RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 LINC01600Q96MT4 127 aa15.7■□□□□ 0.1
SSBP4-201ENST00000270061 TRACP01848 142 aa15.69■□□□□ 0.1
SSBP4-201ENST00000270061 SMR3BP02814 79 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-201ENST00000270061 Q6ZSA8 131 aa15.68■□□□□ 0.1
SSBP4-201ENST00000270061 SLC25A20O43772 301 aa15.67■□□□□ 0.1
SSBP4-201ENST00000270061 FAM218AQ96MZ4 157 aa15.67■□□□□ 0.1
SSBP4-201ENST00000270061 TRBV10-3A0A0K0K1G6 114 aa15.67■□□□□ 0.1
SSBP4-201ENST00000270061 Q5VSD8 79 aa15.67■□□□□ 0.1
SSBP4-201ENST00000270061 IGLV5-37A0A075B6J1 123 aa15.66■□□□□ 0.1
SSBP4-201ENST00000270061 GAGE2BQ13066 116 aa15.66■□□□□ 0.1
SSBP4-201ENST00000270061 CBY1Q9Y3M2 126 aa15.64■□□□□ 0.1
SSBP4-201ENST00000270061 VPS13BQ7Z7G8 4022 aa15.64■□□□□ 0.09
SSBP4-201ENST00000270061 SERTAD4-AS1Q5TG53 156 aa15.64■□□□□ 0.09
SSBP4-201ENST00000270061 C6orf99Q4VX62 202 aa15.63■□□□□ 0.09
SSBP4-201ENST00000270061 SRRM2Q9UQ35 2752 aaKnown RBP15.63■□□□□ 0.09
SSBP4-201ENST00000270061 C9orf163Q8N9P6 203 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 TRAV23DV6A0A075B6W5 121 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 FAM229AH3BQW9 127 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 H3BT86 120 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 ANKRD29Q8N6D5 301 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 NKAPP1Q8N9T2 125 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 PKIGQ9Y2B9 76 aa15.62■□□□□ 0.09
SSBP4-201ENST00000270061 A0A1B0GX51 115 aa15.6■□□□□ 0.09
SSBP4-201ENST00000270061 ETDBQ3ZM63 59 aa15.6■□□□□ 0.09
SSBP4-201ENST00000270061 A0A087WYN8 130 aa15.59■□□□□ 0.09
SSBP4-201ENST00000270061 SCXQ7RTU7 201 aa15.57■□□□□ 0.08
SSBP4-201ENST00000270061 A0A096LNI7 61 aa15.57■□□□□ 0.08
SSBP4-201ENST00000270061 FAM168BA1KXE4 195 aa15.57■□□□□ 0.08
SSBP4-201ENST00000270061 OCIAD2Q56VL3 154 aa15.57■□□□□ 0.08
SSBP4-201ENST00000270061 KRTAP7-1Q8IUC3 87 aa15.57■□□□□ 0.08
SSBP4-201ENST00000270061 C7orf33Q8WU49 177 aa15.57■□□□□ 0.08
SSBP4-201ENST00000270061 TRBV7-6A0A0J9YX20 115 aa15.56■□□□□ 0.08
SSBP4-201ENST00000270061 TEN1Q86WV5 123 aa15.56■□□□□ 0.08
SSBP4-201ENST00000270061 DIRC1Q969H9 104 aa15.56■□□□□ 0.08
SSBP4-201ENST00000270061 ZNF73O43830 326 aaPredicted RBP15.55■□□□□ 0.08
SSBP4-201ENST00000270061 KCNQ1DNQ9H478 68 aa15.54■□□□□ 0.08
SSBP4-201ENST00000270061 C22orf24Q9Y442 160 aa15.54■□□□□ 0.08
SSBP4-201ENST00000270061 DNAL4O96015 105 aa15.53■□□□□ 0.08
SSBP4-201ENST00000270061 INAFM2P0DMQ5 153 aa15.53■□□□□ 0.08
SSBP4-201ENST00000270061 LINC00575Q6W349 94 aa15.52■□□□□ 0.08
SSBP4-201ENST00000270061 SDIM1Q6ZPB5 146 aa15.52■□□□□ 0.07
SSBP4-201ENST00000270061 LINC00167Q96N53 147 aa15.52■□□□□ 0.07
SSBP4-201ENST00000270061 SNCGO76070 127 aa15.51■□□□□ 0.07
SSBP4-201ENST00000270061 CIRBP-AS1Q8TBR5 109 aa15.51■□□□□ 0.07
SSBP4-201ENST00000270061 FLG2Q5D862 2391 aaPredicted RBP15.5■□□□□ 0.07
SSBP4-201ENST00000270061 LINC00528Q8N1L1 170 aa15.5■□□□□ 0.07
SSBP4-201ENST00000270061 K7ERU9 68 aa15.49■□□□□ 0.07
SSBP4-201ENST00000270061 BAALC-AS2P0C853 105 aa15.49■□□□□ 0.07
SSBP4-201ENST00000270061 FAM19A5Q7Z5A7 132 aaPredicted RBP15.49■□□□□ 0.07
SSBP4-201ENST00000270061 MRPL55Q7Z7F7 128 aaKnown RBP15.49■□□□□ 0.07
SSBP4-201ENST00000270061 IGLV1-50A0A075B6I6 118 aa15.49■□□□□ 0.07
SSBP4-201ENST00000270061 IGKV2-24A0A0C4DH68 120 aa15.49■□□□□ 0.07
SSBP4-201ENST00000270061 ELOF1P60002 83 aaKnown RBP15.49■□□□□ 0.07
SSBP4-201ENST00000270061 COX7BP24311 80 aa15.47■□□□□ 0.07
SSBP4-201ENST00000270061 LINC00474Q9P2X8 69 aa15.47■□□□□ 0.07
SSBP4-201ENST00000270061 PLA2G1BP04054 148 aaKnown RBP15.47■□□□□ 0.07
SSBP4-201ENST00000270061 PPDPFLQ8WWR9 84 aa15.47■□□□□ 0.07
SSBP4-201ENST00000270061 PRYO14603 147 aa15.46■□□□□ 0.07
SSBP4-201ENST00000270061 MYCBP2O75592 4640 aa15.45■□□□□ 0.06
SSBP4-201ENST00000270061 A0A1W2PNN7 141 aa15.45■□□□□ 0.06
SSBP4-201ENST00000270061 hADV29S1A0JD25 119 aa15.44■□□□□ 0.06
SSBP4-201ENST00000270061 ORMDL1Q9P0S3 153 aa15.43■□□□□ 0.06
SSBP4-201ENST00000270061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-201ENST00000270061 SPRR1AP35321 89 aa15.42■□□□□ 0.06
SSBP4-201ENST00000270061 RPL37AP8A6NKH3 93 aa15.41■□□□□ 0.06
SSBP4-201ENST00000270061 J3QR89 54 aa15.41■□□□□ 0.06
SSBP4-201ENST00000270061 CHTF8P0CG12 524 aa15.41■□□□□ 0.06
SSBP4-201ENST00000270061 DMBT1Q9UGM3 2413 aaPredicted RBP15.39■□□□□ 0.05
SSBP4-201ENST00000270061 PANO1I0J062 215 aa15.39■□□□□ 0.05
SSBP4-201ENST00000270061 KRTAP4-16G5E9R7 235 aaPredicted RBP15.39■□□□□ 0.05
SSBP4-201ENST00000270061 TEX49A0A1B0GTD5 131 aa15.37■□□□□ 0.05
SSBP4-201ENST00000270061 TMEM256-PLSCR3K7ERE1 68 aa15.35■□□□□ 0.05
SSBP4-201ENST00000270061 DPH3Q96FX2 82 aa15.35■□□□□ 0.05
SSBP4-201ENST00000270061 H3BQ85 93 aa15.34■□□□□ 0.05
SSBP4-201ENST00000270061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.34■□□□□ 0.05
SSBP4-201ENST00000270061 SPACA4Q8TDM5 124 aa15.34■□□□□ 0.05
SSBP4-201ENST00000270061 B5MCH6 92 aa15.33■□□□□ 0.04
SSBP4-201ENST00000270061 REG3GQ6UW15 175 aa15.32■□□□□ 0.04
SSBP4-201ENST00000270061 Q6ZRX8 168 aa15.31■□□□□ 0.04
SSBP4-201ENST00000270061 ETDCA0A1B0GVM5 59 aa15.31■□□□□ 0.04
SSBP4-201ENST00000270061 Q6ZQY7 126 aa15.31■□□□□ 0.04
SSBP4-201ENST00000270061 VPS25Q9BRG1 176 aa15.3■□□□□ 0.04
SSBP4-201ENST00000270061 GHRHP01286 108 aa15.29■□□□□ 0.04
SSBP4-201ENST00000270061 KRTAP10-4P60372 401 aaPredicted RBP15.29■□□□□ 0.04
SSBP4-201ENST00000270061 OBSCN-AS1Q96MR7 158 aa15.29■□□□□ 0.04
SSBP4-201ENST00000270061 PHF5AQ7RTV0 110 aaKnown RBP15.29■□□□□ 0.04
SSBP4-201ENST00000270061 DHRS4-AS1Q9P1J3 65 aa15.29■□□□□ 0.04
SSBP4-201ENST00000270061 RPL37AP61513 92 aaKnown RBP15.28■□□□□ 0.04
SSBP4-201ENST00000270061 HERC1Q15751 4861 aa15.28■□□□□ 0.04
SSBP4-201ENST00000270061 PLAC8Q9NZF1 115 aa15.24■□□□□ 0.03
SSBP4-201ENST00000270061 Q9BRP9 147 aa15.24■□□□□ 0.03
SSBP4-201ENST00000270061 UBE2BP63146 152 aa15.23■□□□□ 0.03
SSBP4-201ENST00000270061 JMJD7-PLA2G4BH0Y9G9 81 aa15.21■□□□□ 0.03
SSBP4-201ENST00000270061 KRTAP11-1Q8IUC1 163 aa15.2■□□□□ 0.02
SSBP4-201ENST00000270061 PKHD1L1Q86WI1 4243 aa15.19■□□□□ 0.02
SSBP4-201ENST00000270061 LRP1Q07954 4544 aaKnown RBP15.18■□□□□ 0.02
SSBP4-201ENST00000270061 J3QL48 77 aa15.16■□□□□ 0.02
SSBP4-201ENST00000270061 H0Y9J4 135 aa15.16■□□□□ 0.02
SSBP4-201ENST00000270061 FAM19A1Q7Z5A9 133 aa15.16■□□□□ 0.02
SSBP4-201ENST00000270061 FAM240AA0A1B0GVK7 77 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms