ -0.79
LSM6-201ENST00000296581 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
LSM6-201ENST00000296581 SMIM26A0A096LP01 95 aa10.1□□□□□ -0.79
LSM6-201ENST00000296581 NCR3O14931 201 aa10.1□□□□□ -0.79
LSM6-201ENST00000296581 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
LSM6-201ENST00000296581 H7BZZ5 65 aa10.09□□□□□ -0.79
LSM6-201ENST00000296581 VPREB1P12018 145 aa10.08□□□□□ -0.8
LSM6-201ENST00000296581 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
LSM6-201ENST00000296581 A0A0U1RQV1 116 aa10.08□□□□□ -0.8
LSM6-201ENST00000296581 CNBPP62633 177 aaKnown RBP10.08□□□□□ -0.8
LSM6-201ENST00000296581 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
LSM6-201ENST00000296581 DNAH10Q8IVF4 4471 aa10.07□□□□□ -0.8
LSM6-201ENST00000296581 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
LSM6-201ENST00000296581 Q6ZR54 194 aa10.07□□□□□ -0.8
LSM6-201ENST00000296581 BRK1Q8WUW1 75 aa10.07□□□□□ -0.8
LSM6-201ENST00000296581 TRAV23DV6A0A075B6W5 121 aa10.06□□□□□ -0.8
LSM6-201ENST00000296581 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
LSM6-201ENST00000296581 S100A7L2Q5SY68 101 aa10.05□□□□□ -0.8
LSM6-201ENST00000296581 M0R2N4 97 aa10.05□□□□□ -0.8
LSM6-201ENST00000296581 H0YGX0 51 aa10.04□□□□□ -0.8
LSM6-201ENST00000296581 TGP01266 2768 aa10.04□□□□□ -0.8
LSM6-201ENST00000296581 PLA2G2DQ9UNK4 145 aa10.03□□□□□ -0.8
LSM6-201ENST00000296581 M0R378 163 aa10.02□□□□□ -0.81
LSM6-201ENST00000296581 ATP5EP2Q5VTU8 51 aa10.02□□□□□ -0.81
LSM6-201ENST00000296581 TRBV10-3A0A0K0K1G6 114 aa10.01□□□□□ -0.81
LSM6-201ENST00000296581 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
LSM6-201ENST00000296581 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
LSM6-201ENST00000296581 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
LSM6-201ENST00000296581 A0A087WYN8 130 aa10□□□□□ -0.81
LSM6-201ENST00000296581 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
LSM6-201ENST00000296581 FAM19A1Q7Z5A9 133 aa10□□□□□ -0.81
LSM6-201ENST00000296581 IGLV5-37A0A075B6J1 123 aa9.99□□□□□ -0.81
LSM6-201ENST00000296581 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.99□□□□□ -0.81
LSM6-201ENST00000296581 LY6G6CO95867 125 aa9.99□□□□□ -0.81
LSM6-201ENST00000296581 C6orf99Q4VX62 202 aa9.99□□□□□ -0.81
LSM6-201ENST00000296581 KLKP1Q107X0 134 aa9.98□□□□□ -0.81
LSM6-201ENST00000296581 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.81
LSM6-201ENST00000296581 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.81
LSM6-201ENST00000296581 CCKP06307 115 aa9.96□□□□□ -0.81
LSM6-201ENST00000296581 Q8N814 137 aa9.96□□□□□ -0.81
LSM6-201ENST00000296581 NKAPP1Q8N9T2 125 aa9.96□□□□□ -0.81
LSM6-201ENST00000296581 DNAH6Q9C0G6 4158 aa9.96□□□□□ -0.81
LSM6-201ENST00000296581 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
LSM6-201ENST00000296581 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.82
LSM6-201ENST00000296581 C9orf163Q8N9P6 203 aa9.96□□□□□ -0.82
LSM6-201ENST00000296581 A0A087WTM6 91 aa9.95□□□□□ -0.82
LSM6-201ENST00000296581 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
LSM6-201ENST00000296581 KMT2AQ03164 3969 aa9.95□□□□□ -0.82
LSM6-201ENST00000296581 A0A096LNI7 61 aa9.95□□□□□ -0.82
LSM6-201ENST00000296581 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
LSM6-201ENST00000296581 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
LSM6-201ENST00000296581 RBM3P98179 157 aaKnown RBP9.94□□□□□ -0.82
LSM6-201ENST00000296581 F8WEM9 126 aa9.94□□□□□ -0.82
LSM6-201ENST00000296581 BCE1O60756 84 aa9.94□□□□□ -0.82
LSM6-201ENST00000296581 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
LSM6-201ENST00000296581 ZNF73O43830 326 aaPredicted RBP9.93□□□□□ -0.82
LSM6-201ENST00000296581 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
LSM6-201ENST00000296581 SNURFQ9Y675 71 aa9.93□□□□□ -0.82
LSM6-201ENST00000296581 LINC00167Q96N53 147 aa9.91□□□□□ -0.82
LSM6-201ENST00000296581 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
LSM6-201ENST00000296581 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
LSM6-201ENST00000296581 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.83
LSM6-201ENST00000296581 ATP5EP56381 51 aaPredicted RBP9.89□□□□□ -0.83
LSM6-201ENST00000296581 ELOF1P60002 83 aaKnown RBP9.89□□□□□ -0.83
LSM6-201ENST00000296581 MRPL55Q7Z7F7 128 aaKnown RBP9.89□□□□□ -0.83
LSM6-201ENST00000296581 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
LSM6-201ENST00000296581 COX7BP24311 80 aa9.88□□□□□ -0.83
LSM6-201ENST00000296581 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
LSM6-201ENST00000296581 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
LSM6-201ENST00000296581 A0A1W2PNN7 141 aa9.86□□□□□ -0.83
LSM6-201ENST00000296581 PRYO14603 147 aa9.86□□□□□ -0.83
LSM6-201ENST00000296581 NDUFC1O43677 76 aa9.86□□□□□ -0.83
LSM6-201ENST00000296581 CHTF8P0CG12 524 aa9.86□□□□□ -0.83
LSM6-201ENST00000296581 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
LSM6-201ENST00000296581 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
LSM6-201ENST00000296581 PMAIP1Q13794 54 aa9.85□□□□□ -0.83
LSM6-201ENST00000296581 FAM229BQ4G0N7 80 aa9.85□□□□□ -0.83
LSM6-201ENST00000296581 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
LSM6-201ENST00000296581 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
LSM6-201ENST00000296581 SPRR1AP35321 89 aa9.84□□□□□ -0.83
LSM6-201ENST00000296581 JMJD7-PLA2G4BH0Y9G9 81 aa9.84□□□□□ -0.83
LSM6-201ENST00000296581 RTL8CO15255 209 aa9.83□□□□□ -0.84
LSM6-201ENST00000296581 KRTAP4-16G5E9R7 235 aaPredicted RBP9.82□□□□□ -0.84
LSM6-201ENST00000296581 DNAH17Q9UFH2 4485 aa9.82□□□□□ -0.84
LSM6-201ENST00000296581 TNP2Q05952 138 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms